RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 PLP1P60201 277 aa8.21□□□□□ -1.1
CPSF7-211ENST00000477890 RRAS2P62070 204 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-211ENST00000477890 ID3Q02535 119 aa8.21□□□□□ -1.1
CPSF7-211ENST00000477890 MAPKAPK5-AS1Q8N8E1 139 aa8.21□□□□□ -1.1
CPSF7-211ENST00000477890 ARL6Q9H0F7 186 aa8.21□□□□□ -1.1
CPSF7-211ENST00000477890 NOP10Q9NPE3 64 aaKnown RBP8.21□□□□□ -1.1
CPSF7-211ENST00000477890 TIMM8BQ9Y5J9 83 aaPredicted RBP8.21□□□□□ -1.1
CPSF7-211ENST00000477890 PMS2P5A8MQ11 134 aa8.2□□□□□ -1.1
CPSF7-211ENST00000477890 SSSCA1O60232 199 aa8.2□□□□□ -1.1
CPSF7-211ENST00000477890 CCNKO75909 580 aa8.2□□□□□ -1.1
CPSF7-211ENST00000477890 ANXA7P20073 488 aaKnown RBP8.2□□□□□ -1.1
CPSF7-211ENST00000477890 SELENOTP62341 195 aa8.2□□□□□ -1.1
CPSF7-211ENST00000477890 SSX7Q7RTT5 188 aa8.2□□□□□ -1.1
CPSF7-211ENST00000477890 S100A7AQ86SG5 101 aa8.2□□□□□ -1.1
CPSF7-211ENST00000477890 RPUSD4Q96CM3 377 aaKnown RBP8.2□□□□□ -1.1
CPSF7-211ENST00000477890 FAM210AQ96ND0 272 aa8.2□□□□□ -1.1
CPSF7-211ENST00000477890 V9GYH0 126 aa8.2□□□□□ -1.1
CPSF7-211ENST00000477890 C9orf170A2RU37 121 aa8.19□□□□□ -1.1
CPSF7-211ENST00000477890 UBE2MP61081 183 aaKnown RBP8.19□□□□□ -1.1
CPSF7-211ENST00000477890 DLK1P80370 383 aa8.19□□□□□ -1.1
CPSF7-211ENST00000477890 OR5I1Q13606 314 aa8.19□□□□□ -1.1
CPSF7-211ENST00000477890 PATE2Q6UY27 113 aa8.19□□□□□ -1.1
CPSF7-211ENST00000477890 ZNF493Q6ZR52 646 aa8.19□□□□□ -1.1
CPSF7-211ENST00000477890 RNASE8Q8TDE3 154 aaKnown RBP8.19□□□□□ -1.1
CPSF7-211ENST00000477890 TMEM263Q8WUH6 116 aaKnown RBP8.19□□□□□ -1.1
CPSF7-211ENST00000477890 DEDD2Q8WXF8 326 aa8.19□□□□□ -1.1
CPSF7-211ENST00000477890 ARV1Q9H2C2 271 aa8.19□□□□□ -1.1
CPSF7-211ENST00000477890 Q9H8V8 135 aa8.19□□□□□ -1.1
CPSF7-211ENST00000477890 NPVFQ9HCQ7 196 aa8.19□□□□□ -1.1
CPSF7-211ENST00000477890 H7BYZ3 331 aa8.18□□□□□ -1.1
CPSF7-211ENST00000477890 MRPS12O15235 138 aaKnown RBP8.18□□□□□ -1.1
CPSF7-211ENST00000477890 SNRPCP09234 159 aaKnown RBP8.18□□□□□ -1.1
CPSF7-211ENST00000477890 METTL15P1P0C7V9 234 aa8.18□□□□□ -1.1
CPSF7-211ENST00000477890 SLC38A11Q08AI6 406 aa8.18□□□□□ -1.1
CPSF7-211ENST00000477890 KIR3DS1Q14943 382 aa8.18□□□□□ -1.1
CPSF7-211ENST00000477890 LCN15Q6UWW0 184 aa8.18□□□□□ -1.1
CPSF7-211ENST00000477890 SPATA12Q7Z6I5 190 aa8.18□□□□□ -1.1
CPSF7-211ENST00000477890 OR10J6PQ8NGY7 276 aa8.18□□□□□ -1.1
CPSF7-211ENST00000477890 GNPNAT1Q96EK6 184 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-211ENST00000477890 SMIM8Q96KF7 97 aa8.18□□□□□ -1.1
CPSF7-211ENST00000477890 PARD6GQ9BYG4 376 aaPredicted RBP8.18□□□□□ -1.1
CPSF7-211ENST00000477890 MGAT4CQ9UBM8 478 aa8.18□□□□□ -1.1
CPSF7-211ENST00000477890 RNF24Q9Y225 148 aa8.18□□□□□ -1.1
CPSF7-211ENST00000477890 HSPG2P98160 4391 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 TRAV26-1A0A087WT03 109 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 A0A0J9YY99 117 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 SCGB1D2O95969 90 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 CXCL2P19875 107 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 S100A5P33763 92 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 TEPPQ6URK8 271 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 TMEM14EPQ6UXP3 125 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 LINC00305Q7Z4B0 112 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 CCDC28AQ8IWP9 274 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 OR10P1Q8NGE3 313 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 C20orf144Q9BQM9 153 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 SLC50A1Q9BRV3 221 aa8.17□□□□□ -1.1
CPSF7-211ENST00000477890 ZNF331Q9NQX6 463 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-211ENST00000477890 GAGE12BA1L429 117 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 FNDC10F2Z333 226 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 H3BTX0 84 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 K7EPK0 472 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 ZNF701M0R085 212 aaPredicted RBP8.16□□□□□ -1.1
CPSF7-211ENST00000477890 GOSR2O14653 212 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 GAGE7O76087 117 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 GAGE12FP0CL80 117 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 GAGE12GP0CL81 117 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 GAGE12IP0CL82 117 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 M6PRP20645 277 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 TTC32Q5I0X7 151 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 PXDC1Q5TGL8 231 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 GFI1BQ5VTD9 330 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 CCDC190Q86UF4 302 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 RXFP4Q8TDU9 374 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 KRTAP1-5Q9BYS1 174 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 FLVCR2Q9UPI3 526 aa8.16□□□□□ -1.1
CPSF7-211ENST00000477890 PRAC2D3DTV9 90 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 J3KRW8 73 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 SLC17A3O00476 420 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 AGPAT2O15120 278 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 NDUFB6O95139 128 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 RLN2P04090 185 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 OR4E1P0C645 316 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 HOXA5P20719 270 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 INPP1P49441 399 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 ZNF546Q86UE3 836 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 BPIFA4PQ86YQ2 179 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 Q8N1X5 172 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 LINC00612Q8N6U2 182 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 ZNF503Q96F45 646 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 Q9H3A6 140 aa8.15□□□□□ -1.1
CPSF7-211ENST00000477890 NAP1L6A6NFF2 107 aa8.14□□□□□ -1.11
CPSF7-211ENST00000477890 CCDC160A6NGH7 325 aa8.14□□□□□ -1.11
CPSF7-211ENST00000477890 SNURFLB1AK76 121 aa8.14□□□□□ -1.11
CPSF7-211ENST00000477890 COX7A2P2O60397 106 aa8.14□□□□□ -1.11
CPSF7-211ENST00000477890 TSC22D2O75157 780 aa8.14□□□□□ -1.11
CPSF7-211ENST00000477890 ARL16Q0P5N6 197 aa8.14□□□□□ -1.11
CPSF7-211ENST00000477890 ESRGQ1W209 222 aa8.14□□□□□ -1.11
CPSF7-211ENST00000477890 IAH1Q2TAA2 248 aaPredicted RBP8.14□□□□□ -1.11
CPSF7-211ENST00000477890 C4orf46Q504U0 113 aa8.14□□□□□ -1.11
CPSF7-211ENST00000477890 MORN5Q5VZ52 161 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms