RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SLC25A39Q9BZJ4 359 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-209ENST00000477554 ACTR3CQ9C0K3 210 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-209ENST00000477554 PLA2G2EQ9NZK7 142 aa13.02□□□□□ -0.33
PTPN7-209ENST00000477554 BMI1P35226 326 aa13.01□□□□□ -0.33
PTPN7-209ENST00000477554 CDC34P49427 236 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-209ENST00000477554 FAM74A1Q5RGS3 127 aa13.01□□□□□ -0.33
PTPN7-209ENST00000477554 CASC10Q5T4H9 136 aa13.01□□□□□ -0.33
PTPN7-209ENST00000477554 FAM122CQ6P4D5 195 aa13.01□□□□□ -0.33
PTPN7-209ENST00000477554 ZNF767PQ75MW2 155 aa13.01□□□□□ -0.33
PTPN7-209ENST00000477554 GLMPQ8WWB7 406 aa13.01□□□□□ -0.33
PTPN7-209ENST00000477554 SEPSECSQ9HD40 501 aaKnown RBP13.01□□□□□ -0.33
PTPN7-209ENST00000477554 FUT9Q9Y231 359 aa13.01□□□□□ -0.33
PTPN7-209ENST00000477554 RYR2Q92736 4967 aa13.01□□□□□ -0.33
PTPN7-209ENST00000477554 A0A1W2PS18 150 aa13□□□□□ -0.33
PTPN7-209ENST00000477554 H3BRN7 92 aa13□□□□□ -0.33
PTPN7-209ENST00000477554 TAS2R45P59539 299 aa13□□□□□ -0.33
PTPN7-209ENST00000477554 IFITM2Q01629 132 aa13□□□□□ -0.33
PTPN7-209ENST00000477554 DEFB135Q30KP9 77 aa13□□□□□ -0.33
PTPN7-209ENST00000477554 STXBP6Q8NFX7 210 aa13□□□□□ -0.33
PTPN7-209ENST00000477554 FAM213BQ8TBF2 198 aa13□□□□□ -0.33
PTPN7-209ENST00000477554 UHRF2Q96PU4 802 aa13□□□□□ -0.33
PTPN7-209ENST00000477554 SHANK2-AS3Q9BTD1 123 aa13□□□□□ -0.33
PTPN7-209ENST00000477554 PLECQ15149 4684 aaKnown RBP13□□□□□ -0.33
PTPN7-209ENST00000477554 CTXND1A0A1B0GTU2 59 aa12.99□□□□□ -0.33
PTPN7-209ENST00000477554 DEFB131AP59861 70 aa12.99□□□□□ -0.33
PTPN7-209ENST00000477554 C16orf54Q6UWD8 224 aa12.99□□□□□ -0.33
PTPN7-209ENST00000477554 TMEM231Q9H6L2 316 aa12.99□□□□□ -0.33
PTPN7-209ENST00000477554 ZNF98A6NK75 572 aa12.98□□□□□ -0.33
PTPN7-209ENST00000477554 ZNF705EA8MWA4 302 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-209ENST00000477554 K7EQG2 157 aa12.98□□□□□ -0.33
PTPN7-209ENST00000477554 BLOC1S1P78537 153 aa12.98□□□□□ -0.33
PTPN7-209ENST00000477554 C1orf194Q5T5A4 169 aa12.98□□□□□ -0.33
PTPN7-209ENST00000477554 DCANP1Q8TF63 244 aa12.98□□□□□ -0.33
PTPN7-209ENST00000477554 RAB24Q969Q5 203 aa12.98□□□□□ -0.33
PTPN7-209ENST00000477554 SAT2Q96F10 170 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-209ENST00000477554 GRAMD2BQ96HH9 432 aa12.98□□□□□ -0.33
PTPN7-209ENST00000477554 SLC25A22Q9H936 323 aa12.98□□□□□ -0.33
PTPN7-209ENST00000477554 TENM2Q9NT68 2774 aa12.98□□□□□ -0.33
PTPN7-209ENST00000477554 HYDINQ4G0P3 5121 aa12.98□□□□□ -0.33
PTPN7-209ENST00000477554 DNASE2O00115 360 aaPredicted RBP12.97□□□□□ -0.33
PTPN7-209ENST00000477554 BUB3O43684 328 aa12.97□□□□□ -0.33
PTPN7-209ENST00000477554 ZNF688P0C7X2 276 aa12.97□□□□□ -0.33
PTPN7-209ENST00000477554 FHITP49789 147 aa12.97□□□□□ -0.33
PTPN7-209ENST00000477554 KHDC3LQ587J8 217 aa12.97□□□□□ -0.33
PTPN7-209ENST00000477554 MIR17HGQ75NE6 70 aa12.97□□□□□ -0.33
PTPN7-209ENST00000477554 GPR82Q96P67 336 aa12.97□□□□□ -0.33
PTPN7-209ENST00000477554 KNCNA6PVL3 124 aa12.96□□□□□ -0.33
PTPN7-209ENST00000477554 TEX46H3BTG2 121 aa12.96□□□□□ -0.33
PTPN7-209ENST00000477554 H2AFB1P0C5Y9 115 aa12.96□□□□□ -0.33
PTPN7-209ENST00000477554 DEFB1P60022 68 aa12.96□□□□□ -0.33
PTPN7-209ENST00000477554 SPATA31B1PQ5VZV4 182 aa12.96□□□□□ -0.33
PTPN7-209ENST00000477554 PQLC2Q6ZP29 291 aa12.96□□□□□ -0.33
PTPN7-209ENST00000477554 SCRT1Q9BWW7 348 aa12.96□□□□□ -0.33
PTPN7-209ENST00000477554 C3orf84H3BNL1 204 aa12.96□□□□□ -0.34
PTPN7-209ENST00000477554 STAG3L2P0CL84 134 aa12.96□□□□□ -0.34
PTPN7-209ENST00000477554 STAG3L3P0CL85 134 aa12.96□□□□□ -0.34
PTPN7-209ENST00000477554 RAB14P61106 215 aa12.96□□□□□ -0.34
PTPN7-209ENST00000477554 ZNF726P1Q15940 193 aa12.96□□□□□ -0.34
PTPN7-209ENST00000477554 MORN5Q5VZ52 161 aa12.96□□□□□ -0.34
PTPN7-209ENST00000477554 BPIFA4PQ86YQ2 179 aa12.96□□□□□ -0.34
PTPN7-209ENST00000477554 OR8I2Q8N0Y5 310 aa12.96□□□□□ -0.34
PTPN7-209ENST00000477554 MBD3L1Q8WWY6 194 aa12.96□□□□□ -0.34
PTPN7-209ENST00000477554 MAP1LC3B2A6NCE7 125 aa12.95□□□□□ -0.34
PTPN7-209ENST00000477554 RGS13O14921 159 aa12.95□□□□□ -0.34
PTPN7-209ENST00000477554 CXorf1O96002 111 aa12.95□□□□□ -0.34
PTPN7-209ENST00000477554 HBE1P02100 147 aa12.95□□□□□ -0.34
PTPN7-209ENST00000477554 RPL7P18124 248 aaKnown RBP12.95□□□□□ -0.34
PTPN7-209ENST00000477554 PAFAH1B2P68402 229 aa12.95□□□□□ -0.34
PTPN7-209ENST00000477554 SFT2D1Q8WV19 159 aa12.95□□□□□ -0.34
PTPN7-209ENST00000477554 SLC25A2Q9BXI2 301 aa12.95□□□□□ -0.34
PTPN7-209ENST00000477554 MAP1LC3BQ9GZQ8 125 aa12.95□□□□□ -0.34
PTPN7-209ENST00000477554 TRAV5A0A0B4J249 113 aa12.94□□□□□ -0.34
PTPN7-209ENST00000477554 HMGB3O15347 200 aaKnown RBP12.94□□□□□ -0.34
PTPN7-209ENST00000477554 OR7C2O60412 319 aa12.94□□□□□ -0.34
PTPN7-209ENST00000477554 CD5P06127 495 aa12.94□□□□□ -0.34
PTPN7-209ENST00000477554 LCN15Q6UWW0 184 aa12.94□□□□□ -0.34
PTPN7-209ENST00000477554 SSX7Q7RTT5 188 aa12.94□□□□□ -0.34
PTPN7-209ENST00000477554 FAM167A-AS1Q96KT0 104 aa12.94□□□□□ -0.34
PTPN7-209ENST00000477554 C17orf77Q96MU5 243 aa12.94□□□□□ -0.34
PTPN7-209ENST00000477554 OR51M1Q9H341 326 aa12.94□□□□□ -0.34
PTPN7-209ENST00000477554 TMEM14CQ9P0S9 112 aa12.94□□□□□ -0.34
PTPN7-209ENST00000477554 TRAV1-1A0A0B4J248 108 aa12.93□□□□□ -0.34
PTPN7-209ENST00000477554 GIG44P09565 113 aaPredicted RBP12.93□□□□□ -0.34
PTPN7-209ENST00000477554 GALR1P47211 349 aa12.93□□□□□ -0.34
PTPN7-209ENST00000477554 PAXXQ9BUH6 204 aa12.93□□□□□ -0.34
PTPN7-209ENST00000477554 DNAH1Q9P2D7 4330 aa12.93□□□□□ -0.34
PTPN7-209ENST00000477554 TRAV2A0A0B4J234 112 aa12.92□□□□□ -0.34
PTPN7-209ENST00000477554 A0A0J9YWU9 116 aa12.92□□□□□ -0.34
PTPN7-209ENST00000477554 HELTA6NFD8 242 aa12.92□□□□□ -0.34
PTPN7-209ENST00000477554 SPRY2O43597 315 aa12.92□□□□□ -0.34
PTPN7-209ENST00000477554 ARL14EPLP0DKL9 152 aa12.92□□□□□ -0.34
PTPN7-209ENST00000477554 APOC4P55056 127 aa12.92□□□□□ -0.34
PTPN7-209ENST00000477554 SIGLEC15Q6ZMC9 328 aa12.92□□□□□ -0.34
PTPN7-209ENST00000477554 RNF183Q96D59 192 aa12.92□□□□□ -0.34
PTPN7-209ENST00000477554 EIF3GO75821 320 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPN7-209ENST00000477554 FGF8P55075 233 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-209ENST00000477554 PSMG4Q5JS54 123 aa12.91□□□□□ -0.34
PTPN7-209ENST00000477554 Q6ZWC4 215 aa12.91□□□□□ -0.34
PTPN7-209ENST00000477554 CSTL1Q9H114 145 aa12.91□□□□□ -0.34
PTPN7-209ENST00000477554 TMEM167BQ9NRX6 74 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms