RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 WFDC12Q8WWY7 111 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 C17orf77Q96MU5 243 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 AAMDCQ9H7C9 122 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 RPS10P5Q9NQ39 176 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 DAZ1Q9NQZ3 744 aaKnown RBP10.51□□□□□ -0.73
TRAF4-210ENST00000475329 EPDR1Q9UM22 224 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 UFC1Q9Y3C8 167 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 MTORP42345 2549 aa10.51□□□□□ -0.73
TRAF4-210ENST00000475329 IGHV3OR16-13A0A075B7E8 117 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 IGHV3-74A0A0B4J1X5 117 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 IGHV7-4-1A0A0J9YVY3 117 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 HELTA6NFD8 242 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 ZNF785A8K8V0 405 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 C9JCJ5 164 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 SLC17A3O00476 420 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 MEOX2P50222 304 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 GNG5P63218 68 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 REC114Q7Z4M0 266 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 EXOC3-AS1Q8N2X6 119 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 CMTM2Q8TAZ6 248 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 GLMPQ8WWB7 406 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 ATG101Q9BSB4 218 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 RPH3ALQ9UNE2 315 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 SMAD5-AS1Q9Y6J3 95 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 TEP1Q99973 2627 aaKnown RBP10.5□□□□□ -0.73
TRAF4-210ENST00000475329 C2CD3Q4AC94 2353 aa10.5□□□□□ -0.73
TRAF4-210ENST00000475329 BMI1P35226 326 aa10.49□□□□□ -0.73
TRAF4-210ENST00000475329 GNG4P50150 75 aa10.49□□□□□ -0.73
TRAF4-210ENST00000475329 RPL23P62829 140 aaKnown RBP10.49□□□□□ -0.73
TRAF4-210ENST00000475329 KRTAP21-3Q3LHN1 58 aa10.49□□□□□ -0.73
TRAF4-210ENST00000475329 TM4SF20Q53R12 229 aa10.49□□□□□ -0.73
TRAF4-210ENST00000475329 KLHL30-AS1Q8NEE0 82 aa10.49□□□□□ -0.73
TRAF4-210ENST00000475329 LY96Q9Y6Y9 160 aa10.49□□□□□ -0.73
TRAF4-210ENST00000475329 HIVEP1P15822 2718 aa10.49□□□□□ -0.73
TRAF4-210ENST00000475329 TRBV20OR9-2A0A075B6H5 130 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 A0A087WWC5 75 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 A8MWP6 167 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 LINC01619G3V211 115 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 LGALS9O00182 355 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 TCRAP04437 139 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 S100A9P06702 114 aaKnown RBP10.48□□□□□ -0.73
TRAF4-210ENST00000475329 HOXD3P31249 432 aaPredicted RBP10.48□□□□□ -0.73
TRAF4-210ENST00000475329 TAS2R60P59551 318 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 BTN1A1Q13410 526 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 CENPWQ5EE01 88 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 C18orf65Q6ZTR6 163 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 LINC01551Q86U37 167 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 C1QL4Q86Z23 238 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 SLC50A1Q9BRV3 221 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 SMPXQ9UHP9 88 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 RNF114Q9Y508 228 aa10.48□□□□□ -0.73
TRAF4-210ENST00000475329 NSD1Q96L73 2696 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-210ENST00000475329 CD28P10747 220 aa10.47□□□□□ -0.73
TRAF4-210ENST00000475329 UBE2G1P62253 170 aa10.47□□□□□ -0.73
TRAF4-210ENST00000475329 TMEM183BQ1AE95 376 aa10.47□□□□□ -0.73
TRAF4-210ENST00000475329 DEFB136Q30KP8 78 aa10.47□□□□□ -0.73
TRAF4-210ENST00000475329 DPF1Q92782 380 aa10.47□□□□□ -0.73
TRAF4-210ENST00000475329 IGF2BP2-AS1Q96M15 143 aa10.47□□□□□ -0.73
TRAF4-210ENST00000475329 RHPN1-AS1Q9BWJ2 59 aa10.47□□□□□ -0.73
TRAF4-210ENST00000475329 SMCO4Q9NRQ5 59 aa10.47□□□□□ -0.73
TRAF4-210ENST00000475329 PRELID1Q9Y255 219 aa10.47□□□□□ -0.73
TRAF4-210ENST00000475329 TMEM213A2RRL7 107 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 PGPEP1LA6NFU8 196 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 K7EQM0 130 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 DNASE2O00115 360 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-210ENST00000475329 HAX1O00165 279 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 CHEK1O14757 476 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 CSN1S1P47710 185 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 SYNJ2BPP57105 145 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 TMEM88Q6PEY1 159 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 CBLN2Q8IUK8 224 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 ARL6IP6Q8N6S5 226 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 OR1N2Q8NGR9 330 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 FMC1Q96HJ9 113 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 ZNF331Q9NQX6 463 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-210ENST00000475329 KLF12Q9Y4X4 402 aa10.46□□□□□ -0.73
TRAF4-210ENST00000475329 TRAV34A0A0B4J273 112 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 SERTM2A0A1B0GWG4 89 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 ISLRO14498 428 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 TSPAN4O14817 238 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 MT-ND4LP03901 98 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 SLURP1P55000 103 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 PROK1P58294 105 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 KLF5Q13887 457 aaPredicted RBP10.45□□□□□ -0.74
TRAF4-210ENST00000475329 C8orf86Q6ZUL3 223 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 GOLT1AQ6ZVE7 132 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 OR11H1Q8NG94 326 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 OCC1Q8TAD7 63 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 ISOC2Q96AB3 205 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 LINC00479Q96M42 142 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 CTDSP1Q9GZU7 261 aa10.45□□□□□ -0.74
TRAF4-210ENST00000475329 TSSC4Q9Y5U2 329 aaPredicted RBP10.45□□□□□ -0.74
TRAF4-210ENST00000475329 FN1P02751 2386 aaKnown RBP10.45□□□□□ -0.74
TRAF4-210ENST00000475329 DIRC3C9JPN6 131 aa10.44□□□□□ -0.74
TRAF4-210ENST00000475329 M0R3E3 92 aa10.44□□□□□ -0.74
TRAF4-210ENST00000475329 RNF212Q495C1 297 aa10.44□□□□□ -0.74
TRAF4-210ENST00000475329 C11orf44Q8N8P7 122 aa10.44□□□□□ -0.74
TRAF4-210ENST00000475329 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.44□□□□□ -0.74
TRAF4-210ENST00000475329 TMEM75Q8N9X5 138 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms