RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 HLA-DMBP28068 263 aa11.83□□□□□ -0.52
SRM-204ENST00000475189 EBLN2Q6P2I7 272 aa11.83□□□□□ -0.52
SRM-204ENST00000475189 LCN15Q6UWW0 184 aa11.83□□□□□ -0.52
SRM-204ENST00000475189 OR2T35Q8NGX2 323 aa11.83□□□□□ -0.52
SRM-204ENST00000475189 CLUHP3Q96NS8 147 aa11.83□□□□□ -0.52
SRM-204ENST00000475189 RARRES2Q99969 163 aa11.83□□□□□ -0.52
SRM-204ENST00000475189 G3V3Q6 166 aa11.82□□□□□ -0.52
SRM-204ENST00000475189 H3BTX0 84 aa11.82□□□□□ -0.52
SRM-204ENST00000475189 NUTF2P61970 127 aaKnown RBP11.82□□□□□ -0.52
SRM-204ENST00000475189 PSG3Q16557 428 aa11.82□□□□□ -0.52
SRM-204ENST00000475189 FAM78BQ5VT40 261 aa11.82□□□□□ -0.52
SRM-204ENST00000475189 CSNK1G2-AS1Q8NCQ2 148 aa11.82□□□□□ -0.52
SRM-204ENST00000475189 OR4B1Q8NGF8 309 aa11.82□□□□□ -0.52
SRM-204ENST00000475189 OR11H2Q8NH07 326 aa11.82□□□□□ -0.52
SRM-204ENST00000475189 SAT2Q96F10 170 aaPredicted RBP11.82□□□□□ -0.52
SRM-204ENST00000475189 HRH4Q9H3N8 390 aa11.82□□□□□ -0.52
SRM-204ENST00000475189 ZNF331Q9NQX6 463 aaPredicted RBP11.82□□□□□ -0.52
SRM-204ENST00000475189 CLEC5AQ9NY25 188 aa11.82□□□□□ -0.52
SRM-204ENST00000475189 RFNGQ9Y644 331 aa11.82□□□□□ -0.52
SRM-204ENST00000475189 CSMD3Q7Z407 3707 aa11.82□□□□□ -0.52
SRM-204ENST00000475189 FXYD6-FXYD2A0A087WZ82 144 aa11.81□□□□□ -0.52
SRM-204ENST00000475189 A0A0J9YWU9 116 aa11.81□□□□□ -0.52
SRM-204ENST00000475189 A8MTW9 85 aa11.81□□□□□ -0.52
SRM-204ENST00000475189 SLC17A3O00476 420 aa11.81□□□□□ -0.52
SRM-204ENST00000475189 FFAR4Q5NUL3 377 aa11.81□□□□□ -0.52
SRM-204ENST00000475189 MIR17HGQ75NE6 70 aa11.81□□□□□ -0.52
SRM-204ENST00000475189 ZNF738Q8NE65 137 aa11.81□□□□□ -0.52
SRM-204ENST00000475189 SLC50A1Q9BRV3 221 aa11.81□□□□□ -0.52
SRM-204ENST00000475189 ZNF586Q9NXT0 402 aa11.81□□□□□ -0.52
SRM-204ENST00000475189 TMEM14CQ9P0S9 112 aa11.81□□□□□ -0.52
SRM-204ENST00000475189 XCL2Q9UBD3 114 aa11.81□□□□□ -0.52
SRM-204ENST00000475189 RNF222A6NCQ9 220 aa11.8□□□□□ -0.52
SRM-204ENST00000475189 FXYD7P58549 80 aa11.8□□□□□ -0.52
SRM-204ENST00000475189 GUK1Q16774 197 aa11.8□□□□□ -0.52
SRM-204ENST00000475189 FAM167A-AS1Q96KT0 104 aa11.8□□□□□ -0.52
SRM-204ENST00000475189 SLC25A2Q9BXI2 301 aa11.8□□□□□ -0.52
SRM-204ENST00000475189 C1QTNF4Q9BXJ3 329 aa11.8□□□□□ -0.52
SRM-204ENST00000475189 TNFSF18Q9UNG2 199 aa11.8□□□□□ -0.52
SRM-204ENST00000475189 ZNF705DP0CH99 300 aaPredicted RBP11.79□□□□□ -0.52
SRM-204ENST00000475189 ZNF705BP0CI00 300 aaPredicted RBP11.79□□□□□ -0.52
SRM-204ENST00000475189 PYYP10082 97 aa11.79□□□□□ -0.52
SRM-204ENST00000475189 PSG9Q00887 426 aa11.79□□□□□ -0.52
SRM-204ENST00000475189 INO80EQ8NBZ0 244 aaPredicted RBP11.79□□□□□ -0.52
SRM-204ENST00000475189 MRPL32Q9BYC8 188 aaKnown RBP11.79□□□□□ -0.52
SRM-204ENST00000475189 SLC35B3Q9H1N7 401 aa11.79□□□□□ -0.52
SRM-204ENST00000475189 FUT9Q9Y231 359 aa11.79□□□□□ -0.52
SRM-204ENST00000475189 KMT2CQ8NEZ4 4911 aaKnown RBP11.79□□□□□ -0.52
SRM-204ENST00000475189 STARD9Q9P2P6 4700 aa11.79□□□□□ -0.52
SRM-204ENST00000475189 TRBV19A0A075B6N1 114 aa11.78□□□□□ -0.52
SRM-204ENST00000475189 ZNF705FA8MVS1 300 aaPredicted RBP11.78□□□□□ -0.52
SRM-204ENST00000475189 ZNF705EA8MWA4 302 aaPredicted RBP11.78□□□□□ -0.52
SRM-204ENST00000475189 ZNF253O75346 499 aa11.78□□□□□ -0.52
SRM-204ENST00000475189 DUSP14O95147 198 aaKnown RBP11.78□□□□□ -0.52
SRM-204ENST00000475189 PRB4P10163 310 aaPredicted RBP11.78□□□□□ -0.52
SRM-204ENST00000475189 HIST1H1EP10412 219 aaKnown RBP11.78□□□□□ -0.52
SRM-204ENST00000475189 CNN1P51911 297 aaKnown RBP11.78□□□□□ -0.52
SRM-204ENST00000475189 ZNF266Q14584 549 aa11.78□□□□□ -0.52
SRM-204ENST00000475189 CASC10Q5T4H9 136 aa11.78□□□□□ -0.52
SRM-204ENST00000475189 AMTNQ6UX39 209 aa11.78□□□□□ -0.52
SRM-204ENST00000475189 OR8A1Q8NGG7 326 aa11.78□□□□□ -0.52
SRM-204ENST00000475189 RPUSD4Q96CM3 377 aaKnown RBP11.78□□□□□ -0.52
SRM-204ENST00000475189 TIMM9Q9Y5J7 89 aa11.78□□□□□ -0.52
SRM-204ENST00000475189 SMLR1H3BR10 107 aa11.77□□□□□ -0.53
SRM-204ENST00000475189 ZFAND6Q6FIF0 208 aa11.77□□□□□ -0.53
SRM-204ENST00000475189 IL17DQ8TAD2 202 aa11.77□□□□□ -0.53
SRM-204ENST00000475189 MFFQ9GZY8 342 aa11.77□□□□□ -0.53
SRM-204ENST00000475189 OR51M1Q9H341 326 aa11.77□□□□□ -0.53
SRM-204ENST00000475189 X6R8D5 127 aa11.77□□□□□ -0.53
SRM-204ENST00000475189 PRAC2D3DTV9 90 aa11.76□□□□□ -0.53
SRM-204ENST00000475189 NDUFB4O95168 129 aa11.76□□□□□ -0.53
SRM-204ENST00000475189 RHOBP62745 196 aa11.76□□□□□ -0.53
SRM-204ENST00000475189 Q8NAQ8 132 aa11.76□□□□□ -0.53
SRM-204ENST00000475189 HSD17B11Q8NBQ5 300 aa11.76□□□□□ -0.53
SRM-204ENST00000475189 C11orf68Q9H3H3 251 aaKnown RBP11.76□□□□□ -0.53
SRM-204ENST00000475189 M6PRP20645 277 aa11.75□□□□□ -0.53
SRM-204ENST00000475189 ATP6V0CP27449 155 aa11.75□□□□□ -0.53
SRM-204ENST00000475189 HIST1H1AQ02539 215 aaPredicted RBP11.75□□□□□ -0.53
SRM-204ENST00000475189 PDE6HQ13956 83 aa11.75□□□□□ -0.53
SRM-204ENST00000475189 ACOT6Q3I5F7 207 aaPredicted RBP11.75□□□□□ -0.53
SRM-204ENST00000475189 BLNKQ8WV28 456 aa11.75□□□□□ -0.53
SRM-204ENST00000475189 ZNF503Q96F45 646 aa11.75□□□□□ -0.53
SRM-204ENST00000475189 PAXXQ9BUH6 204 aa11.75□□□□□ -0.53
SRM-204ENST00000475189 IGHV4-28A0A0C4DH34 117 aa11.74□□□□□ -0.53
SRM-204ENST00000475189 DEFB4AO15263 64 aa11.74□□□□□ -0.53
SRM-204ENST00000475189 NBEAP1P0C6P0 100 aa11.74□□□□□ -0.53
SRM-204ENST00000475189 MIFP14174 115 aa11.74□□□□□ -0.53
SRM-204ENST00000475189 RAB2AP61019 212 aa11.74□□□□□ -0.53
SRM-204ENST00000475189 RPL7L1Q6DKI1 246 aaKnown RBP11.74□□□□□ -0.53
SRM-204ENST00000475189 ZNF705AQ6ZN79 300 aaPredicted RBP11.74□□□□□ -0.53
SRM-204ENST00000475189 OR2G3Q8NGZ4 309 aa11.74□□□□□ -0.53
SRM-204ENST00000475189 RNF141Q8WVD5 230 aa11.74□□□□□ -0.53
SRM-204ENST00000475189 FXYD5Q96DB9 178 aa11.74□□□□□ -0.53
SRM-204ENST00000475189 PSMG3Q9BT73 122 aaPredicted RBP11.74□□□□□ -0.53
SRM-204ENST00000475189 M0R2Z0 102 aa11.73□□□□□ -0.53
SRM-204ENST00000475189 ARPC5O15511 151 aa11.73□□□□□ -0.53
SRM-204ENST00000475189 OR7C2O60412 319 aa11.73□□□□□ -0.53
SRM-204ENST00000475189 EIF3GO75821 320 aaKnown RBP eCLIP11.73□□□□□ -0.53
SRM-204ENST00000475189 OR10J4P0C629 311 aa11.73□□□□□ -0.53
SRM-204ENST00000475189 RBMY1A1P0DJD3 496 aaKnown RBP11.73□□□□□ -0.53
SRM-204ENST00000475189 RBMY1CP0DJD4 496 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms