RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 CCNKO75909 580 aa8.62□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 CXCL3P19876 107 aa8.62□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 AZU1P20160 251 aa8.62□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 S100A7P31151 101 aa8.62□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 DAD1P61803 113 aa8.62□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 SELENOTP62341 195 aa8.62□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 AKR1C1Q04828 323 aa8.62□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 SPINK13Q1W4C9 94 aa8.62□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 PSENENQ9NZ42 101 aa8.62□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 HIGD1AQ9Y241 93 aa8.62□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 IGLV2-18A0A075B6J9 118 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 HYPMO75409 117 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 RPL7P18124 248 aaKnown RBP8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 FAM3BP58499 235 aaPredicted RBP8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 TAS2R30P59541 319 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 DLK1P80370 383 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 IFITM3Q01628 133 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 NRARPQ7Z6K4 114 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 C15orf53Q8NAA6 179 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 ZBTB8BQ8NAP8 495 aaPredicted RBP8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 OR8A1Q8NGG7 326 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 UHRF2Q96PU4 802 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 SEC22CQ9BRL7 303 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 NPVFQ9HCQ7 196 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 GSKIPQ9P0R6 139 aa8.61□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 C5orf51A6NDU8 294 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 FAM25EA8MYX2 175 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 SSSCA1O60232 199 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 SCGB1D2O95969 90 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 INSP01308 110 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 LINC00869P0C866 280 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 HTN3P15516 51 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 RAP2BP61225 183 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 ARL16Q0P5N6 197 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 PSG3Q16557 428 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 BAP18Q8IXM2 172 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 MARVELD1Q9BSK0 173 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 RYR1P21817 5038 aa8.6□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 TRAV12-2A0A075B6T6 113 aa8.59□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 INMT-MINDY4F8WBC2 141 aa8.59□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 BOLA2-SMG1P6H3BVE0 249 aa8.59□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 PXDC1Q5TGL8 231 aa8.59□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 UBE2DNLQ8IWF7 75 aa8.59□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 TMEM256Q8N2U0 113 aa8.59□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 C2orf50Q96LR7 162 aa8.59□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 TMEM208Q9BTX3 173 aa8.59□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 RCL1Q9Y2P8 373 aaKnown RBP8.59□□□□□ -1.03
MSH5-SAPCD1-205ENST00000476085 SMCO3A2RU48 225 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 CBY3A6NI87 242 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 L7N2F9 121 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 TSC22D2O75157 780 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 METTL15P1P0C7V9 234 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 PVALBP20472 110 aaPredicted RBP8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 TAS2R60P59551 318 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 VAMP2P63027 116 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 FGL1Q08830 312 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 FCN2Q15485 313 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 TEPPQ6URK8 271 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 ZNF738Q8NE65 137 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 ZNRF2Q8NHG8 242 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 GGACTQ9BVM4 153 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 ARL6Q9H0F7 186 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 ARV1Q9H2C2 271 aa8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 ZNF331Q9NQX6 463 aaPredicted RBP8.58□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 C7orf66A4D0T2 115 aa8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 CCSO14618 274 aa8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 MBPP02686 304 aaPredicted RBP8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 OR5G3P0C626 314 aa8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 CXCL2P19875 107 aa8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 RRAS2P62070 204 aaPredicted RBP8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 HIST1H1AQ02539 215 aaPredicted RBP8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 C1orf134Q5TEV5 83 aa8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 LINC00612Q8N6U2 182 aa8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 OR10P1Q8NGE3 313 aa8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 RNASE8Q8TDE3 154 aaKnown RBP8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 TMEM37Q8WXS4 190 aa8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 SAT2Q96F10 170 aaPredicted RBP8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 C11orf1Q9H5F2 150 aa8.57□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 AGPAT2O15120 278 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 PTTG1O95997 202 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 DEFB130BP0DP73 79 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 DEFB130AP0DP74 79 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 CDKN1BP46527 198 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 CYCSP99999 105 aaKnown RBP8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 SLC38A11Q08AI6 406 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 KIR3DS1Q14943 382 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 MORN5Q5VZ52 161 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 ZNF493Q6ZR52 646 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 S100A7AQ86SG5 101 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 RPUSD4Q96CM3 377 aaKnown RBP8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 LINC01587Q99440 93 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 MGST2Q99735 147 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 MGAT4CQ9UBM8 478 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 RNF24Q9Y225 148 aa8.56□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 NBDYA0A0U1RRE5 68 aa8.55□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 RLN2P04090 185 aa8.55□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 ATP5G1P05496 136 aa8.55□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 IGLC2P0DOY2 106 aa8.55□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 PRB4P10163 310 aaPredicted RBP8.55□□□□□ -1.04
MSH5-SAPCD1-205ENST00000476085 ATP5G3P48201 142 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms