RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 MSRB2Q9Y3D2 182 aa8.5□□□□□ -1.05
VPS52-217ENST00000478934 TRBV19A0A075B6N1 114 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 OR2J3O76001 311 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 TSPOP30536 169 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 KLF5Q13887 457 aaPredicted RBP8.49□□□□□ -1.05
VPS52-217ENST00000478934 LY6DQ14210 128 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 FBXL19-AS1Q494R0 122 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 COL5A1-AS1Q5SY13 56 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 OR11H6Q8NGC7 330 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 RNF125Q96EQ8 232 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
VPS52-217ENST00000478934 CELSR2Q9HCU4 2923 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 F8W735 103 aaPredicted RBP8.49□□□□□ -1.05
VPS52-217ENST00000478934 OVOL3O00110 214 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 CRIP1P50238 77 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 TCTAP57738 103 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 FXYD7P58549 80 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 C5orf64Q2M2E5 130 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 C11orf71Q6IPW1 123 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 RASL11AQ6T310 242 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 VMO1Q7Z5L0 202 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 C8orf49Q96NF6 230 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 SHANK2-AS3Q9BTD1 123 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 OTORQ9NRC9 128 aa8.49□□□□□ -1.05
VPS52-217ENST00000478934 TCF21O43680 179 aa8.48□□□□□ -1.05
VPS52-217ENST00000478934 SIGLEC15Q6ZMC9 328 aa8.48□□□□□ -1.05
VPS52-217ENST00000478934 RBPMS2Q6ZRY4 209 aaKnown RBP8.48□□□□□ -1.05
VPS52-217ENST00000478934 CHRDL1Q9BU40 450 aa8.48□□□□□ -1.05
VPS52-217ENST00000478934 UTP20O75691 2785 aaKnown RBP8.48□□□□□ -1.05
VPS52-217ENST00000478934 OR2T8A6NH00 312 aa8.48□□□□□ -1.05
VPS52-217ENST00000478934 OR4C46A6NHA9 309 aa8.48□□□□□ -1.05
VPS52-217ENST00000478934 ODF3BA8MYP8 253 aa8.48□□□□□ -1.05
VPS52-217ENST00000478934 H3BRN7 92 aa8.48□□□□□ -1.05
VPS52-217ENST00000478934 GNG7O60262 68 aa8.48□□□□□ -1.05
VPS52-217ENST00000478934 HLA-DRB1P01911 266 aa8.48□□□□□ -1.05
VPS52-217ENST00000478934 TIMD4Q96H15 378 aa8.48□□□□□ -1.05
VPS52-217ENST00000478934 TRAV9-2A0A087WT02 112 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 MRPS12O15235 138 aaKnown RBP8.47□□□□□ -1.05
VPS52-217ENST00000478934 PRTN3P24158 256 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 KLRB1Q12918 225 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 ATP5L2Q7Z4Y8 100 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 ZNF414Q96IQ9 312 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 TMEM70Q9BUB7 260 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 TMUB1Q9BVT8 246 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 TMEM14CQ9P0S9 112 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 LOC102724200A0A096LPH7 203 aaPredicted RBP8.47□□□□□ -1.05
VPS52-217ENST00000478934 NDUFA3O95167 84 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 LEPROTL1O95214 131 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 LINC00614P0C842 121 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 FAM106CPP0CH98 169 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 HLA-DMBP28068 263 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 PAX2Q02962 417 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 FAM106AQ4KMX7 169 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 CRYBG3Q68DQ2 2970 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 BPIFA4PQ86YQ2 179 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 NPBQ8NG41 125 aa8.47□□□□□ -1.05
VPS52-217ENST00000478934 SNAI2O43623 268 aa8.46□□□□□ -1.05
VPS52-217ENST00000478934 FOSL1P15407 271 aa8.46□□□□□ -1.05
VPS52-217ENST00000478934 OR4F17Q8NGA8 305 aa8.46□□□□□ -1.05
VPS52-217ENST00000478934 ARPC1AQ92747 370 aa8.46□□□□□ -1.05
VPS52-217ENST00000478934 RNF5Q99942 180 aa8.46□□□□□ -1.05
VPS52-217ENST00000478934 CFAP46Q8IYW2 2715 aa8.46□□□□□ -1.05
VPS52-217ENST00000478934 SPG11Q96JI7 2443 aa8.46□□□□□ -1.06
VPS52-217ENST00000478934 CSMD2Q7Z408 3487 aa8.46□□□□□ -1.06
VPS52-217ENST00000478934 IGLV11-55A0A075B6I3 123 aa8.46□□□□□ -1.06
VPS52-217ENST00000478934 LOC389332A0A1B0GUA5 103 aa8.46□□□□□ -1.06
VPS52-217ENST00000478934 APOHP02749 345 aaPredicted RBP8.46□□□□□ -1.06
VPS52-217ENST00000478934 FOXE3Q13461 319 aa8.46□□□□□ -1.06
VPS52-217ENST00000478934 KLHDC1Q8N7A1 406 aa8.46□□□□□ -1.06
VPS52-217ENST00000478934 ZNF492Q9P255 531 aa8.46□□□□□ -1.06
VPS52-217ENST00000478934 PSG8Q9UQ74 426 aa8.46□□□□□ -1.06
VPS52-217ENST00000478934 IGKV2-40A0A087WW87 121 aaPredicted RBP8.45□□□□□ -1.06
VPS52-217ENST00000478934 WI2-2373I1.2A0A1W2PRP0 233 aa8.45□□□□□ -1.06
VPS52-217ENST00000478934 LINC01548A6NM66 108 aa8.45□□□□□ -1.06
VPS52-217ENST00000478934 SYS1-DBNDD2H3BUS1 97 aa8.45□□□□□ -1.06
VPS52-217ENST00000478934 IGKV2D-40P01614 121 aaPredicted RBP8.45□□□□□ -1.06
VPS52-217ENST00000478934 EGR2P11161 476 aaPredicted RBP8.45□□□□□ -1.06
VPS52-217ENST00000478934 HOXB4P17483 251 aaPredicted RBP8.45□□□□□ -1.06
VPS52-217ENST00000478934 IGHV3OR16-13A0A075B7E8 117 aa8.45□□□□□ -1.06
VPS52-217ENST00000478934 IGHV3-74A0A0B4J1X5 117 aa8.45□□□□□ -1.06
VPS52-217ENST00000478934 SERTM2A0A1B0GWG4 89 aa8.45□□□□□ -1.06
VPS52-217ENST00000478934 NPIPB6E9PJ23 425 aa8.45□□□□□ -1.06
VPS52-217ENST00000478934 Q8TAT8 98 aa8.45□□□□□ -1.06
VPS52-217ENST00000478934 C1RLQ9NZP8 487 aa8.45□□□□□ -1.06
VPS52-217ENST00000478934 ZFP30Q9Y2G7 519 aa8.45□□□□□ -1.06
VPS52-217ENST00000478934 FLNCQ14315 2725 aa8.44□□□□□ -1.06
VPS52-217ENST00000478934 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.44□□□□□ -1.06
VPS52-217ENST00000478934 IGHV3-66A0A0C4DH42 116 aa8.44□□□□□ -1.06
VPS52-217ENST00000478934 TMEM213A2RRL7 107 aa8.44□□□□□ -1.06
VPS52-217ENST00000478934 CEACAM3P40198 252 aa8.44□□□□□ -1.06
VPS52-217ENST00000478934 LOXL1Q08397 574 aaPredicted RBP8.44□□□□□ -1.06
VPS52-217ENST00000478934 ZNF562Q6V9R5 426 aa8.44□□□□□ -1.06
VPS52-217ENST00000478934 UBTD1Q9HAC8 227 aa8.44□□□□□ -1.06
VPS52-217ENST00000478934 M0R1W7 72 aa8.44□□□□□ -1.06
VPS52-217ENST00000478934 PSG3Q16557 428 aa8.44□□□□□ -1.06
VPS52-217ENST00000478934 MPV17L2Q567V2 206 aa8.44□□□□□ -1.06
VPS52-217ENST00000478934 SMIM12Q96EX1 92 aa8.44□□□□□ -1.06
VPS52-217ENST00000478934 C21orf62Q9NYP8 219 aa8.44□□□□□ -1.06
VPS52-217ENST00000478934 IGHV3OR16-10A0A075B7F0 116 aa8.43□□□□□ -1.06
VPS52-217ENST00000478934 IGHV7-81A0A0B4J1V7 117 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms