RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 CD200R1LQ6Q8B3 271 aa-1.2□□□□□ -2.6
NCKAP1-204ENST00000477988 MSANTD3Q96H12 275 aa-1.2□□□□□ -2.6
NCKAP1-204ENST00000477988 SLC25A21Q9BQT8 299 aaPredicted RBP-1.2□□□□□ -2.6
NCKAP1-204ENST00000477988 CYP4F30PQ9H0H9 118 aa-1.2□□□□□ -2.6
NCKAP1-204ENST00000477988 TMEM14BQ9NUH8 114 aa-1.2□□□□□ -2.6
NCKAP1-204ENST00000477988 BCL9LQ86UU0 1499 aa-1.2□□□□□ -2.6
NCKAP1-204ENST00000477988 CDK12Q9NYV4 1490 aaPredicted RBP-1.2□□□□□ -2.6
NCKAP1-204ENST00000477988 RAD50Q92878 1312 aa-1.2□□□□□ -2.6
NCKAP1-204ENST00000477988 ANK1P16157 1881 aa-1.2□□□□□ -2.6
NCKAP1-204ENST00000477988 MYO5AQ9Y4I1 1855 aaKnown RBP-1.2□□□□□ -2.6
NCKAP1-204ENST00000477988 AKAP9Q99996 3911 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 ABCC11Q96J66 1382 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 DLEC1Q9Y238 1755 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 BLMP54132 1417 aaPredicted RBP-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 KIF1BO60333 1816 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 VIRMAQ69YN4 1812 aaKnown RBP-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 C1orf196B1AJZ1 125 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 M0R233 179 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 PIAS1O75925 651 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 ISG15P05161 165 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 OR5G3P0C626 314 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 RPL5P46777 297 aaKnown RBP-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 KLKP1Q107X0 134 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 PMAIP1Q13794 54 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 Q5XG85 94 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 FOXI2Q6ZQN5 318 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 COPS6Q7L5N1 327 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 PDZD9Q8IXQ8 264 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 SYCE1Q8N0S2 351 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 C12orf45Q8N5I9 185 aaPredicted RBP-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 OR51I1Q9H343 314 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 MAP1LC3AQ9H492 121 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 SPANXB1Q9NS25 103 aaPredicted RBP-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 C15orf41Q9Y2V0 281 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 USP54Q70EL1 1684 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 TRPM7Q96QT4 1865 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 UBR2Q8IWV8 1755 aa-1.21□□□□□ -2.6
NCKAP1-204ENST00000477988 TNRC18O15417 2968 aaPredicted RBP-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 NUP210LQ5VU65 1888 aa-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 EEF1E1-BLOC1S5C9J1V9 151 aa-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 PSMD12O00232 456 aaPredicted RBP-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 NDUFB3O43676 98 aa-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 SERPINE1P05121 402 aa-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 C8orf88P0DMB2 117 aa-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 HIST1H1TP22492 207 aaPredicted RBP-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 SDHAF4Q5VUM1 108 aa-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 C22orf39Q6P5X5 142 aa-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 TMEM86BQ8N661 226 aa-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 UPF3BQ9BZI7 483 aaKnown RBP-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 DNHD1Q96M86 4753 aa-1.22□□□□□ -2.6
NCKAP1-204ENST00000477988 DSPPQ9NZW4 1301 aa-1.22□□□□□ -2.61
NCKAP1-204ENST00000477988 NIPBLQ6KC79 2804 aaeCLIP-1.22□□□□□ -2.61
NCKAP1-204ENST00000477988 LAMC1P11047 1609 aa-1.22□□□□□ -2.61
NCKAP1-204ENST00000477988 NCAPD3P42695 1498 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 PCNX1Q96RV3 2341 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 TRGV10A0A0A0MS01 117 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 MCRIP1C9JLW8 97 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 F8VZ95 297 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 M0R3E3 92 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 NDUFS8O00217 210 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 CXCR6O00574 342 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 IVLP07476 585 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 RBP1P09455 135 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 CCDC172P0C7W6 258 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 SRIP30626 198 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 MIR22HGQ0VDD5 57 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 EDDM3AQ14507 147 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 C5orf17Q8NAS9 161 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 SLC35B4Q969S0 331 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 HYLS1Q96M11 299 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 MRPL35Q9NZE8 188 aaKnown RBP-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 ARL5AQ9Y689 179 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 PIK3C2AO00443 1686 aa-1.23□□□□□ -2.61
NCKAP1-204ENST00000477988 CEP164Q9UPV0 1460 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 DNAH2Q9P225 4427 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 TRAV26-2A0A0B4J265 109 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 LOC101927531A0A1B0GV80 90 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 TGOLN2O43493 480 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 APOA1P02647 267 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 SPRR1AP35321 89 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 RHOBP62745 196 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 RANP62826 216 aaKnown RBP-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 CLVS2Q5SYC1 327 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 C20orf196Q8IYI0 205 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 OR51D1Q8NGF3 324 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 OR5D16Q8NGK9 328 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 C19orf60Q96EN9 201 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 BPESC1Q9GZL8 116 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 OR52A5Q9H2C5 316 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 FBXO5Q9UKT4 447 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 CPDO75976 1380 aa-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 N4BP2Q86UW6 1770 aaPredicted RBP-1.24□□□□□ -2.61
NCKAP1-204ENST00000477988 A0A087WTM6 91 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 GVQW2A0A096LPI5 108 aaPredicted RBP-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 hDV103S1A0JD37 113 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 SLC16A4O15374 487 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 OR10J4P0C629 311 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 PET100P0DJ07 73 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 RAB5CP51148 216 aa-1.25□□□□□ -2.61
NCKAP1-204ENST00000477988 CARD18P57730 90 aa-1.25□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms