RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 COL25A1Q9BXS0 654 aaPredicted RBP3.17□□□□□ -1.9
USP16-205ENST00000474835 FBXL15Q9H469 300 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 OCIAD1Q9NX40 245 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 TEX22C9J3V5 150 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 MT-CO2P00403 227 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 MT-CO3P00414 261 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 ASIPP42127 132 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 MRPL51Q4U2R6 128 aaKnown RBP3.17□□□□□ -1.9
USP16-205ENST00000474835 DTX2Q86UW9 622 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 SLC25A45Q8N413 288 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 TPPP3Q9BW30 176 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 FSCN3Q9NQT6 498 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 DKK2Q9UBU2 259 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 TRAPPC2LQ9UL33 140 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 FREM1Q5H8C1 2179 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 IGHV7-4-1A0A0J9YVY3 117 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 FABP5P3A8MUU1 101 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 A8MWL6 223 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 TLX3O43711 291 aaPredicted RBP3.17□□□□□ -1.9
USP16-205ENST00000474835 TSHBP01222 138 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 SMIM13P0DJ93 91 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 IFI27P40305 119 aaPredicted RBP3.17□□□□□ -1.9
USP16-205ENST00000474835 SH2D6Q7Z4S9 175 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 OR10X1Q8NGY0 326 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 ARPC1AQ92747 370 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 EDA2RQ9HAV5 297 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 OTORQ9NRC9 128 aa3.17□□□□□ -1.9
USP16-205ENST00000474835 TMEM262E9PQX1 116 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 H3BRN7 92 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 I3L2K1 104 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 K7EMI3 77 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 HSBP1O75506 76 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 ZFAND5O76080 213 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 GAS8-AS1O95177 125 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 IGHV3-30P01768 117 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 RFPL3SP0C7P2 107 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 ARMS2P0C7Q2 107 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 IGHV3-30-5P0DP03 117 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 FCER1GP30273 86 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 NDUFV3P56181 108 aaKnown RBP3.16□□□□□ -1.9
USP16-205ENST00000474835 TMEM108Q6UXF1 575 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 NDUFA11Q86Y39 141 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 IGFBPL1Q8WX77 278 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 TRIB1Q96RU8 372 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 FAM234AQ9H0X4 552 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 CTSZQ9UBR2 303 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 AGRNO00468 2067 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 OVOL1O14753 267 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 ZNHIT1O43257 154 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 SPINT2O43291 252 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 LGALS1P09382 135 aaKnown RBP3.16□□□□□ -1.9
USP16-205ENST00000474835 PATE4P0C8F1 98 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 CARD17Q5XLA6 110 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 ZNF788Q6ZQV5 615 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 SSBP3Q9BWW4 388 aaPredicted RBP3.16□□□□□ -1.9
USP16-205ENST00000474835 SDK2Q58EX2 2172 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 IGHV3-15A0A0B4J1V0 119 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 LY6LH3BQJ8 138 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 K7ERJ3 54 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 OXTP01178 125 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 SLC25A5P05141 298 aaKnown RBP3.16□□□□□ -1.9
USP16-205ENST00000474835 SAA2P0DJI9 122 aaPredicted RBP3.16□□□□□ -1.9
USP16-205ENST00000474835 TNFAIP6P98066 277 aaPredicted RBP3.16□□□□□ -1.9
USP16-205ENST00000474835 CATR1Q13166 79 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 Q5XG85 94 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 ZFP2Q6ZN57 461 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 TMEM263Q8WUH6 116 aaKnown RBP3.16□□□□□ -1.9
USP16-205ENST00000474835 RLN3Q8WXF3 142 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 PIGCQ92535 297 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 ZNF331Q9NQX6 463 aaPredicted RBP3.16□□□□□ -1.9
USP16-205ENST00000474835 CYSLTR1Q9Y271 337 aa3.16□□□□□ -1.9
USP16-205ENST00000474835 DOCK7Q96N67 2140 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 IGLV3-9A0A075B6K5 115 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 TRBV19A0A075B6N1 114 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 ACTL6BO94805 426 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 HBDP02042 147 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 FABP2P12104 132 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 ZNF138P52744 262 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 LINC00315P59091 139 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 SMAGPQ0VAQ4 97 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 DUX4L9Q6RFH8 374 aaPredicted RBP3.15□□□□□ -1.9
USP16-205ENST00000474835 H2BFWTQ7Z2G1 175 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 GLMPQ8WWB7 406 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 SRSF8Q9BRL6 282 aaKnown RBP3.15□□□□□ -1.9
USP16-205ENST00000474835 CRYBG3Q68DQ2 2970 aa3.15□□□□□ -1.9
USP16-205ENST00000474835 IGHV3-20A0A0C4DH32 117 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 PYYP10082 97 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 ZNF816Q0VGE8 651 aaPredicted RBP3.15□□□□□ -1.91
USP16-205ENST00000474835 LTC4SQ16873 150 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 RNASEKQ6P5S7 137 aaKnown RBP3.15□□□□□ -1.91
USP16-205ENST00000474835 TOMM6Q96B49 74 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 DCTN5Q9BTE1 182 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 PROCRQ9UNN8 238 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 KIF25-AS1Q9Y6Z4 181 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 A0A1W2PPV4 95 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 A0A1W2PQM1 296 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 EPOPA6NHQ4 379 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 CCDC179H3BU77 68 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 FCGR3BO75015 233 aa3.15□□□□□ -1.91
USP16-205ENST00000474835 NPYP01303 97 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms