RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 CYP2G1PQ6ZSU1 146 aa10.04□□□□□ -0.8
FAM3A-218ENST00000475657 SLC51BQ86UW2 128 aa10.04□□□□□ -0.8
FAM3A-218ENST00000475657 STOML3Q8TAV4 291 aa10.04□□□□□ -0.8
FAM3A-218ENST00000475657 GNPNAT1Q96EK6 184 aaPredicted RBP10.04□□□□□ -0.8
FAM3A-218ENST00000475657 TIMM9Q9Y5J7 89 aa10.04□□□□□ -0.8
FAM3A-218ENST00000475657 IGLV2-18A0A075B6J9 118 aa10.03□□□□□ -0.8
FAM3A-218ENST00000475657 ELOA3CA0A087WX78 387 aaPredicted RBP10.03□□□□□ -0.8
FAM3A-218ENST00000475657 TOMM40O96008 361 aa10.03□□□□□ -0.8
FAM3A-218ENST00000475657 CFDP00746 253 aaPredicted RBP10.03□□□□□ -0.8
FAM3A-218ENST00000475657 TPT1P13693 172 aaKnown RBP10.03□□□□□ -0.8
FAM3A-218ENST00000475657 RPL29P47914 159 aaKnown RBP10.03□□□□□ -0.8
FAM3A-218ENST00000475657 ZNF90Q03938 601 aa10.03□□□□□ -0.8
FAM3A-218ENST00000475657 TCF24Q7RTU0 167 aa10.03□□□□□ -0.8
FAM3A-218ENST00000475657 ZNF709Q8N972 641 aa10.03□□□□□ -0.8
FAM3A-218ENST00000475657 Q8WTZ3 238 aa10.03□□□□□ -0.8
FAM3A-218ENST00000475657 ST8SIA2Q92186 375 aa10.03□□□□□ -0.8
FAM3A-218ENST00000475657 GINS3Q9BRX5 216 aa10.03□□□□□ -0.8
FAM3A-218ENST00000475657 ARV1Q9H2C2 271 aa10.03□□□□□ -0.8
FAM3A-218ENST00000475657 SLC45A2Q9UMX9 530 aa10.03□□□□□ -0.8
FAM3A-218ENST00000475657 RD3LP0DJH9 198 aa10.02□□□□□ -0.81
FAM3A-218ENST00000475657 RPL11P62913 178 aaKnown RBP10.02□□□□□ -0.81
FAM3A-218ENST00000475657 C12orf74Q32Q52 190 aa10.02□□□□□ -0.81
FAM3A-218ENST00000475657 RNF212Q495C1 297 aa10.02□□□□□ -0.81
FAM3A-218ENST00000475657 FAM90A2PQ658T7 463 aa10.02□□□□□ -0.81
FAM3A-218ENST00000475657 LEMD1Q68G75 181 aa10.02□□□□□ -0.81
FAM3A-218ENST00000475657 TOMM20LQ6UXN7 152 aa10.02□□□□□ -0.81
FAM3A-218ENST00000475657 HSD17B11Q8NBQ5 300 aa10.02□□□□□ -0.81
FAM3A-218ENST00000475657 BPIFCQ8NFQ6 507 aa10.02□□□□□ -0.81
FAM3A-218ENST00000475657 PSMG3Q9BT73 122 aaPredicted RBP10.02□□□□□ -0.81
FAM3A-218ENST00000475657 GIG44P09565 113 aaPredicted RBP10.01□□□□□ -0.81
FAM3A-218ENST00000475657 PSG1P11464 419 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 ATP6V0CP27449 155 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 PXDC1Q5TGL8 231 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 BAP18Q8IXM2 172 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 FAM24BQ8N5W8 94 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 OR51G1Q8NGK1 321 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 OR2G3Q8NGZ4 309 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 FAM210BQ96KR6 192 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 RSG1Q9BU20 258 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 BOLA1Q9Y3E2 137 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 PUS1Q9Y606 427 aaKnown RBP eCLIP10.01□□□□□ -0.81
FAM3A-218ENST00000475657 PXMP4Q9Y6I8 212 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 X6R8D5 127 aa10.01□□□□□ -0.81
FAM3A-218ENST00000475657 CD5P06127 495 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 LINC00869P0C866 280 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 SPP1P10451 314 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 DEFB131AP59861 70 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 B2MP61769 119 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 PAFAH1B2P68402 229 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 TNP2Q05952 138 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 MIC13Q5XKP0 118 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 EIF5AL1Q6IS14 154 aaKnown RBP10□□□□□ -0.81
FAM3A-218ENST00000475657 MORN3Q6PF18 240 aaPredicted RBP10□□□□□ -0.81
FAM3A-218ENST00000475657 UBE2DNLQ8IWF7 75 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 RNF125Q96EQ8 232 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 MS4A6AQ9H2W1 248 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 ZFAND3Q9H8U3 227 aa10□□□□□ -0.81
FAM3A-218ENST00000475657 DNASE2O00115 360 aaPredicted RBP9.99□□□□□ -0.81
FAM3A-218ENST00000475657 IL4P05112 153 aa9.99□□□□□ -0.81
FAM3A-218ENST00000475657 SEC11BP0C7V7 166 aa9.99□□□□□ -0.81
FAM3A-218ENST00000475657 GATA2P23769 480 aaPredicted RBP9.99□□□□□ -0.81
FAM3A-218ENST00000475657 PLP1P60201 277 aa9.99□□□□□ -0.81
FAM3A-218ENST00000475657 SERF2P84101 59 aa9.99□□□□□ -0.81
FAM3A-218ENST00000475657 TMEM182Q6ZP80 229 aaPredicted RBP9.99□□□□□ -0.81
FAM3A-218ENST00000475657 Q6ZRG5 221 aa9.99□□□□□ -0.81
FAM3A-218ENST00000475657 PHYHIPLQ96FC7 376 aa9.99□□□□□ -0.81
FAM3A-218ENST00000475657 SH3BGRL3Q9H299 93 aa9.99□□□□□ -0.81
FAM3A-218ENST00000475657 SLC39A9Q9NUM3 307 aa9.99□□□□□ -0.81
FAM3A-218ENST00000475657 RABAC1Q9UI14 185 aa9.99□□□□□ -0.81
FAM3A-218ENST00000475657 AGRNO00468 2067 aa9.98□□□□□ -0.81
FAM3A-218ENST00000475657 TRAV2A0A0B4J234 112 aa9.98□□□□□ -0.81
FAM3A-218ENST00000475657 OR1L4Q8NGR5 311 aa9.98□□□□□ -0.81
FAM3A-218ENST00000475657 PFDN5Q99471 154 aa9.98□□□□□ -0.81
FAM3A-218ENST00000475657 SCRT1Q9BWW7 348 aa9.98□□□□□ -0.81
FAM3A-218ENST00000475657 SLC25A32Q9H2D1 315 aa9.98□□□□□ -0.81
FAM3A-218ENST00000475657 CELA1Q9UNI1 258 aa9.98□□□□□ -0.81
FAM3A-218ENST00000475657 SRRM2Q9UQ35 2752 aaKnown RBP9.97□□□□□ -0.81
FAM3A-218ENST00000475657 MBP02144 154 aa9.97□□□□□ -0.81
FAM3A-218ENST00000475657 LYZP61626 148 aa9.97□□□□□ -0.81
FAM3A-218ENST00000475657 USF2Q15853 346 aaPredicted RBP9.97□□□□□ -0.81
FAM3A-218ENST00000475657 FFAR4Q5NUL3 377 aa9.97□□□□□ -0.81
FAM3A-218ENST00000475657 S100A7AQ86SG5 101 aa9.97□□□□□ -0.81
FAM3A-218ENST00000475657 STHQ8IWL8 128 aa9.97□□□□□ -0.81
FAM3A-218ENST00000475657 PBDC1Q9BVG4 233 aa9.97□□□□□ -0.81
FAM3A-218ENST00000475657 VSIRQ9H7M9 311 aa9.97□□□□□ -0.81
FAM3A-218ENST00000475657 UMAD1C9J7I0 102 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 COX7A2P2O60397 106 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 HYPMO75409 117 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 M6PRP20645 277 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 NPPCP23582 126 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 S100A7P31151 101 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 ACOT6Q3I5F7 207 aaPredicted RBP9.96□□□□□ -0.82
FAM3A-218ENST00000475657 ZNF767PQ75MW2 155 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 TRPT1Q86TN4 253 aaKnown RBP9.96□□□□□ -0.82
FAM3A-218ENST00000475657 CSNK1G2-AS1Q8NCQ2 148 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 STXBP6Q8NFX7 210 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 OR1B1Q8NGR6 318 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 TMED6Q8WW62 240 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 METTL26Q96S19 204 aa9.96□□□□□ -0.82
FAM3A-218ENST00000475657 PFDN2Q9UHV9 154 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms