RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 MYO9BQ13459 2157 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 TRBV7-3A0A075B6L6 115 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 A0A0G2JRQ6 117 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 H3BS24 57 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 H7C1H1 209 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 TCL1BO95988 128 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 IGLV2-8P01709 118 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 SPTBP11277 2137 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 COX6A1P12074 109 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 PSMB8P28062 276 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 SRSF9Q13242 221 aaKnown RBP eCLIP3.29□□□□□ -1.88
CD55-208ENST00000476590 ZNF56Q15929 161 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 TMEM155Q4W5P6 130 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 THADAQ6YHU6 1953 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 Q71RC1 249 aaPredicted RBP3.29□□□□□ -1.88
CD55-208ENST00000476590 NABP1Q96AH0 204 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 RITA1Q96K30 269 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 DSCR8Q96T75 97 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 SHANK2-AS3Q9BTD1 123 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 CACNG5Q9UF02 275 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 LINC00527Q9UJ94 153 aa3.29□□□□□ -1.88
CD55-208ENST00000476590 GOLGA4Q13439 2230 aaKnown RBP3.29□□□□□ -1.88
CD55-208ENST00000476590 KIAA1549LQ6ZVL6 1849 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 COL16A1Q07092 1604 aaPredicted RBP3.28□□□□□ -1.88
CD55-208ENST00000476590 IGHV3OR15-7A0A075B7D8 119 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 IGLV1-36A0A0B4J1U3 117 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 LOC101059948A0A1B0GTJ6 334 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 hADV29S1A0JD25 119 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 HIGD1CA8MV81 97 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 K7EMI3 77 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 CCL24O00175 119 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 LGALS9O00182 355 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 IFI6P09912 130 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 DEFA4P12838 97 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 ZNF823P16415 610 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 FCER1GP30273 86 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 MAGEA5P43359 124 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 EFNA4P52798 201 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 CD164Q04900 197 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 RPL18Q07020 188 aaKnown RBP3.28□□□□□ -1.88
CD55-208ENST00000476590 HES3Q5TGS1 186 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 ZFP2Q6ZN57 461 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 ZNF818PQ6ZRF7 136 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 Q6ZSR3 168 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 SLC25A48Q6ZT89 311 aaKnown RBP3.28□□□□□ -1.88
CD55-208ENST00000476590 NT5CQ8TCD5 201 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 C2orf48Q96LS8 159 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 IGF2BP2-AS1Q96M15 143 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 TRGV9Q99603 122 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 MRPL20Q9BYC9 149 aaKnown RBP3.28□□□□□ -1.88
CD55-208ENST00000476590 HHLA3Q9XRX5 114 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 IGKV2D-26A0A0A0MRZ7 120 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 TRAV17A0A0B4J275 112 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.28□□□□□ -1.88
CD55-208ENST00000476590 C19orf71A6NCJ1 209 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 LINC01549A6NIU2 74 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 PMS2P5A8MQ11 134 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 TMEM150CB9EJG8 249 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 ATOX1O00244 68 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 EFNA2O43921 213 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 EMDP50402 254 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 ZNF138P52744 262 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 KISS1Q15726 138 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 IZUMO4Q1ZYL8 232 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 TMEM52BQ4KMG9 183 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 TMEM200BQ69YZ2 307 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 ZNF793Q6ZN11 406 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 PRSS3P2Q8NHM4 247 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 NTN5Q8WTR8 489 aaPredicted RBP3.28□□□□□ -1.88
CD55-208ENST00000476590 ZNF503Q96F45 646 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 NXT2Q9NPJ8 142 aaKnown RBP3.28□□□□□ -1.88
CD55-208ENST00000476590 ZNF355PQ9NSJ1 428 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 GNG12Q9UBI6 72 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 WDR83OSQ9Y284 106 aa3.28□□□□□ -1.88
CD55-208ENST00000476590 KLF13Q9Y2Y9 288 aaPredicted RBP3.28□□□□□ -1.88
CD55-208ENST00000476590 MPDZO75970 2070 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 RALGAPA1Q6GYQ0 2036 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 IGKV1D-42A0A075B6H8 117 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 TMEM202A6NGA9 273 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 NDUFC2-KCTD14E9PQ53 114 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 H3BMM0 161 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 SPINT2O43291 252 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 IGLV3-27P01718 113 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 PYYP10082 97 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 FKBP2P26885 142 aaKnown RBP3.27□□□□□ -1.89
CD55-208ENST00000476590 DUTP33316 252 aaKnown RBP3.27□□□□□ -1.89
CD55-208ENST00000476590 CXCL5P42830 114 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 EDDM3BP56851 147 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 TMEM170BQ5T4T1 132 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 CEMP1Q6PRD7 247 aaPredicted RBP3.27□□□□□ -1.89
CD55-208ENST00000476590 Q6ZRM9 215 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 LINC00311Q8N616 119 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 Q8N7P7 452 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 UBE2WQ96B02 151 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 IFI27L1Q96BM0 104 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 BMFQ96LC9 184 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 AAMDCQ9H7C9 122 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 PLEKHA3Q9HB20 300 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 TMEM167BQ9NRX6 74 aa3.27□□□□□ -1.89
CD55-208ENST00000476590 CALYQ9NYX4 217 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms