RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MDS2Q8NDY4 140 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 C6orf226Q5I0X4 101 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 Q6P435 159 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 SPSB3Q6PJ21 355 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 HIST1H2BLQ99880 126 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 LAMTOR3Q9UHA4 124 aa8.94□□□□□ -0.98
VAPB-204ENST00000475243 GHRHP01286 108 aa8.93□□□□□ -0.98
VAPB-204ENST00000475243 Q5PR19 223 aa8.93□□□□□ -0.98
VAPB-204ENST00000475243 SSC4DQ8WTU2 575 aa8.93□□□□□ -0.98
VAPB-204ENST00000475243 CDK2AP2O75956 126 aa8.93□□□□□ -0.98
VAPB-204ENST00000475243 TEX43Q6ZNM6 134 aa8.93□□□□□ -0.98
VAPB-204ENST00000475243 LINC01356Q8N9X3 169 aa8.93□□□□□ -0.98
VAPB-204ENST00000475243 HIST1H4AP62805 103 aaKnown RBP8.93□□□□□ -0.98
VAPB-204ENST00000475243 LINC00479Q96M42 142 aa8.93□□□□□ -0.98
VAPB-204ENST00000475243 PSG3Q16557 428 aa8.93□□□□□ -0.98
VAPB-204ENST00000475243 ADAMTS9Q9P2N4 1935 aa8.93□□□□□ -0.98
VAPB-204ENST00000475243 C1orf122Q6ZSJ8 110 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 LHFPL1Q86WI0 220 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 A0A087X0K7 114 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 M0R1W7 72 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 RHPN1-AS1Q9BWJ2 59 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 DKK1O94907 266 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 TOMM40O96008 361 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 ZNF479Q96JC4 524 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 LINC00477Q96M19 166 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 SPXQ9BT56 116 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 SP5Q6BEB4 398 aaPredicted RBP8.92□□□□□ -0.98
VAPB-204ENST00000475243 IGHV3-16A0A0C4DH30 117 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 WNK1Q9H4A3 2382 aa8.92□□□□□ -0.98
VAPB-204ENST00000475243 A8MWV9 139 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 NMSQ5H8A3 153 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 LINC01551Q86U37 167 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 MSRB2Q9Y3D2 182 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 PRTN3P24158 256 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 CMC4P56277 68 aaPredicted RBP8.91□□□□□ -0.98
VAPB-204ENST00000475243 GUSBP1Q15486 140 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 TMEM256Q8N2U0 113 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 TMEM158Q8WZ71 300 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 DEFB131AP59861 70 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 AMN1Q8IY45 258 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 PLXNA4Q9HCM2 1894 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 KNCNA6PVL3 124 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 VCYO14598 125 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 FGF16O43320 207 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 USMG5Q96IX5 58 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 ATXN8Q156A1 80 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 GAGE13Q4V321 117 aa8.91□□□□□ -0.98
VAPB-204ENST00000475243 MPZP25189 248 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 OVOL3O00110 214 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 B3GALT5-AS1P59052 145 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 SSBP2P81877 361 aaPredicted RBP8.9□□□□□ -0.98
VAPB-204ENST00000475243 BCL6BQ8N143 479 aaPredicted RBP8.9□□□□□ -0.98
VAPB-204ENST00000475243 MBD3L4A6NDZ8 208 aaPredicted RBP8.9□□□□□ -0.98
VAPB-204ENST00000475243 MBD3L3A6NE82 208 aaPredicted RBP8.9□□□□□ -0.98
VAPB-204ENST00000475243 MBD3L5A6NJ08 208 aaPredicted RBP8.9□□□□□ -0.98
VAPB-204ENST00000475243 CD5P06127 495 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 MBD3L2Q8NHZ7 208 aaPredicted RBP8.9□□□□□ -0.98
VAPB-204ENST00000475243 ZNF48Q96MX3 618 aaPredicted RBP8.9□□□□□ -0.98
VAPB-204ENST00000475243 XCL2Q9UBD3 114 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 MALRD1Q5VYJ5 2156 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 A0A0G2JRQ6 117 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 TMEM238C9JI98 176 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 AMBPP02760 352 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 RPRMLQ8N4K4 120 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 NDUFAF3Q9BU61 184 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 CYTL1Q9NRR1 136 aa8.9□□□□□ -0.98
VAPB-204ENST00000475243 C17orf82Q86X59 251 aaPredicted RBP8.9□□□□□ -0.99
VAPB-204ENST00000475243 IL17RELQ6ZVW7 336 aa8.9□□□□□ -0.99
VAPB-204ENST00000475243 Q96MF0 132 aa8.9□□□□□ -0.99
VAPB-204ENST00000475243 C15orf62A8K5M9 175 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 NLRC5Q86WI3 1866 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 UBE2CO00762 179 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 HS3ST6Q96QI5 342 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 ANAPC13Q9BS18 74 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 GPR179Q6PRD1 2367 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 FAM223BA6NKX1 122 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 ITGB1BP1O14713 200 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 SPINK13Q1W4C9 94 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 FAM223AQ8IWN6 122 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 HIST3H2BBQ8N257 126 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 C9orf139Q6ZV77 190 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 HSD52Q0P140 79 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 TMEM14EPQ6UXP3 125 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 DENND4CQ5VZ89 1909 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 Q6ZS92 163 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 FRMPD3Q5JV73 1810 aa8.89□□□□□ -0.99
VAPB-204ENST00000475243 DTX1Q86Y01 620 aa8.88□□□□□ -0.99
VAPB-204ENST00000475243 SRCAPQ6ZRS2 3230 aa8.88□□□□□ -0.99
VAPB-204ENST00000475243 MS4A6AQ9H2W1 248 aa8.88□□□□□ -0.99
VAPB-204ENST00000475243 RNASE2P10153 161 aaKnown RBP8.88□□□□□ -0.99
VAPB-204ENST00000475243 Q6ZRM9 215 aa8.88□□□□□ -0.99
VAPB-204ENST00000475243 C8orf49Q96NF6 230 aa8.88□□□□□ -0.99
VAPB-204ENST00000475243 OOSP1A8MZH6 123 aa8.88□□□□□ -0.99
VAPB-204ENST00000475243 F5H768 121 aa8.88□□□□□ -0.99
VAPB-204ENST00000475243 A0A1W2PPI3 338 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 FAM90A2PQ658T7 463 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 RASL10AQ92737 203 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 SIGMAR1Q99720 223 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 LIME1Q9H400 295 aa8.87□□□□□ -0.99
VAPB-204ENST00000475243 KLK9Q9UKQ9 250 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms