RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 GNG13Q9P2W3 67 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 LAMTOR2Q9Y2Q5 125 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 OR2W1Q9Y3N9 320 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 PXMP4Q9Y6I8 212 aa5.1□□□□□ -1.59
VCP-205ENST00000479300 FAM24AA6NFZ4 105 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 CBY3A6NI87 242 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 F8W735 103 aaPredicted RBP5.09□□□□□ -1.59
VCP-205ENST00000479300 H0Y980 276 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 K7ERU9 68 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 FCGR3BO75015 233 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 PROP1O75360 226 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 IFNA5P01569 189 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 REG1AP05451 166 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 NBEAP1P0C6P0 100 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 OR9G9P0C7N8 305 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 GP9P14770 177 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 DUTP33316 252 aaKnown RBP5.09□□□□□ -1.59
VCP-205ENST00000479300 KIR2DS2P43631 304 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 NKX2-1P43699 371 aaPredicted RBP5.09□□□□□ -1.59
VCP-205ENST00000479300 PIGPP57054 158 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 LINC00205P59089 165 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 YPEL3P61236 119 aaPredicted RBP5.09□□□□□ -1.59
VCP-205ENST00000479300 ATP5G2Q06055 141 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 RNF151Q2KHN1 245 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 OCIAD2Q56VL3 154 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 Q6ZWC4 215 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 TMEM144Q7Z5S9 345 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 Q8N1Y9 231 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 STPG4Q8N801 248 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 OR1L6Q8NGR2 347 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 OR5C1Q8NGR4 320 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 OR4S2Q8NH73 311 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 PINX1Q96BK5 328 aaKnown RBP5.09□□□□□ -1.59
VCP-205ENST00000479300 HSD17B10Q99714 261 aaKnown RBP5.09□□□□□ -1.59
VCP-205ENST00000479300 TPSG1Q9NRR2 321 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 PEMTQ9UBM1 199 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 PEF1Q9UBV8 284 aaKnown RBP5.09□□□□□ -1.59
VCP-205ENST00000479300 PAM16Q9Y3D7 125 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 TRAPPC1Q9Y5R8 145 aa5.09□□□□□ -1.59
VCP-205ENST00000479300 FAM223BA6NKX1 122 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 ZFP92A6NM28 416 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 CEBPZOSA8MTT3 80 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 IGLV2-23P01705 113 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 APELAP0DMC3 54 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 IGLC2P0DOY2 106 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 IGLC3P0DOY3 106 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 SUMO1P63165 101 aaKnown RBP5.08□□□□□ -1.6
VCP-205ENST00000479300 SERF2P84101 59 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 CATR1Q13166 79 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 MSMO1Q15800 293 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 LCN12Q6JVE5 192 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 LYZL2Q7Z4W2 148 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 GTSCR1Q86UQ5 136 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 HAPLN4Q86UW8 402 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 FAM223AQ8IWN6 122 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 SRSF12Q8WXF0 261 aaKnown RBP5.08□□□□□ -1.6
VCP-205ENST00000479300 IL22RA2Q969J5 263 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 GPR146Q96CH1 333 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 MANBALQ9NQG1 85 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 C19orf73Q9NVV2 129 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 ZNF586Q9NXT0 402 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 ANXA10Q9UJ72 324 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 RPH3ALQ9UNE2 315 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 KIAA1109Q2LD37 5005 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 RYR1P21817 5038 aa5.08□□□□□ -1.6
VCP-205ENST00000479300 DNAH10Q8IVF4 4471 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 TRBV9A0A0B4J1U6 114 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 LINC00473A8K010 186 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 BRI3O95415 125 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 CRYGBP07316 175 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 SAA1P0DJI8 122 aaPredicted RBP5.07□□□□□ -1.6
VCP-205ENST00000479300 IGHV4-30-4P0DP06 118 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 SCGB1A1P11684 91 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 DEFA4P12838 97 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 S100GP29377 79 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 RPL27AP46776 148 aaKnown RBP5.07□□□□□ -1.6
VCP-205ENST00000479300 SYNJ2BPP57105 145 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 HERV-K104P61576 105 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 MEF2BQ02080 365 aaPredicted RBP5.07□□□□□ -1.6
VCP-205ENST00000479300 Q0VG73 95 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 SPATA45Q537H7 98 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 C16orf54Q6UWD8 224 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 Q6ZN92 141 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 TMEM256Q8N2U0 113 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 NECAP1Q8NC96 275 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 ZBTB34Q8NCN2 500 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 OR9G4Q8NGQ1 327 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 DYNLRB2Q8TF09 96 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 DDB2Q92466 427 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 TMEM56Q96MV1 263 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 TXN2Q99757 166 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 CST9LQ9H4G1 147 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 ZNF430Q9H8G1 570 aaPredicted RBP5.07□□□□□ -1.6
VCP-205ENST00000479300 TIMM9Q9Y5J7 89 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 TMEM56-RWDD3S4R434 201 aa5.07□□□□□ -1.6
VCP-205ENST00000479300 IGKV1D-8A0A087WSZ0 117 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 SRRM4A7MD48 611 aaKnown RBP5.06□□□□□ -1.6
VCP-205ENST00000479300 DIRC3C9JPN6 131 aa5.06□□□□□ -1.6
VCP-205ENST00000479300 EIF4EBP3O60516 100 aaPredicted RBP5.06□□□□□ -1.6
VCP-205ENST00000479300 HYPMO75409 117 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms