RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 FAM104BQ5XKR9 115 aa16.87■□□□□ 0.29
SDF4-206ENST00000478938 HARBI1Q96MB7 349 aa16.87■□□□□ 0.29
SDF4-206ENST00000478938 ZNF493Q6ZR52 646 aa16.86■□□□□ 0.29
SDF4-206ENST00000478938 PPDPFLQ8WWR9 84 aa16.86■□□□□ 0.29
SDF4-206ENST00000478938 C12orf49Q9H741 205 aa16.86■□□□□ 0.29
SDF4-206ENST00000478938 GP9P14770 177 aa16.86■□□□□ 0.29
SDF4-206ENST00000478938 EVI2AP22794 236 aa16.86■□□□□ 0.29
SDF4-206ENST00000478938 PSMB2P49721 201 aa16.86■□□□□ 0.29
SDF4-206ENST00000478938 MEOX1P50221 254 aa16.86■□□□□ 0.29
SDF4-206ENST00000478938 EXOC3-AS1Q8N2X6 119 aa16.86■□□□□ 0.29
SDF4-206ENST00000478938 DLX4Q92988 240 aaPredicted RBP16.86■□□□□ 0.29
SDF4-206ENST00000478938 FOXC2Q99958 501 aa16.86■□□□□ 0.29
SDF4-206ENST00000478938 TMSB15BA0A087X1C1 80 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 E7EUB6 86 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 TBC1D28Q2M2D7 210 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 RUSC1-AS1Q66K80 236 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.85■□□□□ 0.29
SDF4-206ENST00000478938 CITED1Q99966 193 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 PI4KAP42356 2102 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 TMEM8BA6NDV4 472 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 GAGE12JA6NER3 117 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 GAGE7O76087 117 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 GAGE12FP0CL80 117 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 GAGE12GP0CL81 117 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 GAGE12IP0CL82 117 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 GAGE4Q13068 117 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 POU2AF1Q16633 256 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 SLC25A45Q8N413 288 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 C8orf46Q8TAG6 207 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 TMEM160Q9NX00 188 aa16.85■□□□□ 0.29
SDF4-206ENST00000478938 IGHV1OR15-9A0A0B4J2B8 117 aa16.84■□□□□ 0.29
SDF4-206ENST00000478938 SAA1P0DJI8 122 aaPredicted RBP16.84■□□□□ 0.29
SDF4-206ENST00000478938 TAL2Q16559 108 aa16.84■□□□□ 0.29
SDF4-206ENST00000478938 AJUBAQ96IF1 538 aa16.84■□□□□ 0.29
SDF4-206ENST00000478938 TNRC18O15417 2968 aaPredicted RBP16.84■□□□□ 0.29
SDF4-206ENST00000478938 SHISA9B4DS77 424 aa16.84■□□□□ 0.29
SDF4-206ENST00000478938 PRDX2P32119 198 aa16.84■□□□□ 0.29
SDF4-206ENST00000478938 LYZL1Q6UWQ5 148 aa16.84■□□□□ 0.29
SDF4-206ENST00000478938 Q6ZS92 163 aa16.84■□□□□ 0.29
SDF4-206ENST00000478938 TDHQ8IZJ6 230 aa16.84■□□□□ 0.29
SDF4-206ENST00000478938 FABP5P3A8MUU1 101 aa16.84■□□□□ 0.29
SDF4-206ENST00000478938 ID1P41134 155 aa16.84■□□□□ 0.29
SDF4-206ENST00000478938 LEPP41159 167 aa16.84■□□□□ 0.29
SDF4-206ENST00000478938 TRBV7-3A0A075B6L6 115 aa16.83■□□□□ 0.28
SDF4-206ENST00000478938 IQCF6A8MYZ5 107 aa16.83■□□□□ 0.28
SDF4-206ENST00000478938 DPM2O94777 84 aa16.83■□□□□ 0.28
SDF4-206ENST00000478938 PRTN3P24158 256 aa16.83■□□□□ 0.28
SDF4-206ENST00000478938 CKS2P33552 79 aa16.83■□□□□ 0.28
SDF4-206ENST00000478938 NDUFV3P56181 108 aaKnown RBP16.83■□□□□ 0.28
SDF4-206ENST00000478938 NXPH1P58417 271 aa16.83■□□□□ 0.28
SDF4-206ENST00000478938 MRPS17Q9Y2R5 130 aaKnown RBP16.83■□□□□ 0.28
SDF4-206ENST00000478938 TRAV40A0A0B4J280 105 aa16.83■□□□□ 0.28
SDF4-206ENST00000478938 ATP5IP56385 69 aaPredicted RBP16.83■□□□□ 0.28
SDF4-206ENST00000478938 ZFP2Q6ZN57 461 aa16.83■□□□□ 0.28
SDF4-206ENST00000478938 TMEM158Q8WZ71 300 aa16.83■□□□□ 0.28
SDF4-206ENST00000478938 CALYQ9NYX4 217 aa16.83■□□□□ 0.28
SDF4-206ENST00000478938 DNAJC13O75165 2243 aa16.82■□□□□ 0.28
SDF4-206ENST00000478938 ARL3P36405 182 aa16.82■□□□□ 0.28
SDF4-206ENST00000478938 CRIP1P50238 77 aa16.82■□□□□ 0.28
SDF4-206ENST00000478938 TEN1Q86WV5 123 aa16.82■□□□□ 0.28
SDF4-206ENST00000478938 ZNRD1Q9P1U0 126 aa16.82■□□□□ 0.28
SDF4-206ENST00000478938 LOC107984156A0A0G2JMH3 177 aa16.82■□□□□ 0.28
SDF4-206ENST00000478938 ARL17AQ8IVW1 177 aa16.82■□□□□ 0.28
SDF4-206ENST00000478938 IL4P05112 153 aa16.81■□□□□ 0.28
SDF4-206ENST00000478938 ZNF688P0C7X2 276 aa16.81■□□□□ 0.28
SDF4-206ENST00000478938 ERHP84090 104 aaKnown RBP16.81■□□□□ 0.28
SDF4-206ENST00000478938 PSMG4Q5JS54 123 aa16.81■□□□□ 0.28
SDF4-206ENST00000478938 HOXA3O43365 443 aaPredicted RBP16.81■□□□□ 0.28
SDF4-206ENST00000478938 C10orf55Q5SWW7 151 aa16.81■□□□□ 0.28
SDF4-206ENST00000478938 ZNRF1Q8ND25 227 aa16.81■□□□□ 0.28
SDF4-206ENST00000478938 IGHV3OR15-7A0A075B7D8 119 aa16.8■□□□□ 0.28
SDF4-206ENST00000478938 THAP8Q8NA92 274 aa16.8■□□□□ 0.28
SDF4-206ENST00000478938 IGKV1D-17A0A075B6S4 117 aa16.8■□□□□ 0.28
SDF4-206ENST00000478938 A0A087WX48 190 aa16.8■□□□□ 0.28
SDF4-206ENST00000478938 RHODO00212 210 aa16.8■□□□□ 0.28
SDF4-206ENST00000478938 WT1-ASQ06250 92 aa16.8■□□□□ 0.28
SDF4-206ENST00000478938 KLF14Q8TD94 323 aaPredicted RBP16.8■□□□□ 0.28
SDF4-206ENST00000478938 RAX2Q96IS3 184 aa16.8■□□□□ 0.28
SDF4-206ENST00000478938 PRO3102Q9H379 93 aa16.8■□□□□ 0.28
SDF4-206ENST00000478938 NDUFA4L2Q9NRX3 87 aa16.8■□□□□ 0.28
SDF4-206ENST00000478938 ZNF318Q5VUA4 2279 aa16.79■□□□□ 0.28
SDF4-206ENST00000478938 GAS8-AS1O95177 125 aa16.79■□□□□ 0.28
SDF4-206ENST00000478938 SRD5A1P18405 259 aa16.79■□□□□ 0.28
SDF4-206ENST00000478938 HLA-DRB4P13762 266 aa16.79■□□□□ 0.28
SDF4-206ENST00000478938 CXXC4Q9H2H0 198 aa16.79■□□□□ 0.28
SDF4-206ENST00000478938 TMEM133Q9H2Q1 129 aa16.79■□□□□ 0.28
SDF4-206ENST00000478938 OTORQ9NRC9 128 aa16.79■□□□□ 0.28
SDF4-206ENST00000478938 MRPL35Q9NZE8 188 aaKnown RBP16.79■□□□□ 0.28
SDF4-206ENST00000478938 HLA-DRB4X5D2U9 266 aa16.79■□□□□ 0.28
SDF4-206ENST00000478938 TWIST1Q15672 202 aa16.78■□□□□ 0.28
SDF4-206ENST00000478938 PRR14LQ5THK1 2151 aa16.78■□□□□ 0.28
SDF4-206ENST00000478938 MAGEA5P43359 124 aa16.78■□□□□ 0.28
SDF4-206ENST00000478938 IGHV5-10-1A0A0J9YXX1 117 aa16.77■□□□□ 0.28
SDF4-206ENST00000478938 LINC01549A6NIU2 74 aa16.77■□□□□ 0.28
SDF4-206ENST00000478938 ZCCHC24Q8N2G6 241 aaKnown RBP16.77■□□□□ 0.28
SDF4-206ENST00000478938 INTS1Q8N201 2190 aaKnown RBP16.77■□□□□ 0.27
SDF4-206ENST00000478938 A0A1W2PQM1 296 aa16.77■□□□□ 0.27
SDF4-206ENST00000478938 TNFRSF1AP19438 455 aa16.77■□□□□ 0.27
SDF4-206ENST00000478938 GAGE2BQ13066 116 aa16.77■□□□□ 0.27
SDF4-206ENST00000478938 GAGE2EQ4V326 116 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms