RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 TRAV8-6A0A0B4J262 113 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 PGLYRP1O75594 196 aaPredicted RBP5.21□□□□□ -1.58
USP54-211ENST00000474929 OR5AC1P0C628 307 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 RD3LP0DJH9 198 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 S100GP29377 79 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 S100A7P31151 101 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 CRYBA4P53673 196 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 TIRAPP58753 221 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 RHOBP62745 196 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 WFDC2Q14508 124 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 PSG3Q16557 428 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 C14orf177Q52M58 125 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 PHLDA2Q53GA4 152 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 ETFRF1Q6IPR1 90 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 ZNF818PQ6ZRF7 136 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 C9orf47Q6ZRZ4 202 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 Q6ZTI0 123 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 H2BFWTQ7Z2G1 175 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 OR8I2Q8N0Y5 310 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 OR51G1Q8NGK1 321 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 DYNC2LI1Q8TCX1 351 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 FCAMRQ8WWV6 532 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 RMI2Q96E14 147 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 DIRAS2Q96HU8 199 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 ST6GAL2Q96JF0 529 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 ENY2Q9NPA8 101 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 ANAPC10Q9UM13 185 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 FUT9Q9Y231 359 aa5.21□□□□□ -1.58
USP54-211ENST00000474929 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 LECT2O14960 151 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 CD3DP04234 171 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 FABP1P07148 127 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 RCVRNP35243 200 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 LPAR6P43657 344 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 SMCPP49901 116 aaPredicted RBP5.2□□□□□ -1.58
USP54-211ENST00000474929 RND2P52198 227 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 IL18Q14116 193 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 RGS21Q2M5E4 152 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 MCFD2Q8NI22 146 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 GPR82Q96P67 336 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 VGLL1Q99990 258 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 PYGO2Q9BRQ0 406 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 SLC25A39Q9BZJ4 359 aaPredicted RBP5.2□□□□□ -1.58
USP54-211ENST00000474929 MTFP1Q9UDX5 166 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 HHLA3Q9XRX5 114 aa5.2□□□□□ -1.58
USP54-211ENST00000474929 TRGV1A0A0A0MS02 117 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 TRAV8-1A0A0A6YYK1 113 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 K7EQD1 137 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 GPR31O00270 319 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 RLN1P04808 185 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 RNASE2P10153 161 aaKnown RBP5.19□□□□□ -1.58
USP54-211ENST00000474929 PGAM2P15259 253 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 PI3P19957 117 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 PPT1P50897 306 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 KRTAP10-8P60410 259 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 SCGB2B2Q4G0G5 96 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 RNASE10Q5GAN6 216 aaKnown RBP5.19□□□□□ -1.58
USP54-211ENST00000474929 STEAP1BQ6NZ63 245 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 LPCAT3Q6P1A2 487 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 ZNF738Q8NE65 137 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 OR4D10Q8NGI6 311 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 RNASEH2CQ8TDP1 164 aaKnown RBP5.19□□□□□ -1.58
USP54-211ENST00000474929 C15orf40Q8WUR7 153 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 PBDC1Q9BVG4 233 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 SLIRPQ9GZT3 109 aaKnown RBP5.19□□□□□ -1.58
USP54-211ENST00000474929 SLC25A31Q9H0C2 315 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 FXYD6Q9H0Q3 95 aa5.19□□□□□ -1.58
USP54-211ENST00000474929 CCDC59Q9P031 241 aaKnown RBP5.19□□□□□ -1.58
USP54-211ENST00000474929 MRPL36Q9P0J6 103 aaKnown RBP5.19□□□□□ -1.58
USP54-211ENST00000474929 FABP12A6NFH5 140 aa5.18□□□□□ -1.58
USP54-211ENST00000474929 GABARAPH6UMI1 98 aa5.18□□□□□ -1.58
USP54-211ENST00000474929 RAB3DO95716 219 aa5.18□□□□□ -1.58
USP54-211ENST00000474929 HTR2BP41595 481 aa5.18□□□□□ -1.58
USP54-211ENST00000474929 HIST1H1AQ02539 215 aaPredicted RBP5.18□□□□□ -1.58
USP54-211ENST00000474929 FAAP20Q6NZ36 180 aa5.18□□□□□ -1.58
USP54-211ENST00000474929 FAM122CQ6P4D5 195 aa5.18□□□□□ -1.58
USP54-211ENST00000474929 TBC1D26Q86UD7 250 aa5.18□□□□□ -1.58
USP54-211ENST00000474929 TMEM229BQ8NBD8 167 aa5.18□□□□□ -1.58
USP54-211ENST00000474929 BLNKQ8WV28 456 aa5.18□□□□□ -1.58
USP54-211ENST00000474929 C20orf173Q96LM9 149 aa5.18□□□□□ -1.58
USP54-211ENST00000474929 MRPL32Q9BYC8 188 aaKnown RBP5.18□□□□□ -1.58
USP54-211ENST00000474929 SH3BGRL3Q9H299 93 aa5.18□□□□□ -1.58
USP54-211ENST00000474929 TRGV4A0A0C4DH28 118 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 RNF222A6NCQ9 220 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 TAAR5O14804 337 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 PRAF2O60831 178 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 ATG12O94817 140 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 SEC11BP0C7V7 166 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 PSG1P11464 419 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 UCP3P55916 312 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 TAS2R19P59542 299 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 SP6Q3SY56 376 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 PYDC2Q56P42 97 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 PRSS54Q6PEW0 395 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 NOXA1Q86UR1 476 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 OR8A1Q8NGG7 326 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 OR4D5Q8NGN0 318 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 OR1B1Q8NGR6 318 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 TERB2Q8NHR7 220 aa5.17□□□□□ -1.58
USP54-211ENST00000474929 MARCH1Q8TCQ1 289 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms