RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 TNFSF18Q9UNG2 199 aa15.01□□□□□ -0.01
VARS-224ENST00000479051 AGRNO00468 2067 aa15.01□□□□□ -0.01
VARS-224ENST00000479051 TENM3Q9P273 2699 aa15□□□□□ -0.01
VARS-224ENST00000479051 A0A0J9YX75 114 aa15□□□□□ -0.01
VARS-224ENST00000479051 GDF5OSQ5U4N7 250 aa15□□□□□ -0.01
VARS-224ENST00000479051 IGFL4Q6B9Z1 124 aa15□□□□□ -0.01
VARS-224ENST00000479051 RNF182Q8N6D2 247 aa15□□□□□ -0.01
VARS-224ENST00000479051 CLUHP3Q96NS8 147 aa15□□□□□ -0.01
VARS-224ENST00000479051 EDA2RQ9HAV5 297 aa15□□□□□ -0.01
VARS-224ENST00000479051 TIMM9Q9Y5J7 89 aa15□□□□□ -0.01
VARS-224ENST00000479051 DUSP14O95147 198 aaKnown RBP14.99□□□□□ -0.01
VARS-224ENST00000479051 IGKV3-20P01619 116 aa14.99□□□□□ -0.01
VARS-224ENST00000479051 DEFB1P60022 68 aa14.99□□□□□ -0.01
VARS-224ENST00000479051 RHOBP62745 196 aa14.99□□□□□ -0.01
VARS-224ENST00000479051 PSG3Q16557 428 aa14.99□□□□□ -0.01
VARS-224ENST00000479051 ACOT6Q3I5F7 207 aaPredicted RBP14.99□□□□□ -0.01
VARS-224ENST00000479051 RARRES2Q99969 163 aa14.99□□□□□ -0.01
VARS-224ENST00000479051 ZNF331Q9NQX6 463 aaPredicted RBP14.99□□□□□ -0.01
VARS-224ENST00000479051 FUT9Q9Y231 359 aa14.99□□□□□ -0.01
VARS-224ENST00000479051 BORCS7-ASMTA0A0B4J1R7 106 aa14.98□□□□□ -0.01
VARS-224ENST00000479051 RNF222A6NCQ9 220 aa14.98□□□□□ -0.01
VARS-224ENST00000479051 F6UB75 175 aa14.98□□□□□ -0.01
VARS-224ENST00000479051 SNRPCP09234 159 aaKnown RBP14.98□□□□□ -0.01
VARS-224ENST00000479051 HIST1H1EP10412 219 aaKnown RBP14.98□□□□□ -0.01
VARS-224ENST00000479051 C4BPBP20851 252 aa14.98□□□□□ -0.01
VARS-224ENST00000479051 MIR17HGQ75NE6 70 aa14.98□□□□□ -0.01
VARS-224ENST00000479051 H3BQ15 152 aa14.97□□□□□ -0.01
VARS-224ENST00000479051 H3BTX0 84 aa14.97□□□□□ -0.01
VARS-224ENST00000479051 ZNF253O75346 499 aa14.97□□□□□ -0.01
VARS-224ENST00000479051 TAS2R45P59539 299 aa14.97□□□□□ -0.01
VARS-224ENST00000479051 PSG9Q00887 426 aa14.97□□□□□ -0.01
VARS-224ENST00000479051 HSD17B11Q8NBQ5 300 aa14.97□□□□□ -0.01
VARS-224ENST00000479051 OR11H2Q8NH07 326 aa14.97□□□□□ -0.01
VARS-224ENST00000479051 MUC7Q8TAX7 377 aa14.97□□□□□ -0.01
VARS-224ENST00000479051 SLC25A2Q9BXI2 301 aa14.97□□□□□ -0.01
VARS-224ENST00000479051 G3V3Q6 166 aa14.96□□□□□ -0.01
VARS-224ENST00000479051 ARPC5O15511 151 aa14.96□□□□□ -0.01
VARS-224ENST00000479051 GIG44P09565 113 aaPredicted RBP14.96□□□□□ -0.01
VARS-224ENST00000479051 M6PRP20645 277 aa14.96□□□□□ -0.01
VARS-224ENST00000479051 PDE6HQ13956 83 aa14.96□□□□□ -0.01
VARS-224ENST00000479051 IL17DQ8TAD2 202 aa14.96□□□□□ -0.01
VARS-224ENST00000479051 RPUSD4Q96CM3 377 aaKnown RBP14.96□□□□□ -0.01
VARS-224ENST00000479051 PSMG3Q9BT73 122 aaPredicted RBP14.96□□□□□ -0.01
VARS-224ENST00000479051 ZNF586Q9NXT0 402 aa14.96□□□□□ -0.01
VARS-224ENST00000479051 TRBV19A0A075B6N1 114 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 A0A1W2PPV4 95 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 C3orf84H3BNL1 204 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 SLC17A3O00476 420 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 TAAR5O14804 337 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 PYYP10082 97 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 HLA-DMBP28068 263 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 KHDC3LQ587J8 217 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 SAT2Q96F10 170 aaPredicted RBP14.95□□□□□ -0.02
VARS-224ENST00000479051 PAXXQ9BUH6 204 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 MFFQ9GZY8 342 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 OR51M1Q9H341 326 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 XCL2Q9UBD3 114 aa14.95□□□□□ -0.02
VARS-224ENST00000479051 SMLR1H3BR10 107 aa14.94□□□□□ -0.02
VARS-224ENST00000479051 OR7C2O60412 319 aa14.94□□□□□ -0.02
VARS-224ENST00000479051 CNN1P51911 297 aaKnown RBP14.94□□□□□ -0.02
VARS-224ENST00000479051 HIST1H1AQ02539 215 aaPredicted RBP14.94□□□□□ -0.02
VARS-224ENST00000479051 OR8A1Q8NGG7 326 aa14.94□□□□□ -0.02
VARS-224ENST00000479051 OR2G3Q8NGZ4 309 aa14.94□□□□□ -0.02
VARS-224ENST00000479051 BLNKQ8WV28 456 aa14.94□□□□□ -0.02
VARS-224ENST00000479051 GNPNAT1Q96EK6 184 aaPredicted RBP14.94□□□□□ -0.02
VARS-224ENST00000479051 FAM167A-AS1Q96KT0 104 aa14.94□□□□□ -0.02
VARS-224ENST00000479051 PPP1R14DQ9NXH3 145 aa14.94□□□□□ -0.02
VARS-224ENST00000479051 A0A0J9YWU9 116 aa14.93□□□□□ -0.02
VARS-224ENST00000479051 MBP02144 154 aa14.93□□□□□ -0.02
VARS-224ENST00000479051 AMBPP02760 352 aa14.93□□□□□ -0.02
VARS-224ENST00000479051 ATP6V0CP27449 155 aa14.93□□□□□ -0.02
VARS-224ENST00000479051 SERF2P84101 59 aa14.93□□□□□ -0.02
VARS-224ENST00000479051 OR10G4Q8NGN3 311 aa14.93□□□□□ -0.02
VARS-224ENST00000479051 OR10G9Q8NGN4 311 aa14.93□□□□□ -0.02
VARS-224ENST00000479051 OR10G7Q8NGN6 311 aa14.93□□□□□ -0.02
VARS-224ENST00000479051 MRPL53Q96EL3 112 aaKnown RBP14.93□□□□□ -0.02
VARS-224ENST00000479051 AAMDCQ9H7C9 122 aa14.93□□□□□ -0.02
VARS-224ENST00000479051 PRELID1Q9Y255 219 aa14.93□□□□□ -0.02
VARS-224ENST00000479051 A8MTW9 85 aa14.92□□□□□ -0.02
VARS-224ENST00000479051 JTBO76095 146 aa14.92□□□□□ -0.02
VARS-224ENST00000479051 NBEAP1P0C6P0 100 aa14.92□□□□□ -0.02
VARS-224ENST00000479051 FXYD7P58549 80 aa14.92□□□□□ -0.02
VARS-224ENST00000479051 RPL7L1Q6DKI1 246 aaKnown RBP14.92□□□□□ -0.02
VARS-224ENST00000479051 OR10J6PQ8NGY7 276 aa14.92□□□□□ -0.02
VARS-224ENST00000479051 RNF141Q8WVD5 230 aa14.92□□□□□ -0.02
VARS-224ENST00000479051 SLC35B3Q9H1N7 401 aa14.92□□□□□ -0.02
VARS-224ENST00000479051 RFNGQ9Y644 331 aa14.92□□□□□ -0.02
VARS-224ENST00000479051 ZNF705DP0CH99 300 aaPredicted RBP14.91□□□□□ -0.02
VARS-224ENST00000479051 ZNF705BP0CI00 300 aaPredicted RBP14.91□□□□□ -0.02
VARS-224ENST00000479051 RAB2AP61019 212 aa14.91□□□□□ -0.02
VARS-224ENST00000479051 UBE2L3P68036 154 aaKnown RBP14.91□□□□□ -0.02
VARS-224ENST00000479051 FAM122CQ6P4D5 195 aa14.91□□□□□ -0.02
VARS-224ENST00000479051 Q6ZNX1 250 aa14.91□□□□□ -0.02
VARS-224ENST00000479051 CSNK1G2-AS1Q8NCQ2 148 aa14.91□□□□□ -0.02
VARS-224ENST00000479051 HMSDA8MTL9 139 aa14.9□□□□□ -0.02
VARS-224ENST00000479051 ZNF705FA8MVS1 300 aaPredicted RBP14.9□□□□□ -0.02
VARS-224ENST00000479051 ZNF705EA8MWA4 302 aaPredicted RBP14.9□□□□□ -0.02
VARS-224ENST00000479051 OR10J4P0C629 311 aa14.9□□□□□ -0.02
VARS-224ENST00000479051 MIFP14174 115 aa14.9□□□□□ -0.02
VARS-224ENST00000479051 ZNF345Q14585 488 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms