RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 A8MTW9 85 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 MRPS12O15235 138 aaKnown RBP9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 SSNA1O43805 119 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 H2BFSP57053 126 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 PSG9Q00887 426 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 FGL1Q08830 312 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 OPCMLQ14982 345 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 LRRC37A5PQ49AS3 106 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 LCN15Q6UWW0 184 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 ZNF709Q8N972 641 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 OR4B1Q8NGF8 309 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 OR1L4Q8NGR5 311 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 TMEM37Q8WXS4 190 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 C20orf173Q96LM9 149 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 DNAJC4Q9NNZ3 241 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 DNAH6Q9C0G6 4158 aa9.38□□□□□ -0.91
SHROOM3-204ENST00000473602 TRAV8-2A0A0B4J237 113 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 DUSP14O95147 198 aaKnown RBP9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 PTTG1O95997 202 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 IGKV3-20P01619 116 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 CXCL3P19876 107 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 DEFB1P60022 68 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 B2MP61769 119 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 FAM78BQ5VT40 261 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 MIC13Q5XKP0 118 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 ZNF705AQ6ZN79 300 aaPredicted RBP9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 PHLDA1Q8WV24 401 aaPredicted RBP9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 PPP1R1CQ8WVI7 109 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 NEU1Q99519 415 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 SLC50A1Q9BRV3 221 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 SLC39A9Q9NUM3 307 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 OR5AC2Q9NZP5 309 aa9.37□□□□□ -0.91
SHROOM3-204ENST00000473602 SMIM9A6NGZ8 99 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 ZNF705FA8MVS1 300 aaPredicted RBP9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 F6UB75 175 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 H0YIZ8 118 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 DEFB4AO15263 64 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 AMBPP02760 352 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 ZNF705DP0CH99 300 aaPredicted RBP9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 ZNF705BP0CI00 300 aaPredicted RBP9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 RBMY1A1P0DJD3 496 aaKnown RBP9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 RBMY1CP0DJD4 496 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 FGF7P21781 194 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 NHLH2Q02577 135 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 RBMY1FQ15415 496 aaKnown RBP9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 LGALS9CQ6DKI2 356 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 ZNF738Q8NE65 137 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 OR5C1Q8NGR4 320 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 LRRC20Q8TCA0 184 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 KCNIP2Q9NS61 270 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 PXMP4Q9Y6I8 212 aa9.36□□□□□ -0.91
SHROOM3-204ENST00000473602 C11orf94C9JXX5 98 aa9.35□□□□□ -0.91
SHROOM3-204ENST00000473602 MPC2O95563 127 aa9.35□□□□□ -0.91
SHROOM3-204ENST00000473602 CNN1P51911 297 aaKnown RBP9.35□□□□□ -0.91
SHROOM3-204ENST00000473602 NANOS2P60321 138 aaKnown RBP9.35□□□□□ -0.91
SHROOM3-204ENST00000473602 GUK1Q16774 197 aa9.35□□□□□ -0.91
SHROOM3-204ENST00000473602 AMTNQ6UX39 209 aa9.35□□□□□ -0.91
SHROOM3-204ENST00000473602 RNF182Q8N6D2 247 aa9.35□□□□□ -0.91
SHROOM3-204ENST00000473602 NPCDR1Q9BY65 106 aa9.35□□□□□ -0.91
SHROOM3-204ENST00000473602 SLC35B3Q9H1N7 401 aa9.35□□□□□ -0.91
SHROOM3-204ENST00000473602 ZNF331Q9NQX6 463 aaPredicted RBP9.35□□□□□ -0.91
SHROOM3-204ENST00000473602 GOLT1BQ9Y3E0 138 aa9.35□□□□□ -0.91
SHROOM3-204ENST00000473602 FAT2Q9NYQ8 4349 aa9.34□□□□□ -0.91
SHROOM3-204ENST00000473602 TMEM189A5PLL7 270 aa9.34□□□□□ -0.91
SHROOM3-204ENST00000473602 IGLC2P0DOY2 106 aa9.34□□□□□ -0.91
SHROOM3-204ENST00000473602 FXYD7P58549 80 aa9.34□□□□□ -0.91
SHROOM3-204ENST00000473602 PSG3Q16557 428 aa9.34□□□□□ -0.91
SHROOM3-204ENST00000473602 MORN5Q5VZ52 161 aa9.34□□□□□ -0.91
SHROOM3-204ENST00000473602 IGFL4Q6B9Z1 124 aa9.34□□□□□ -0.91
SHROOM3-204ENST00000473602 DNAH2Q9P225 4427 aa9.34□□□□□ -0.91
SHROOM3-204ENST00000473602 ZNF253O75346 499 aa9.33□□□□□ -0.92
SHROOM3-204ENST00000473602 OR11H7Q8NGC8 314 aa9.33□□□□□ -0.92
SHROOM3-204ENST00000473602 OR8A1Q8NGG7 326 aa9.33□□□□□ -0.92
SHROOM3-204ENST00000473602 THAP6Q8TBB0 222 aa9.33□□□□□ -0.92
SHROOM3-204ENST00000473602 IGF2BP2-AS1Q96M15 143 aa9.33□□□□□ -0.92
SHROOM3-204ENST00000473602 RNF126Q9BV68 326 aa9.33□□□□□ -0.92
SHROOM3-204ENST00000473602 WDR61Q9GZS3 305 aaKnown RBP9.33□□□□□ -0.92
SHROOM3-204ENST00000473602 RFNGQ9Y644 331 aa9.33□□□□□ -0.92
SHROOM3-204ENST00000473602 PKHD1P08F94 4074 aa9.33□□□□□ -0.92
SHROOM3-204ENST00000473602 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
SHROOM3-204ENST00000473602 C17orf112F2Z3M2 114 aa9.32□□□□□ -0.92
SHROOM3-204ENST00000473602 TCTAP57738 103 aa9.32□□□□□ -0.92
SHROOM3-204ENST00000473602 CLINT1Q14677 625 aa9.32□□□□□ -0.92
SHROOM3-204ENST00000473602 RGS21Q2M5E4 152 aa9.32□□□□□ -0.92
SHROOM3-204ENST00000473602 RPUSD4Q96CM3 377 aaKnown RBP9.32□□□□□ -0.92
SHROOM3-204ENST00000473602 ATP5SQ99766 215 aa9.32□□□□□ -0.92
SHROOM3-204ENST00000473602 TMEM14CQ9P0S9 112 aa9.32□□□□□ -0.92
SHROOM3-204ENST00000473602 HSPB11Q9Y547 144 aa9.32□□□□□ -0.92
SHROOM3-204ENST00000473602 ALG5Q9Y673 324 aa9.32□□□□□ -0.92
SHROOM3-204ENST00000473602 IGHV3OR16-12A0A075B7B8 117 aa9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 H3BQ15 152 aa9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 BOLA2-SMG1P6H3BVE0 249 aa9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 INSP01308 110 aa9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 HBE1P02100 147 aa9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 HLA-DMBP28068 263 aa9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 RPL12P30050 165 aaKnown RBP9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 HIST1H1AQ02539 215 aaPredicted RBP9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 C1orf158Q8N1D5 194 aa9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 C2CD4CQ8TF44 421 aa9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 SAT2Q96F10 170 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms