RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 MRPS12O15235 138 aaKnown RBP10.84□□□□□ -0.67
VTI1A-203ENST00000472892 INSP01308 110 aa10.84□□□□□ -0.67
VTI1A-203ENST00000472892 SLC38A11Q08AI6 406 aa10.84□□□□□ -0.67
VTI1A-203ENST00000472892 ZNF738Q8NE65 137 aa10.84□□□□□ -0.67
VTI1A-203ENST00000472892 OR8A1Q8NGG7 326 aa10.84□□□□□ -0.67
VTI1A-203ENST00000472892 ARV1Q9H2C2 271 aa10.84□□□□□ -0.67
VTI1A-203ENST00000472892 FAT2Q9NYQ8 4349 aa10.83□□□□□ -0.68
VTI1A-203ENST00000472892 ZNF705GA8MUZ8 300 aaPredicted RBP10.83□□□□□ -0.68
VTI1A-203ENST00000472892 GOSR2O14653 212 aa10.83□□□□□ -0.68
VTI1A-203ENST00000472892 PRM2P04554 102 aa10.83□□□□□ -0.68
VTI1A-203ENST00000472892 TSPOP30536 169 aa10.83□□□□□ -0.68
VTI1A-203ENST00000472892 DAD1P61803 113 aa10.83□□□□□ -0.68
VTI1A-203ENST00000472892 PSG3Q16557 428 aa10.83□□□□□ -0.68
VTI1A-203ENST00000472892 ZNF546Q86UE3 836 aa10.83□□□□□ -0.68
VTI1A-203ENST00000472892 C20orf85Q9H1P6 137 aa10.83□□□□□ -0.68
VTI1A-203ENST00000472892 DNAH17Q9UFH2 4485 aa10.83□□□□□ -0.68
VTI1A-203ENST00000472892 BOLA2-SMG1P6H3BVE0 249 aa10.82□□□□□ -0.68
VTI1A-203ENST00000472892 AGPAT2O15120 278 aa10.82□□□□□ -0.68
VTI1A-203ENST00000472892 LYRM1O43325 122 aa10.82□□□□□ -0.68
VTI1A-203ENST00000472892 TCRBP04435 133 aa10.82□□□□□ -0.68
VTI1A-203ENST00000472892 HTN3P15516 51 aa10.82□□□□□ -0.68
VTI1A-203ENST00000472892 LGALS9BQ3B8N2 356 aa10.82□□□□□ -0.68
VTI1A-203ENST00000472892 LINC00305Q7Z4B0 112 aa10.82□□□□□ -0.68
VTI1A-203ENST00000472892 BAP18Q8IXM2 172 aa10.82□□□□□ -0.68
VTI1A-203ENST00000472892 LRRC20Q8TCA0 184 aa10.82□□□□□ -0.68
VTI1A-203ENST00000472892 TRAV12-2A0A075B6T6 113 aa10.81□□□□□ -0.68
VTI1A-203ENST00000472892 LYRM9A8MSI8 78 aa10.81□□□□□ -0.68
VTI1A-203ENST00000472892 CXCL2P19875 107 aa10.81□□□□□ -0.68
VTI1A-203ENST00000472892 AZU1P20160 251 aa10.81□□□□□ -0.68
VTI1A-203ENST00000472892 HIST1H1AQ02539 215 aaPredicted RBP10.81□□□□□ -0.68
VTI1A-203ENST00000472892 RNF212Q495C1 297 aa10.81□□□□□ -0.68
VTI1A-203ENST00000472892 TMEM37Q8WXS4 190 aa10.81□□□□□ -0.68
VTI1A-203ENST00000472892 MGST2Q99735 147 aa10.81□□□□□ -0.68
VTI1A-203ENST00000472892 NDUFA13Q9P0J0 144 aa10.81□□□□□ -0.68
VTI1A-203ENST00000472892 KIAA1109Q2LD37 5005 aa10.81□□□□□ -0.68
VTI1A-203ENST00000472892 A0A1B0GVY2 172 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 PLAC8L1A1L4L8 177 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 L7N2F9 121 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 M0R2N4 97 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 CCSO14618 274 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 RTL8CO15255 209 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 RHOBP62745 196 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 VAMP2P63027 116 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 ZNF846Q147U1 533 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 TMEM88Q6PEY1 159 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 LCN15Q6UWW0 184 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 TMEM256Q8N2U0 113 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 ZNF431Q8TF32 576 aaPredicted RBP10.8□□□□□ -0.68
VTI1A-203ENST00000472892 RPUSD4Q96CM3 377 aaKnown RBP10.8□□□□□ -0.68
VTI1A-203ENST00000472892 LINC01587Q99440 93 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 C11orf1Q9H5F2 150 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 ZNF331Q9NQX6 463 aaPredicted RBP10.8□□□□□ -0.68
VTI1A-203ENST00000472892 PPP1R14DQ9NXH3 145 aa10.8□□□□□ -0.68
VTI1A-203ENST00000472892 TRAV6A0A075B6T7 132 aa10.79□□□□□ -0.68
VTI1A-203ENST00000472892 TAS2R60P59551 318 aa10.79□□□□□ -0.68
VTI1A-203ENST00000472892 Q6ZR54 194 aa10.79□□□□□ -0.68
VTI1A-203ENST00000472892 BPIFA4PQ86YQ2 179 aa10.79□□□□□ -0.68
VTI1A-203ENST00000472892 UBE2DNLQ8IWF7 75 aa10.79□□□□□ -0.68
VTI1A-203ENST00000472892 SLC50A1Q9BRV3 221 aa10.79□□□□□ -0.68
VTI1A-203ENST00000472892 LSM5Q9Y4Y9 91 aaKnown RBP10.79□□□□□ -0.68
VTI1A-203ENST00000472892 FAM25EA8MYX2 175 aa10.78□□□□□ -0.68
VTI1A-203ENST00000472892 COX7A2P2O60397 106 aa10.78□□□□□ -0.68
VTI1A-203ENST00000472892 SNRPCP09234 159 aaKnown RBP10.78□□□□□ -0.68
VTI1A-203ENST00000472892 CAMLGP49069 296 aa10.78□□□□□ -0.68
VTI1A-203ENST00000472892 BCAP31P51572 246 aa10.78□□□□□ -0.68
VTI1A-203ENST00000472892 MORN5Q5VZ52 161 aa10.78□□□□□ -0.68
VTI1A-203ENST00000472892 C10orf113Q5VZT2 155 aa10.78□□□□□ -0.68
VTI1A-203ENST00000472892 C12orf45Q8N5I9 185 aaPredicted RBP10.78□□□□□ -0.68
VTI1A-203ENST00000472892 C2orf50Q96LR7 162 aa10.78□□□□□ -0.68
VTI1A-203ENST00000472892 SEC22CQ9BRL7 303 aa10.78□□□□□ -0.68
VTI1A-203ENST00000472892 DNAJC4Q9NNZ3 241 aa10.78□□□□□ -0.68
VTI1A-203ENST00000472892 NUDT15Q9NV35 164 aa10.78□□□□□ -0.68
VTI1A-203ENST00000472892 C5orf51A6NDU8 294 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 FAM24AA6NFZ4 105 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 PRSS29PA6NIE9 313 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 CST7O76096 145 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 IGLC2P0DOY2 106 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 DEFB130BP0DP73 79 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 DEFB130AP0DP74 79 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 PRB4P10163 310 aaPredicted RBP10.77□□□□□ -0.69
VTI1A-203ENST00000472892 CDKN1BP46527 198 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 CAV2P51636 162 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 IL15RAQ13261 267 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 RAB31Q13636 194 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 OPCMLQ14982 345 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 FCN2Q15485 313 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 VWC2Q2TAL6 325 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 Q6ZRG5 221 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 C15orf53Q8NAA6 179 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 SAT2Q96F10 170 aaPredicted RBP10.77□□□□□ -0.69
VTI1A-203ENST00000472892 KRTAP17-1Q9BYP8 105 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 WDR83OSQ9Y284 106 aa10.77□□□□□ -0.69
VTI1A-203ENST00000472892 IGLV2-18A0A075B6J9 118 aa10.76□□□□□ -0.69
VTI1A-203ENST00000472892 H3BQ15 152 aa10.76□□□□□ -0.69
VTI1A-203ENST00000472892 SLC17A3O00476 420 aa10.76□□□□□ -0.69
VTI1A-203ENST00000472892 ZNF493Q6ZR52 646 aa10.76□□□□□ -0.69
VTI1A-203ENST00000472892 NRARPQ7Z6K4 114 aa10.76□□□□□ -0.69
VTI1A-203ENST00000472892 C16orf74Q96GX8 76 aa10.76□□□□□ -0.69
VTI1A-203ENST00000472892 C20orf144Q9BQM9 153 aa10.76□□□□□ -0.69
VTI1A-203ENST00000472892 CCDC32Q9BV29 185 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 249.6 ms