RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 EEF1AKMT3Q96AZ1 226 aa12.97□□□□□ -0.33
EPHB4-204ENST00000477446 TRBV20OR9-2A0A075B6H5 130 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 TRAV9-1A0A075B6T8 112 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 TRAV5A0A0B4J249 113 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 TYMSP04818 313 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 S100A8P05109 93 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 OR10J4P0C629 311 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 CRYBB3P26998 211 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 FAM3BP58499 235 aaPredicted RBP12.96□□□□□ -0.33
EPHB4-204ENST00000477446 ZNF502Q8TBZ5 544 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 RAX2Q96IS3 184 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 CCDC140Q96MF4 163 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 DUX3Q96PT4 197 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 HIGD1AQ9Y241 93 aa12.96□□□□□ -0.33
EPHB4-204ENST00000477446 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.95□□□□□ -0.34
EPHB4-204ENST00000477446 TRBV7-1A0A0A6YYK4 115 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 M0QZ24 198 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 TRBV12-3P01733 135 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 TRGC2P03986 189 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 GNG4P50150 75 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 AKR1D1P51857 326 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 TIGITQ495A1 244 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 LINC00518Q8N0U6 118 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 OR11H1Q8NG94 326 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 OR4F17Q8NGA8 305 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 FXYD5Q96DB9 178 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 RNF24Q9Y225 148 aa12.95□□□□□ -0.34
EPHB4-204ENST00000477446 GGTLC3B5MD39 225 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 SCGB2A1O75556 95 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 RD3LP0DJH9 198 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 FABP9Q0Z7S8 132 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 MORN5Q5VZ52 161 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 CLEC19AQ6UXS0 136 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 C21orf62Q9NYP8 219 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 PEF1Q9UBV8 284 aaKnown RBP12.94□□□□□ -0.34
EPHB4-204ENST00000477446 IGHV4OR15-8A0A075B7B6 117 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 A0A087WW49 117 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 F8W735 103 aaPredicted RBP12.94□□□□□ -0.34
EPHB4-204ENST00000477446 CCL24O00175 119 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 CLEC3BP05452 202 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 PSG1P11464 419 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 HOXA5P20719 270 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 MFAP4P55083 255 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 YPEL3P61236 119 aaPredicted RBP12.94□□□□□ -0.34
EPHB4-204ENST00000477446 OR1N2Q8NGR9 330 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 ELOVL1Q9BW60 279 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 TMEM14CQ9P0S9 112 aa12.94□□□□□ -0.34
EPHB4-204ENST00000477446 TOMM40O96008 361 aa12.93□□□□□ -0.34
EPHB4-204ENST00000477446 S100A9P06702 114 aaKnown RBP12.93□□□□□ -0.34
EPHB4-204ENST00000477446 CNN1P51911 297 aaKnown RBP12.93□□□□□ -0.34
EPHB4-204ENST00000477446 RPL19P84098 196 aaKnown RBP12.93□□□□□ -0.34
EPHB4-204ENST00000477446 MRPL27Q9P0M9 148 aaKnown RBP12.93□□□□□ -0.34
EPHB4-204ENST00000477446 A0A1W2PPQ1 181 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 LINC01619G3V211 115 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 NBEAP1P0C6P0 100 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 PYYP10082 97 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 GPR183P32249 361 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 MYCNOSP40205 109 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 FHL3Q13643 280 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 CENPWQ5EE01 88 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 FAM209BQ5JX69 171 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 DPF1Q92782 380 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 TXN2Q99757 166 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 OSTCQ9NRP0 149 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 WNK1Q9H4A3 2382 aa12.92□□□□□ -0.34
EPHB4-204ENST00000477446 PGPEP1LA6NFU8 196 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 OR2T8A6NH00 312 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 BMPR1BO00238 502 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 HIST1H2BKO60814 126 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 GCGP01275 180 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 IGKV1-17P01599 117 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 PF4P02776 101 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 HIST1H2BJP06899 126 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 HIST1H2BOP23527 126 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 S100A7P31151 101 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 FCGR2BP31994 310 aaPredicted RBP12.91□□□□□ -0.34
EPHB4-204ENST00000477446 HIST1H2BBP33778 126 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 HIST1H2BDP58876 126 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 HIST1H2BCP62807 126 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 HIST2H2BEQ16778 126 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 Q56UQ5 140 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.91□□□□□ -0.34
EPHB4-204ENST00000477446 HIST1H2BHQ93079 126 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 SMIM12Q96EX1 92 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 ATP6V0BQ99437 205 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 HIST1H2BNQ99877 126 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 HIST1H2BMQ99879 126 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 IL36BQ9NZH7 164 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 VWFP04275 2813 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 TRRAPQ9Y4A5 3859 aa12.91□□□□□ -0.34
EPHB4-204ENST00000477446 PHOX2AO14813 284 aa12.9□□□□□ -0.34
EPHB4-204ENST00000477446 TRGC1P0CF51 173 aa12.9□□□□□ -0.34
EPHB4-204ENST00000477446 ARL3P36405 182 aa12.9□□□□□ -0.34
EPHB4-204ENST00000477446 NDUFA6P56556 154 aa12.9□□□□□ -0.34
EPHB4-204ENST00000477446 LYZP61626 148 aa12.9□□□□□ -0.34
EPHB4-204ENST00000477446 SLC25A39Q9BZJ4 359 aaPredicted RBP12.9□□□□□ -0.34
EPHB4-204ENST00000477446 AURKAIP1Q9NWT8 199 aaPredicted RBP12.9□□□□□ -0.34
EPHB4-204ENST00000477446 K7EN84 100 aa12.9□□□□□ -0.35
EPHB4-204ENST00000477446 PEX7O00628 323 aa12.9□□□□□ -0.35
EPHB4-204ENST00000477446 ISLRO14498 428 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms