RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 RHOBP62745 196 aa10.42□□□□□ -0.74
BRCA1-211ENST00000472490 ACOT6Q3I5F7 207 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-211ENST00000472490 GCSAMLQ5JQS6 135 aa10.42□□□□□ -0.74
BRCA1-211ENST00000472490 ZNF738Q8NE65 137 aa10.42□□□□□ -0.74
BRCA1-211ENST00000472490 OR4B1Q8NGF8 309 aa10.42□□□□□ -0.74
BRCA1-211ENST00000472490 C17orf77Q96MU5 243 aa10.42□□□□□ -0.74
BRCA1-211ENST00000472490 WFDC1Q9HC57 220 aa10.42□□□□□ -0.74
BRCA1-211ENST00000472490 ZNF331Q9NQX6 463 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-211ENST00000472490 FUT9Q9Y231 359 aa10.42□□□□□ -0.74
BRCA1-211ENST00000472490 TRAV8-2A0A0B4J237 113 aa10.41□□□□□ -0.74
BRCA1-211ENST00000472490 TRAV5A0A0B4J249 113 aa10.41□□□□□ -0.74
BRCA1-211ENST00000472490 A0A0J9YX75 114 aa10.41□□□□□ -0.74
BRCA1-211ENST00000472490 TAAR5O14804 337 aa10.41□□□□□ -0.74
BRCA1-211ENST00000472490 HIST1H1EP10412 219 aaKnown RBP10.41□□□□□ -0.74
BRCA1-211ENST00000472490 TAS2R45P59539 299 aa10.41□□□□□ -0.74
BRCA1-211ENST00000472490 RARRES2Q99969 163 aa10.41□□□□□ -0.74
BRCA1-211ENST00000472490 A0A1W2PPV4 95 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 RNF222A6NCQ9 220 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 ARPC5O15511 151 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 M6PRP20645 277 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 SERF2P84101 59 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 PSG9Q00887 426 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 PDE6HQ13956 83 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 PSG3Q16557 428 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 GDF5OSQ5U4N7 250 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 RNF182Q8N6D2 247 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 IL17DQ8TAD2 202 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 GNPNAT1Q96EK6 184 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-211ENST00000472490 C20orf173Q96LM9 149 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 PSMG3Q9BT73 122 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-211ENST00000472490 MFFQ9GZY8 342 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 OR51M1Q9H341 326 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 EDA2RQ9HAV5 297 aa10.4□□□□□ -0.74
BRCA1-211ENST00000472490 TRBV19A0A075B6N1 114 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 G3V3Q6 166 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 H3BQ15 152 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 JTBO76095 146 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 IGKV3-20P01619 116 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 MBP02144 154 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 KHDC3LQ587J8 217 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 IGFL4Q6B9Z1 124 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 MIR17HGQ75NE6 70 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 HSD17B11Q8NBQ5 300 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 SAT2Q96F10 170 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-211ENST00000472490 SLC25A2Q9BXI2 301 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 AAMDCQ9H7C9 122 aa10.39□□□□□ -0.75
BRCA1-211ENST00000472490 F6UB75 175 aa10.38□□□□□ -0.75
BRCA1-211ENST00000472490 OR7C2O60412 319 aa10.38□□□□□ -0.75
BRCA1-211ENST00000472490 AMBPP02760 352 aa10.38□□□□□ -0.75
BRCA1-211ENST00000472490 SNRPCP09234 159 aaKnown RBP10.38□□□□□ -0.75
BRCA1-211ENST00000472490 ZNF345Q14585 488 aa10.38□□□□□ -0.75
BRCA1-211ENST00000472490 OR2G3Q8NGZ4 309 aa10.38□□□□□ -0.75
BRCA1-211ENST00000472490 OR11H2Q8NH07 326 aa10.38□□□□□ -0.75
BRCA1-211ENST00000472490 MUC7Q8TAX7 377 aa10.38□□□□□ -0.75
BRCA1-211ENST00000472490 RPUSD4Q96CM3 377 aaKnown RBP10.38□□□□□ -0.75
BRCA1-211ENST00000472490 PAXXQ9BUH6 204 aa10.38□□□□□ -0.75
BRCA1-211ENST00000472490 PPP1R14DQ9NXH3 145 aa10.38□□□□□ -0.75
BRCA1-211ENST00000472490 ZNF586Q9NXT0 402 aa10.38□□□□□ -0.75
BRCA1-211ENST00000472490 PRELID1Q9Y255 219 aa10.38□□□□□ -0.75
BRCA1-211ENST00000472490 TGP01266 2768 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 HMSDA8MTL9 139 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 C3orf84H3BNL1 204 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 SLC17A3O00476 420 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 GIG44P09565 113 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-211ENST00000472490 NBEAP1P0C6P0 100 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 PYYP10082 97 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 C4BPBP20851 252 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 ATP6V0CP27449 155 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 CNN1P51911 297 aaKnown RBP10.37□□□□□ -0.75
BRCA1-211ENST00000472490 DEFB1P60022 68 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 Q6ZNX1 250 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 OR8A1Q8NGG7 326 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 OR10G4Q8NGN3 311 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 OR10G9Q8NGN4 311 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 OR10G7Q8NGN6 311 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 OR10J6PQ8NGY7 276 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 RNF141Q8WVD5 230 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 MRPL53Q96EL3 112 aaKnown RBP10.37□□□□□ -0.75
BRCA1-211ENST00000472490 FAM167A-AS1Q96KT0 104 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 XCL2Q9UBD3 114 aa10.37□□□□□ -0.75
BRCA1-211ENST00000472490 A0A0D9SG52 128 aa10.36□□□□□ -0.75
BRCA1-211ENST00000472490 A8MTW9 85 aa10.36□□□□□ -0.75
BRCA1-211ENST00000472490 SMLR1H3BR10 107 aa10.36□□□□□ -0.75
BRCA1-211ENST00000472490 H3BTX0 84 aa10.36□□□□□ -0.75
BRCA1-211ENST00000472490 HIST1H1AQ02539 215 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-211ENST00000472490 RPL7L1Q6DKI1 246 aaKnown RBP10.36□□□□□ -0.75
BRCA1-211ENST00000472490 PQLC2Q6ZP29 291 aa10.36□□□□□ -0.75
BRCA1-211ENST00000472490 BLNKQ8WV28 456 aa10.36□□□□□ -0.75
BRCA1-211ENST00000472490 MIFP14174 115 aa10.35□□□□□ -0.75
BRCA1-211ENST00000472490 HLA-DMBP28068 263 aa10.35□□□□□ -0.75
BRCA1-211ENST00000472490 UBE2L3P68036 154 aaKnown RBP10.35□□□□□ -0.75
BRCA1-211ENST00000472490 LYPD1Q8N2G4 141 aa10.35□□□□□ -0.75
BRCA1-211ENST00000472490 CSNK1G2-AS1Q8NCQ2 148 aa10.35□□□□□ -0.75
BRCA1-211ENST00000472490 ARPC5LQ9BPX5 153 aa10.35□□□□□ -0.75
BRCA1-211ENST00000472490 A0A0J9YWU9 116 aa10.34□□□□□ -0.75
BRCA1-211ENST00000472490 ZNF705EA8MWA4 302 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-211ENST00000472490 OR10J4P0C629 311 aa10.34□□□□□ -0.75
BRCA1-211ENST00000472490 CDC34P49427 236 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-211ENST00000472490 RAB2AP61019 212 aa10.34□□□□□ -0.75
BRCA1-211ENST00000472490 FAM122CQ6P4D5 195 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms