RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 C18orf15Q96N68 181 aa16.41■□□□□ 0.22
COL13A1-208ENST00000479733 SPCS1Q9Y6A9 102 aa16.41■□□□□ 0.22
COL13A1-208ENST00000479733 APOBEC3AP31941 199 aaPredicted RBP16.4■□□□□ 0.22
COL13A1-208ENST00000479733 OR1N2Q8NGR9 330 aa16.4■□□□□ 0.22
COL13A1-208ENST00000479733 MALRD1Q5VYJ5 2156 aa16.4■□□□□ 0.22
COL13A1-208ENST00000479733 CD40P25942 277 aa16.39■□□□□ 0.21
COL13A1-208ENST00000479733 C16orf54Q6UWD8 224 aa16.39■□□□□ 0.21
COL13A1-208ENST00000479733 ZNF414Q96IQ9 312 aa16.39■□□□□ 0.21
COL13A1-208ENST00000479733 TTTY13Q9BZ97 58 aa16.39■□□□□ 0.21
COL13A1-208ENST00000479733 DKK2Q9UBU2 259 aa16.39■□□□□ 0.21
COL13A1-208ENST00000479733 INSIG2Q9Y5U4 225 aa16.39■□□□□ 0.21
COL13A1-208ENST00000479733 GOSR1O95249 250 aa16.39■□□□□ 0.21
COL13A1-208ENST00000479733 NGBQ9NPG2 151 aa16.39■□□□□ 0.21
COL13A1-208ENST00000479733 JKAMPQ9P055 326 aa16.39■□□□□ 0.21
COL13A1-208ENST00000479733 NDUFB3O43676 98 aa16.39■□□□□ 0.21
COL13A1-208ENST00000479733 RPL24P83731 157 aaKnown RBP16.39■□□□□ 0.21
COL13A1-208ENST00000479733 HSD52Q0P140 79 aa16.39■□□□□ 0.21
COL13A1-208ENST00000479733 TRBV19A0A075B6N1 114 aa16.38■□□□□ 0.21
COL13A1-208ENST00000479733 MC5RP33032 325 aa16.38■□□□□ 0.21
COL13A1-208ENST00000479733 FBXL15Q9H469 300 aa16.38■□□□□ 0.21
COL13A1-208ENST00000479733 PPIAL4EA0A075B759 164 aa16.38■□□□□ 0.21
COL13A1-208ENST00000479733 FBLL1A6NHQ2 334 aaKnown RBP16.38■□□□□ 0.21
COL13A1-208ENST00000479733 PPIAL4FP0DN26 164 aa16.38■□□□□ 0.21
COL13A1-208ENST00000479733 LGALS7P47929 136 aa16.38■□□□□ 0.21
COL13A1-208ENST00000479733 ADAMTSL5Q6ZMM2 481 aa16.38■□□□□ 0.21
COL13A1-208ENST00000479733 MBD3L4A6NDZ8 208 aaPredicted RBP16.37■□□□□ 0.21
COL13A1-208ENST00000479733 MBD3L3A6NE82 208 aaPredicted RBP16.37■□□□□ 0.21
COL13A1-208ENST00000479733 MBD3L5A6NJ08 208 aaPredicted RBP16.37■□□□□ 0.21
COL13A1-208ENST00000479733 M0R296 226 aa16.37■□□□□ 0.21
COL13A1-208ENST00000479733 PLP1P60201 277 aa16.37■□□□□ 0.21
COL13A1-208ENST00000479733 MBD3L2Q8NHZ7 208 aaPredicted RBP16.37■□□□□ 0.21
COL13A1-208ENST00000479733 K7EQM0 130 aa16.37■□□□□ 0.21
COL13A1-208ENST00000479733 CT45A10P0DMU9 189 aa16.37■□□□□ 0.21
COL13A1-208ENST00000479733 PSG3Q16557 428 aa16.37■□□□□ 0.21
COL13A1-208ENST00000479733 DEFB109BQ30KR1 87 aa16.37■□□□□ 0.21
COL13A1-208ENST00000479733 IFI27L1Q96BM0 104 aa16.37■□□□□ 0.21
COL13A1-208ENST00000479733 SIGLEC9Q9Y336 463 aa16.37■□□□□ 0.21
COL13A1-208ENST00000479733 A0A1W2PPM0 123 aa16.36■□□□□ 0.21
COL13A1-208ENST00000479733 GCSHP23434 173 aa16.36■□□□□ 0.21
COL13A1-208ENST00000479733 LGALS9BQ3B8N2 356 aa16.36■□□□□ 0.21
COL13A1-208ENST00000479733 LGALS9CQ6DKI2 356 aa16.36■□□□□ 0.21
COL13A1-208ENST00000479733 ORMDL3Q8N138 153 aa16.36■□□□□ 0.21
COL13A1-208ENST00000479733 BCL6BQ8N143 479 aaPredicted RBP16.36■□□□□ 0.21
COL13A1-208ENST00000479733 CTSZQ9UBR2 303 aa16.36■□□□□ 0.21
COL13A1-208ENST00000479733 FAM215AQ9Y5M1 114 aa16.36■□□□□ 0.21
COL13A1-208ENST00000479733 K7EMI3 77 aa16.36■□□□□ 0.21
COL13A1-208ENST00000479733 IGKV1-17P01599 117 aa16.36■□□□□ 0.21
COL13A1-208ENST00000479733 HBDP02042 147 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 HOXB4P17483 251 aaPredicted RBP16.35■□□□□ 0.21
COL13A1-208ENST00000479733 FCGR2BP31994 310 aaPredicted RBP16.35■□□□□ 0.21
COL13A1-208ENST00000479733 SIGLEC15Q6ZMC9 328 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 ATMQ13315 3056 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 PLGLAQ15195 96 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 MRPL51Q4U2R6 128 aaKnown RBP16.35■□□□□ 0.21
COL13A1-208ENST00000479733 FAM104BQ5XKR9 115 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 TMEM75Q8N9X5 138 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 PRSS33Q8NF86 280 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 SCNM1Q9BWG6 230 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 TMEM14CQ9P0S9 112 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 TMEM189A5PLL7 270 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 C17orf100A8MU93 164 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 CKS2P33552 79 aa16.35■□□□□ 0.21
COL13A1-208ENST00000479733 NPYP01303 97 aa16.34■□□□□ 0.21
COL13A1-208ENST00000479733 PPP1R27Q86WC6 154 aa16.34■□□□□ 0.21
COL13A1-208ENST00000479733 OR9G4Q8NGQ1 327 aa16.34■□□□□ 0.21
COL13A1-208ENST00000479733 ABHD17AQ96GS6 310 aa16.34■□□□□ 0.21
COL13A1-208ENST00000479733 NPFFR1Q9GZQ6 430 aa16.34■□□□□ 0.21
COL13A1-208ENST00000479733 TEX22C9J3V5 150 aa16.34■□□□□ 0.21
COL13A1-208ENST00000479733 K7ERJ3 54 aa16.34■□□□□ 0.21
COL13A1-208ENST00000479733 IL4P05112 153 aa16.34■□□□□ 0.21
COL13A1-208ENST00000479733 IGHV1-8P0DP01 117 aa16.33■□□□□ 0.21
COL13A1-208ENST00000479733 FABP2P12104 132 aa16.33■□□□□ 0.21
COL13A1-208ENST00000479733 LOXP28300 417 aaPredicted RBP16.33■□□□□ 0.21
COL13A1-208ENST00000479733 TWIST1Q15672 202 aa16.33■□□□□ 0.21
COL13A1-208ENST00000479733 NEGR1Q7Z3B1 354 aa16.33■□□□□ 0.21
COL13A1-208ENST00000479733 NDUFS7O75251 213 aa16.33■□□□□ 0.2
COL13A1-208ENST00000479733 A0A1B0GW15 77 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 TMEM178BH3BS89 294 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 GNG7O60262 68 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 SAMD5Q5TGI4 173 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 OR4X2Q8NGF9 303 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 IGFBPL1Q8WX77 278 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 WNK2Q9Y3S1 2297 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 CNIH1O95406 144 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 ADIPOQQ15848 244 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 KLF17Q5JT82 389 aaPredicted RBP16.32■□□□□ 0.2
COL13A1-208ENST00000479733 LINC00311Q8N616 119 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 DPF1Q92782 380 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 I3L2K1 104 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 SH2D1AO60880 128 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 SHANK2-AS3Q9BTD1 123 aa16.32■□□□□ 0.2
COL13A1-208ENST00000479733 TTC28Q96AY4 2481 aa16.31■□□□□ 0.2
COL13A1-208ENST00000479733 IGKV2D-26A0A0A0MRZ7 120 aa16.31■□□□□ 0.2
COL13A1-208ENST00000479733 FXYD2P54710 66 aa16.31■□□□□ 0.2
COL13A1-208ENST00000479733 PVRIGQ6DKI7 326 aa16.31■□□□□ 0.2
COL13A1-208ENST00000479733 COL25A1Q9BXS0 654 aaPredicted RBP16.31■□□□□ 0.2
COL13A1-208ENST00000479733 IGKV2-40A0A087WW87 121 aaPredicted RBP16.31■□□□□ 0.2
COL13A1-208ENST00000479733 ZNF207O43670 478 aaKnown RBP16.31■□□□□ 0.2
COL13A1-208ENST00000479733 GAS8-AS1O95177 125 aa16.31■□□□□ 0.2
COL13A1-208ENST00000479733 IGKV2D-40P01614 121 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms