RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RNF182Q8N6D2 247 aa10.08□□□□□ -0.8
USF1-205ENST00000473969 IL17DQ8TAD2 202 aa10.08□□□□□ -0.8
USF1-205ENST00000473969 C20orf173Q96LM9 149 aa10.08□□□□□ -0.8
USF1-205ENST00000473969 TNFSF18Q9UNG2 199 aa10.08□□□□□ -0.8
USF1-205ENST00000473969 FUT9Q9Y231 359 aa10.08□□□□□ -0.8
USF1-205ENST00000473969 TIMM9Q9Y5J7 89 aa10.08□□□□□ -0.8
USF1-205ENST00000473969 NBEAL2Q6ZNJ1 2754 aa10.08□□□□□ -0.8
USF1-205ENST00000473969 TRAV8-2A0A0B4J237 113 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 A0A0J9YX75 114 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 A0A1W2PPV4 95 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 F6UB75 175 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 HIST1H1EP10412 219 aaKnown RBP10.07□□□□□ -0.8
USF1-205ENST00000473969 TAS2R45P59539 299 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 DEFB1P60022 68 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 RHOBP62745 196 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 PSG9Q00887 426 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 GDF5OSQ5U4N7 250 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 MIR17HGQ75NE6 70 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 HSD17B11Q8NBQ5 300 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 OR11H2Q8NH07 326 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 MUC7Q8TAX7 377 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 C17orf77Q96MU5 243 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 CLUHP3Q96NS8 147 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 OR51M1Q9H341 326 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 EDA2RQ9HAV5 297 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 ZNF331Q9NQX6 463 aaPredicted RBP10.07□□□□□ -0.8
USF1-205ENST00000473969 TMEM14CQ9P0S9 112 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 XCL2Q9UBD3 114 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 COL7A1Q02388 2944 aa10.07□□□□□ -0.8
USF1-205ENST00000473969 C3orf84H3BNL1 204 aa10.06□□□□□ -0.8
USF1-205ENST00000473969 H3BTX0 84 aa10.06□□□□□ -0.8
USF1-205ENST00000473969 ARPC5O15511 151 aa10.06□□□□□ -0.8
USF1-205ENST00000473969 IGLC2P0DOY2 106 aa10.06□□□□□ -0.8
USF1-205ENST00000473969 RPUSD4Q96CM3 377 aaKnown RBP10.06□□□□□ -0.8
USF1-205ENST00000473969 PAXXQ9BUH6 204 aa10.06□□□□□ -0.8
USF1-205ENST00000473969 H3BQ15 152 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 TAAR5O14804 337 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 OR7C2O60412 319 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 ZNF253O75346 499 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 PYYP10082 97 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 M6PRP20645 277 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 C4BPBP20851 252 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 HIST1H1AQ02539 215 aaPredicted RBP10.05□□□□□ -0.8
USF1-205ENST00000473969 KHDC3LQ587J8 217 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 OR10J6PQ8NGY7 276 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 BLNKQ8WV28 456 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 SLC25A2Q9BXI2 301 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 MFFQ9GZY8 342 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 AAMDCQ9H7C9 122 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 ZNF586Q9NXT0 402 aa10.05□□□□□ -0.8
USF1-205ENST00000473969 TRBV19A0A075B6N1 114 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 A0A0J9YWU9 116 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 RNF222A6NCQ9 220 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 SMLR1H3BR10 107 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 MBP02144 154 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 AMBPP02760 352 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 NBEAP1P0C6P0 100 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 HLA-DMBP28068 263 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 CNN1P51911 297 aaKnown RBP10.04□□□□□ -0.8
USF1-205ENST00000473969 FXYD7P58549 80 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 PDE6HQ13956 83 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 OR8A1Q8NGG7 326 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 OR10G4Q8NGN3 311 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 OR10G9Q8NGN4 311 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 OR10G7Q8NGN6 311 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 RNF141Q8WVD5 230 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 GNPNAT1Q96EK6 184 aaPredicted RBP10.04□□□□□ -0.8
USF1-205ENST00000473969 SAT2Q96F10 170 aaPredicted RBP10.04□□□□□ -0.8
USF1-205ENST00000473969 PSMG3Q9BT73 122 aaPredicted RBP10.04□□□□□ -0.8
USF1-205ENST00000473969 PRELID1Q9Y255 219 aa10.04□□□□□ -0.8
USF1-205ENST00000473969 KMT2CQ8NEZ4 4911 aaKnown RBP10.04□□□□□ -0.8
USF1-205ENST00000473969 SLC17A3O00476 420 aa10.03□□□□□ -0.8
USF1-205ENST00000473969 JTBO76095 146 aa10.03□□□□□ -0.8
USF1-205ENST00000473969 GIG44P09565 113 aaPredicted RBP10.03□□□□□ -0.8
USF1-205ENST00000473969 ZNF705DP0CH99 300 aaPredicted RBP10.03□□□□□ -0.8
USF1-205ENST00000473969 ZNF705BP0CI00 300 aaPredicted RBP10.03□□□□□ -0.8
USF1-205ENST00000473969 ATP6V0CP27449 155 aa10.03□□□□□ -0.8
USF1-205ENST00000473969 SERF2P84101 59 aa10.03□□□□□ -0.8
USF1-205ENST00000473969 RPL7L1Q6DKI1 246 aaKnown RBP10.03□□□□□ -0.8
USF1-205ENST00000473969 SLC35B3Q9H1N7 401 aa10.03□□□□□ -0.8
USF1-205ENST00000473969 GOLT1BQ9Y3E0 138 aa10.03□□□□□ -0.8
USF1-205ENST00000473969 ZNF705FA8MVS1 300 aaPredicted RBP10.02□□□□□ -0.81
USF1-205ENST00000473969 OR10J4P0C629 311 aa10.02□□□□□ -0.81
USF1-205ENST00000473969 MIFP14174 115 aa10.02□□□□□ -0.81
USF1-205ENST00000473969 UBE2L3P68036 154 aaKnown RBP10.02□□□□□ -0.81
USF1-205ENST00000473969 FAM122CQ6P4D5 195 aa10.02□□□□□ -0.81
USF1-205ENST00000473969 OR2G3Q8NGZ4 309 aa10.02□□□□□ -0.81
USF1-205ENST00000473969 MRPL53Q96EL3 112 aaKnown RBP10.02□□□□□ -0.81
USF1-205ENST00000473969 FAM167A-AS1Q96KT0 104 aa10.02□□□□□ -0.81
USF1-205ENST00000473969 HUWE1Q7Z6Z7 4374 aaKnown RBP10.01□□□□□ -0.81
USF1-205ENST00000473969 IGHV3OR16-12A0A075B7B8 117 aa10.01□□□□□ -0.81
USF1-205ENST00000473969 HMSDA8MTL9 139 aa10.01□□□□□ -0.81
USF1-205ENST00000473969 G3V3Q6 166 aa10.01□□□□□ -0.81
USF1-205ENST00000473969 RAB2AP61019 212 aa10.01□□□□□ -0.81
USF1-205ENST00000473969 PQLC2Q6ZP29 291 aa10.01□□□□□ -0.81
USF1-205ENST00000473969 CSNK1G2-AS1Q8NCQ2 148 aa10.01□□□□□ -0.81
USF1-205ENST00000473969 TMEM208Q9BTX3 173 aa10.01□□□□□ -0.81
USF1-205ENST00000473969 RFNGQ9Y644 331 aa10.01□□□□□ -0.81
USF1-205ENST00000473969 AGRNO00468 2067 aa10.01□□□□□ -0.81
USF1-205ENST00000473969 STAB2Q8WWQ8 2551 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms