RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 HLA-DQA1P01909 254 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 MT-ND6P03923 174 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 ESDP10768 282 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 OR4F17Q8NGA8 305 aa11.73□□□□□ -0.53
UBXN11-213ENST00000472155 A8MWP6 167 aa11.72□□□□□ -0.53
UBXN11-213ENST00000472155 M0QZ24 198 aa11.72□□□□□ -0.53
UBXN11-213ENST00000472155 CRIP1P50238 77 aa11.72□□□□□ -0.53
UBXN11-213ENST00000472155 TPPP2P59282 170 aa11.72□□□□□ -0.53
UBXN11-213ENST00000472155 C18orf32Q8TCD1 76 aa11.72□□□□□ -0.53
UBXN11-213ENST00000472155 C8orf49Q96NF6 230 aa11.72□□□□□ -0.53
UBXN11-213ENST00000472155 TBL2Q9Y4P3 447 aaKnown RBP11.72□□□□□ -0.53
UBXN11-213ENST00000472155 IGHV4-61A0A0C4DH41 118 aa11.72□□□□□ -0.53
UBXN11-213ENST00000472155 ZNF705FA8MVS1 300 aaPredicted RBP11.72□□□□□ -0.53
UBXN11-213ENST00000472155 GPX1P07203 203 aa11.72□□□□□ -0.53
UBXN11-213ENST00000472155 ZNF705DP0CH99 300 aaPredicted RBP11.72□□□□□ -0.53
UBXN11-213ENST00000472155 ZNF705BP0CI00 300 aaPredicted RBP11.72□□□□□ -0.53
UBXN11-213ENST00000472155 SFTPCP11686 197 aa11.72□□□□□ -0.53
UBXN11-213ENST00000472155 NRGNQ92686 78 aa11.72□□□□□ -0.53
UBXN11-213ENST00000472155 IGHV3OR16-13A0A075B7E8 117 aa11.71□□□□□ -0.53
UBXN11-213ENST00000472155 IGHV3-74A0A0B4J1X5 117 aa11.71□□□□□ -0.53
UBXN11-213ENST00000472155 IGHV3-66A0A0C4DH42 116 aa11.71□□□□□ -0.53
UBXN11-213ENST00000472155 A0A1B0GXF2 115 aa11.71□□□□□ -0.53
UBXN11-213ENST00000472155 FAM106CPP0CH98 169 aa11.71□□□□□ -0.53
UBXN11-213ENST00000472155 GPR183P32249 361 aa11.71□□□□□ -0.53
UBXN11-213ENST00000472155 UNQ5815/PRO19632Q6UWF5 114 aa11.71□□□□□ -0.53
UBXN11-213ENST00000472155 ABCA12Q86UK0 2595 aa11.71□□□□□ -0.54
UBXN11-213ENST00000472155 FOXA3P55318 350 aaPredicted RBP11.71□□□□□ -0.54
UBXN11-213ENST00000472155 C15orf32Q32M92 178 aa11.71□□□□□ -0.54
UBXN11-213ENST00000472155 TOMM20LQ6UXN7 152 aa11.71□□□□□ -0.54
UBXN11-213ENST00000472155 C1RLQ9NZP8 487 aa11.71□□□□□ -0.54
UBXN11-213ENST00000472155 SMAD5-AS1Q9Y6J3 95 aa11.71□□□□□ -0.54
UBXN11-213ENST00000472155 NPFFO15130 113 aa11.7□□□□□ -0.54
UBXN11-213ENST00000472155 COL8A1P27658 744 aa11.7□□□□□ -0.54
UBXN11-213ENST00000472155 AMTP48728 403 aa11.7□□□□□ -0.54
UBXN11-213ENST00000472155 VN1R17PQ8TDU5 208 aa11.7□□□□□ -0.54
UBXN11-213ENST00000472155 EPG5Q9HCE0 2579 aa11.7□□□□□ -0.54
UBXN11-213ENST00000472155 IGKV2-40A0A087WW87 121 aaPredicted RBP11.7□□□□□ -0.54
UBXN11-213ENST00000472155 OOSP1A8MZH6 123 aa11.7□□□□□ -0.54
UBXN11-213ENST00000472155 IGKV2D-40P01614 121 aaPredicted RBP11.7□□□□□ -0.54
UBXN11-213ENST00000472155 BRS3P32247 399 aa11.7□□□□□ -0.54
UBXN11-213ENST00000472155 WIPF2Q8TF74 440 aaPredicted RBP11.7□□□□□ -0.54
UBXN11-213ENST00000472155 PTPN13Q12923 2485 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 DIRC3C9JPN6 131 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 NTF3P20783 257 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 KRTDAPP60985 99 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 ZNF124Q15973 351 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 NRN1Q9NPD7 142 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 PSG8Q9UQ74 426 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 IGHV3-49A0A0A0MS15 119 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 CLEC3BP05452 202 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 PAFAH1B2P68402 229 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 RHOGP84095 191 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 OR10J3Q5JRS4 329 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 NIT1Q86X76 327 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 Q8N976 141 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 DAZAP1Q96EP5 407 aaKnown RBP11.69□□□□□ -0.54
UBXN11-213ENST00000472155 KCNS1Q96KK3 526 aa11.69□□□□□ -0.54
UBXN11-213ENST00000472155 ANKRD17O75179 2603 aaKnown RBP11.69□□□□□ -0.54
UBXN11-213ENST00000472155 SIGLECL1Q8N7X8 197 aa11.68□□□□□ -0.54
UBXN11-213ENST00000472155 URB1-AS1Q96HZ7 61 aa11.68□□□□□ -0.54
UBXN11-213ENST00000472155 ALKBH7Q9BT30 221 aaPredicted RBP11.68□□□□□ -0.54
UBXN11-213ENST00000472155 ZNF492Q9P255 531 aa11.68□□□□□ -0.54
UBXN11-213ENST00000472155 IGHG4P01861 327 aa11.68□□□□□ -0.54
UBXN11-213ENST00000472155 PMCHL1Q16048 86 aa11.68□□□□□ -0.54
UBXN11-213ENST00000472155 REC114Q7Z4M0 266 aa11.68□□□□□ -0.54
UBXN11-213ENST00000472155 Q8TAT8 98 aa11.68□□□□□ -0.54
UBXN11-213ENST00000472155 MXRA5Q9NR99 2828 aa11.68□□□□□ -0.54
UBXN11-213ENST00000472155 TRAV30A0A087WSZ9 112 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 A8MWL6 223 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 NPIPB6E9PJ23 425 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 ZNF207O43670 478 aaKnown RBP11.67□□□□□ -0.54
UBXN11-213ENST00000472155 IGHV4-38-2P0DP08 117 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 PSG3Q16557 428 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 CCDC140Q96MF4 163 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 TMSB15BA0A087X1C1 80 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 TRAV40A0A0B4J280 105 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 MUC21A0A0G2JKD1 596 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 MUC21A0A140T8X8 626 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 ZNF324O75467 553 aaPredicted RBP11.67□□□□□ -0.54
UBXN11-213ENST00000472155 APOHP02749 345 aaPredicted RBP11.67□□□□□ -0.54
UBXN11-213ENST00000472155 PRB1P04280 392 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 MUC21Q5SSG8 566 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 CLEC19AQ6UXS0 136 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 PIFOQ8TCI5 191 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 SMIM12Q96EX1 92 aa11.67□□□□□ -0.54
UBXN11-213ENST00000472155 NBPF19A0A087WUL8 3843 aa11.66□□□□□ -0.54
UBXN11-213ENST00000472155 HBBP68871 147 aa11.66□□□□□ -0.54
UBXN11-213ENST00000472155 ZNF502Q8TBZ5 544 aa11.66□□□□□ -0.54
UBXN11-213ENST00000472155 ZNF48Q96MX3 618 aaPredicted RBP11.66□□□□□ -0.54
UBXN11-213ENST00000472155 TPPP3Q9BW30 176 aa11.66□□□□□ -0.54
UBXN11-213ENST00000472155 THYN1Q9P016 225 aa11.66□□□□□ -0.54
UBXN11-213ENST00000472155 PAM16Q9Y3D7 125 aa11.66□□□□□ -0.54
UBXN11-213ENST00000472155 IGHV4-30-2A0A087WSY4 118 aa11.66□□□□□ -0.54
UBXN11-213ENST00000472155 ARMS2P0C7Q2 107 aa11.66□□□□□ -0.54
UBXN11-213ENST00000472155 TMEM75Q8N9X5 138 aa11.66□□□□□ -0.54
UBXN11-213ENST00000472155 FAM110DQ8TAY7 271 aaPredicted RBP11.66□□□□□ -0.54
UBXN11-213ENST00000472155 ZNF469Q96JG9 3925 aaPredicted RBP11.66□□□□□ -0.54
UBXN11-213ENST00000472155 ZNF138P52744 262 aa11.65□□□□□ -0.54
UBXN11-213ENST00000472155 COX19Q49B96 90 aa11.65□□□□□ -0.54
UBXN11-213ENST00000472155 LCN12Q6JVE5 192 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms