RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 F5H697 171 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 LY6LH3BQJ8 138 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 NUPR1O60356 82 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 PLAUP00749 431 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 APCSP02743 223 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 REG1AP05451 166 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 LIPFP07098 398 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 ROS1P08922 2347 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 NBEAP1P0C6P0 100 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 COX6B1P14854 86 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 ORM2P19652 201 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 COX7A1P24310 79 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 COL8A2P25067 703 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 MFAP2P55001 183 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 TCL1AP56279 114 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 CD300EQ496F6 205 aaPredicted RBP3.91□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF672Q499Z4 452 aaPredicted RBP3.91□□□□□ -1.78
SF3B6-202ENST00000478050 TPTE2P1Q5T6R2 138 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 HCP5Q6MZN7 132 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 MRPL54Q6P161 138 aaKnown RBP3.91□□□□□ -1.78
SF3B6-202ENST00000478050 C16orf54Q6UWD8 224 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 ATP5L2Q7Z4Y8 100 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 MRPL52Q86TS9 123 aaKnown RBP3.91□□□□□ -1.78
SF3B6-202ENST00000478050 SIGLECL1Q8N7X8 197 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 C11orf44Q8N8P7 122 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 C5orf17Q8NAS9 161 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 LY6G5BQ8NDX9 201 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 OR1B1Q8NGR6 318 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 SRSF12Q8WXF0 261 aaKnown RBP3.91□□□□□ -1.78
SF3B6-202ENST00000478050 TIMD4Q96H15 378 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 FMC1Q96HJ9 113 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 RITA1Q96K30 269 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 KCNS1Q96KK3 526 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 TBX15Q96SF7 602 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 ATG101Q9BSB4 218 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 SAMD10Q9BYL1 202 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 RAB1BQ9H0U4 201 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 GNB4Q9HAV0 340 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 OTORQ9NRC9 128 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF586Q9NXT0 402 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 MRPL27Q9P0M9 148 aaKnown RBP3.91□□□□□ -1.78
SF3B6-202ENST00000478050 TMEM14CQ9P0S9 112 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF492Q9P255 531 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 RNF24Q9Y225 148 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 HIGD1AQ9Y241 93 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 KLF12Q9Y4X4 402 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 SOX21Q9Y651 276 aaPredicted RBP3.91□□□□□ -1.78
SF3B6-202ENST00000478050 DCHS2Q6V1P9 2916 aa3.91□□□□□ -1.78
SF3B6-202ENST00000478050 CSMD2Q7Z408 3487 aa3.9□□□□□ -1.78
SF3B6-202ENST00000478050 TRBV6-1A0A0K0K1D8 114 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 PGPA6NDG6 321 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 A8MWL6 223 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 I3L2K1 104 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 M0R1W7 72 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 BMPR1BO00238 502 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 SPINK4O60575 86 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 ZNF253O75346 499 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 OR2J3O76001 311 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 TOMM40O96008 361 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 IGHV3-48P01763 117 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 GPX1P07203 203 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 IGLC1P0CG04 106 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 GP9P14770 177 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 CNTFRP26992 372 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 HTR1DP28221 377 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 SRIP30626 198 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 CEACAM3P40198 252 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 SSTP61278 116 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 PLGLAQ15195 96 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 FAM162BQ5T6X4 162 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 TOMM20LQ6UXN7 152 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 TEX43Q6ZNM6 134 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 C19orf35Q6ZS72 473 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 Q6ZWC4 215 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 S100A7AQ86SG5 101 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 NHLRC2Q8NBF2 726 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 NUP35Q8NFH5 326 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 OR11H6Q8NGC7 330 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 OR4B1Q8NGF8 309 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 LINC01560Q8TB33 94 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 TSKUQ8WUA8 353 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 BLNKQ8WV28 456 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 RNF125Q96EQ8 232 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 TMEM68Q96MH6 324 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 GPR82Q96P67 336 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 RASL11BQ9BPW5 248 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 C20orf144Q9BQM9 153 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 HSPB9Q9BQS6 159 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 Q9H3A6 140 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 FBXL15Q9H469 300 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 DPM3Q9P2X0 92 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 ONECUT1Q9UBC0 465 aa3.9□□□□□ -1.79
SF3B6-202ENST00000478050 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.9□□□□□ -1.79
SF3B6-202ENST00000478050 TRAV30A0A087WSZ9 112 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 TRAV34A0A0B4J273 112 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 A0A1B0GXF2 115 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 FAM231BA6NCW3 169 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 OOSP1A8MZH6 123 aa3.89□□□□□ -1.79
SF3B6-202ENST00000478050 F2Z2F3 143 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms