RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 H3BTX0 84 aa13.19□□□□□ -0.3
SNX4-204ENST00000473417 CA1P00915 261 aaPredicted RBP13.19□□□□□ -0.3
SNX4-204ENST00000473417 PMS2P11Q13670 270 aa13.19□□□□□ -0.3
SNX4-204ENST00000473417 GDF5OSQ5U4N7 250 aa13.19□□□□□ -0.3
SNX4-204ENST00000473417 FAM78BQ5VT40 261 aa13.19□□□□□ -0.3
SNX4-204ENST00000473417 RNF182Q8N6D2 247 aa13.19□□□□□ -0.3
SNX4-204ENST00000473417 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
SNX4-204ENST00000473417 PARD6GQ9BYG4 376 aaPredicted RBP13.19□□□□□ -0.3
SNX4-204ENST00000473417 TNFSF18Q9UNG2 199 aa13.19□□□□□ -0.3
SNX4-204ENST00000473417 RFNGQ9Y644 331 aa13.19□□□□□ -0.3
SNX4-204ENST00000473417 AGRNO00468 2067 aa13.19□□□□□ -0.3
SNX4-204ENST00000473417 BIRC6Q9NR09 4857 aa13.18□□□□□ -0.3
SNX4-204ENST00000473417 RNF222A6NCQ9 220 aa13.18□□□□□ -0.3
SNX4-204ENST00000473417 CXorf65A6NEN9 183 aa13.18□□□□□ -0.3
SNX4-204ENST00000473417 NUPR2A6NF83 97 aa13.18□□□□□ -0.3
SNX4-204ENST00000473417 F6UB75 175 aa13.18□□□□□ -0.3
SNX4-204ENST00000473417 H3BMM0 161 aa13.18□□□□□ -0.3
SNX4-204ENST00000473417 FFAR4Q5NUL3 377 aa13.18□□□□□ -0.3
SNX4-204ENST00000473417 SPATA31B1PQ5VZV4 182 aa13.18□□□□□ -0.3
SNX4-204ENST00000473417 SAV1Q9H4B6 383 aaPredicted RBP13.18□□□□□ -0.3
SNX4-204ENST00000473417 RPRMQ9NS64 109 aa13.18□□□□□ -0.3
SNX4-204ENST00000473417 H3BQ15 152 aa13.17□□□□□ -0.3
SNX4-204ENST00000473417 IGKV3-20P01619 116 aa13.17□□□□□ -0.3
SNX4-204ENST00000473417 HLA-DRB4P13762 266 aa13.17□□□□□ -0.3
SNX4-204ENST00000473417 HLA-DMBP28068 263 aa13.17□□□□□ -0.3
SNX4-204ENST00000473417 ZNF266Q14584 549 aa13.17□□□□□ -0.3
SNX4-204ENST00000473417 EBLN2Q6P2I7 272 aa13.17□□□□□ -0.3
SNX4-204ENST00000473417 FOXI2Q6ZQN5 318 aa13.17□□□□□ -0.3
SNX4-204ENST00000473417 MIR17HGQ75NE6 70 aa13.17□□□□□ -0.3
SNX4-204ENST00000473417 LINC00476Q8WZB0 136 aa13.17□□□□□ -0.3
SNX4-204ENST00000473417 HLA-DRB4X5D2U9 266 aa13.17□□□□□ -0.3
SNX4-204ENST00000473417 ARPC5O15511 151 aa13.16□□□□□ -0.3
SNX4-204ENST00000473417 IGLC2P0DOY2 106 aa13.16□□□□□ -0.3
SNX4-204ENST00000473417 SPP1P10451 314 aa13.16□□□□□ -0.3
SNX4-204ENST00000473417 MORN3Q6PF18 240 aaPredicted RBP13.16□□□□□ -0.3
SNX4-204ENST00000473417 LCN15Q6UWW0 184 aa13.16□□□□□ -0.3
SNX4-204ENST00000473417 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
SNX4-204ENST00000473417 GIG44P09565 113 aaPredicted RBP13.15□□□□□ -0.3
SNX4-204ENST00000473417 PRB4P10163 310 aaPredicted RBP13.15□□□□□ -0.3
SNX4-204ENST00000473417 CXCL2P19875 107 aa13.15□□□□□ -0.3
SNX4-204ENST00000473417 C4BPBP20851 252 aa13.15□□□□□ -0.3
SNX4-204ENST00000473417 Q6ZNX1 250 aa13.15□□□□□ -0.3
SNX4-204ENST00000473417 ZNF738Q8NE65 137 aa13.15□□□□□ -0.3
SNX4-204ENST00000473417 OR4B1Q8NGF8 309 aa13.15□□□□□ -0.3
SNX4-204ENST00000473417 SLC25A2Q9BXI2 301 aa13.15□□□□□ -0.3
SNX4-204ENST00000473417 HRH4Q9H3N8 390 aa13.15□□□□□ -0.3
SNX4-204ENST00000473417 ZNF331Q9NQX6 463 aaPredicted RBP13.15□□□□□ -0.3
SNX4-204ENST00000473417 ZNF586Q9NXT0 402 aa13.15□□□□□ -0.3
SNX4-204ENST00000473417 FUT9Q9Y231 359 aa13.15□□□□□ -0.3
SNX4-204ENST00000473417 A0A0J9YX75 114 aa13.14□□□□□ -0.31
SNX4-204ENST00000473417 SLC17A3O00476 420 aa13.14□□□□□ -0.31
SNX4-204ENST00000473417 PYYP10082 97 aa13.14□□□□□ -0.31
SNX4-204ENST00000473417 PSG3Q16557 428 aa13.14□□□□□ -0.31
SNX4-204ENST00000473417 CEMP1Q6PRD7 247 aaPredicted RBP13.14□□□□□ -0.31
SNX4-204ENST00000473417 FAM167A-AS1Q96KT0 104 aa13.14□□□□□ -0.31
SNX4-204ENST00000473417 RARRES2Q99969 163 aa13.14□□□□□ -0.31
SNX4-204ENST00000473417 SLC50A1Q9BRV3 221 aa13.14□□□□□ -0.31
SNX4-204ENST00000473417 MRPL32Q9BYC8 188 aaKnown RBP13.14□□□□□ -0.31
SNX4-204ENST00000473417 TMEM14CQ9P0S9 112 aa13.14□□□□□ -0.31
SNX4-204ENST00000473417 TIMM9Q9Y5J7 89 aa13.14□□□□□ -0.31
SNX4-204ENST00000473417 ZNF705DP0CH99 300 aaPredicted RBP13.13□□□□□ -0.31
SNX4-204ENST00000473417 ZNF705BP0CI00 300 aaPredicted RBP13.13□□□□□ -0.31
SNX4-204ENST00000473417 FXYD7P58549 80 aa13.13□□□□□ -0.31
SNX4-204ENST00000473417 GUK1Q16774 197 aa13.13□□□□□ -0.31
SNX4-204ENST00000473417 RPL7L1Q6DKI1 246 aaKnown RBP13.13□□□□□ -0.31
SNX4-204ENST00000473417 SAT2Q96F10 170 aaPredicted RBP13.13□□□□□ -0.31
SNX4-204ENST00000473417 MFFQ9GZY8 342 aa13.13□□□□□ -0.31
SNX4-204ENST00000473417 C11orf68Q9H3H3 251 aaKnown RBP13.13□□□□□ -0.31
SNX4-204ENST00000473417 CLEC5AQ9NY25 188 aa13.13□□□□□ -0.31
SNX4-204ENST00000473417 EIF3GO75821 320 aaKnown RBP eCLIP13.12□□□□□ -0.31
SNX4-204ENST00000473417 HIST1H1EP10412 219 aaKnown RBP13.12□□□□□ -0.31
SNX4-204ENST00000473417 ATP6V0CP27449 155 aa13.12□□□□□ -0.31
SNX4-204ENST00000473417 NUTF2P61970 127 aaKnown RBP13.12□□□□□ -0.31
SNX4-204ENST00000473417 ACOT6Q3I5F7 207 aaPredicted RBP13.12□□□□□ -0.31
SNX4-204ENST00000473417 BLNKQ8WV28 456 aa13.12□□□□□ -0.31
SNX4-204ENST00000473417 OR51M1Q9H341 326 aa13.12□□□□□ -0.31
SNX4-204ENST00000473417 XCL2Q9UBD3 114 aa13.12□□□□□ -0.31
SNX4-204ENST00000473417 TRBV19A0A075B6N1 114 aa13.11□□□□□ -0.31
SNX4-204ENST00000473417 BORCS7-ASMTA0A0B4J1R7 106 aa13.11□□□□□ -0.31
SNX4-204ENST00000473417 ZNF705FA8MVS1 300 aaPredicted RBP13.11□□□□□ -0.31
SNX4-204ENST00000473417 M6PRP20645 277 aa13.11□□□□□ -0.31
SNX4-204ENST00000473417 RAB2AP61019 212 aa13.11□□□□□ -0.31
SNX4-204ENST00000473417 RHOBP62745 196 aa13.11□□□□□ -0.31
SNX4-204ENST00000473417 TMEM41BQ5BJD5 291 aa13.11□□□□□ -0.31
SNX4-204ENST00000473417 OR11H4Q8NGC9 324 aa13.11□□□□□ -0.31
SNX4-204ENST00000473417 OR11H2Q8NH07 326 aa13.11□□□□□ -0.31
SNX4-204ENST00000473417 RPUSD4Q96CM3 377 aaKnown RBP13.11□□□□□ -0.31
SNX4-204ENST00000473417 KLK5Q9Y337 293 aaPredicted RBP13.11□□□□□ -0.31
SNX4-204ENST00000473417 hCG_2014768A0A024R1R8 64 aa13.1□□□□□ -0.31
SNX4-204ENST00000473417 OR10J4P0C629 311 aa13.1□□□□□ -0.31
SNX4-204ENST00000473417 CNN1P51911 297 aaKnown RBP13.1□□□□□ -0.31
SNX4-204ENST00000473417 PSG9Q00887 426 aa13.1□□□□□ -0.31
SNX4-204ENST00000473417 CLUHP3Q96NS8 147 aa13.1□□□□□ -0.31
SNX4-204ENST00000473417 PSMG3Q9BT73 122 aaPredicted RBP13.1□□□□□ -0.31
SNX4-204ENST00000473417 PAXXQ9BUH6 204 aa13.1□□□□□ -0.31
SNX4-204ENST00000473417 SLC35B3Q9H1N7 401 aa13.1□□□□□ -0.31
SNX4-204ENST00000473417 SH3BGRL3Q9H299 93 aa13.1□□□□□ -0.31
SNX4-204ENST00000473417 A0A1W2PPV4 95 aa13.09□□□□□ -0.31
SNX4-204ENST00000473417 OR7C2O60412 319 aa13.09□□□□□ -0.31
SNX4-204ENST00000473417 DUSP14O95147 198 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms