RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 DIAPH2-AS1Q14236 149 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 SLC25A48Q6ZT89 311 aaKnown RBP10.93□□□□□ -0.66
USP42-206ENST00000479544 PRR7Q8TB68 274 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 NEUROG1Q92886 237 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 TTTY13Q9BZ97 58 aa10.93□□□□□ -0.66
USP42-206ENST00000479544 NDUFB8O95169 186 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 IGHV1-46P01743 117 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 FAM71F2Q6NXP2 309 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 SCGB3A1Q96QR1 104 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 SLC25A2Q9BXI2 301 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 DLX6P56179 175 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 UBTD1Q9HAC8 227 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 TMEM238LA0A1B0GVL6 79 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 A6NJY4 79 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 WT1-ASQ06250 92 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 TPSG1Q9NRR2 321 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 TSSC4Q9Y5U2 329 aaPredicted RBP10.92□□□□□ -0.66
USP42-206ENST00000479544 A0A1W2PPI3 338 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 EMP1P54849 157 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 RASL11AQ6T310 242 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 C8orf46Q8TAG6 207 aa10.92□□□□□ -0.66
USP42-206ENST00000479544 GAGE13Q4V321 117 aa10.91□□□□□ -0.66
USP42-206ENST00000479544 RAXQ9Y2V3 346 aa10.91□□□□□ -0.66
USP42-206ENST00000479544 DNAH14Q0VDD8 3507 aa10.91□□□□□ -0.66
USP42-206ENST00000479544 C15orf65H3BRN8 121 aa10.91□□□□□ -0.66
USP42-206ENST00000479544 PCP2Q8IVA1 136 aa10.91□□□□□ -0.66
USP42-206ENST00000479544 IGKV1OR2-108A0A075B7D4 117 aa10.91□□□□□ -0.66
USP42-206ENST00000479544 SMAD7O15105 426 aaKnown RBP10.91□□□□□ -0.66
USP42-206ENST00000479544 GLMPQ8WWB7 406 aa10.91□□□□□ -0.66
USP42-206ENST00000479544 TMEM238C9JI98 176 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 DPM2O94777 84 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 HCFC1P51610 2035 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 H0YJW9 148 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 TRIOO75962 3097 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 IGKCP01834 107 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 CD300EQ496F6 205 aaPredicted RBP10.9□□□□□ -0.66
USP42-206ENST00000479544 TMEM200BQ69YZ2 307 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 RPRMLQ8N4K4 120 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 TM4SF5O14894 197 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 CNTFRP26992 372 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 Q8TCH9 128 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 C21orf62Q9NYP8 219 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 MSRB2Q9Y3D2 182 aa10.9□□□□□ -0.66
USP42-206ENST00000479544 IGHV3OR16-10A0A075B7F0 116 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 SS18L1O75177 396 aaPredicted RBP10.89□□□□□ -0.67
USP42-206ENST00000479544 CKS1BP61024 79 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 BSPH1Q075Z2 132 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 TTC32Q5I0X7 151 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 DEFB125Q8N687 156 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 OR9G4Q8NGQ1 327 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 TAX1BP3O14907 124 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 UTF1Q5T230 341 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 COL6A3P12111 3177 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 TLN2Q9Y4G6 2542 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.89□□□□□ -0.67
USP42-206ENST00000479544 BRWD1-AS2P59051 145 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 ANKRD39Q53RE8 183 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 C17orf100A8MU93 164 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 SPRNQ5BIV9 151 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 Q86TA4 180 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 TMEM158Q8WZ71 300 aa10.89□□□□□ -0.67
USP42-206ENST00000479544 TRAV40A0A0B4J280 105 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 DKK1O94907 266 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 COX8AP10176 69 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 Q6ZSR3 168 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 C17orf77Q96MU5 243 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 DKK2Q9UBU2 259 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 C9orf118A6NHY6 69 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 H3BMG7 143 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 NDUFS8O00217 210 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 ATP5LO75964 103 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 TOMM40O96008 361 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 RPS20P60866 119 aaKnown RBP10.88□□□□□ -0.67
USP42-206ENST00000479544 C8orf49Q96NF6 230 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 KMT2EQ8IZD2 1858 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 VPS13AQ96RL7 3174 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 IGHV3-64A0A075B6Q5 118 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 FABP5P3A8MUU1 101 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 LYPD2Q6UXB3 125 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 IGFBPL1Q8WX77 278 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 CHAC1Q9BUX1 264 aa10.88□□□□□ -0.67
USP42-206ENST00000479544 IGF2RP11717 2491 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 F2RL2O00254 374 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 RHOGP84095 191 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 PLA2G2CQ5R387 149 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 TMEM75Q8N9X5 138 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 LINC01560Q8TB33 94 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 PROP1O75360 226 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 Q6AWC8 147 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 CLEC2AQ6UVW9 174 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 C1orf122Q6ZSJ8 110 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 C11orf53Q8IXP5 236 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 TIMM23O14925 209 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 RBX1P62877 108 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 DGAT2L7PQ6IED9 249 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 LINC00527Q9UJ94 153 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 FREM2Q5SZK8 3169 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 TRAV8-2A0A0B4J237 113 aa10.87□□□□□ -0.67
USP42-206ENST00000479544 SH2D1AO60880 128 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms