RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 TRAV27A0A087WT01 109 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 LOC107984156A0A0G2JMH3 177 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 TMEM256-PLSCR3K7ERE1 68 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 OR10J4P0C629 311 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 UBE2BP63146 152 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 MYL5Q02045 173 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 CCDC122Q5T0U0 273 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 S100A7AQ86SG5 101 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 ARL17AQ8IVW1 177 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 OR5D16Q8NGK9 328 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 MALSU1Q96EH3 234 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 NKIRAS1Q9NYS0 192 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 CTTNBP2Q8WZ74 1663 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 RTL1A6NKG5 1358 aa-0.98□□□□□ -2.57
PRPF40A-207ENST00000471701 TRAV4A0A0B4J268 109 aa-0.99□□□□□ -2.57
PRPF40A-207ENST00000471701 M0QX08 132 aa-0.99□□□□□ -2.57
PRPF40A-207ENST00000471701 PDE6GP18545 87 aa-0.99□□□□□ -2.57
PRPF40A-207ENST00000471701 RAB5CP51148 216 aa-0.99□□□□□ -2.57
PRPF40A-207ENST00000471701 VBP1P61758 197 aa-0.99□□□□□ -2.57
PRPF40A-207ENST00000471701 BCL2L15Q5TBC7 163 aa-0.99□□□□□ -2.57
PRPF40A-207ENST00000471701 HYLS1Q96M11 299 aa-0.99□□□□□ -2.57
PRPF40A-207ENST00000471701 NPCDR1Q9BY65 106 aa-0.99□□□□□ -2.57
PRPF40A-207ENST00000471701 FMN1Q68DA7 1419 aa-0.99□□□□□ -2.57
PRPF40A-207ENST00000471701 ABCA4P78363 2273 aa-1□□□□□ -2.57
PRPF40A-207ENST00000471701 F8P00451 2351 aa-1□□□□□ -2.57
PRPF40A-207ENST00000471701 PRORSD1PA6NEY8 169 aa-1□□□□□ -2.57
PRPF40A-207ENST00000471701 TAX1BP3O14907 124 aa-1□□□□□ -2.57
PRPF40A-207ENST00000471701 EIF5AL1Q6IS14 154 aaKnown RBP-1□□□□□ -2.57
PRPF40A-207ENST00000471701 LINC00299Q6ZSB3 139 aa-1□□□□□ -2.57
PRPF40A-207ENST00000471701 VMO1Q7Z5L0 202 aa-1□□□□□ -2.57
PRPF40A-207ENST00000471701 C10orf111Q8N326 155 aa-1□□□□□ -2.57
PRPF40A-207ENST00000471701 CHCHD1Q96BP2 118 aaKnown RBP-1□□□□□ -2.57
PRPF40A-207ENST00000471701 CHD9Q3L8U1 2897 aa-1□□□□□ -2.57
PRPF40A-207ENST00000471701 CEP164Q9UPV0 1460 aa-1□□□□□ -2.57
PRPF40A-207ENST00000471701 PDE6DO43924 150 aa-1.01□□□□□ -2.57
PRPF40A-207ENST00000471701 HLA-EP13747 358 aa-1.01□□□□□ -2.57
PRPF40A-207ENST00000471701 DYNLT3P51808 116 aa-1.01□□□□□ -2.57
PRPF40A-207ENST00000471701 LRRC18Q8N456 261 aa-1.01□□□□□ -2.57
PRPF40A-207ENST00000471701 JMJD1CQ15652 2540 aa-1.01□□□□□ -2.57
PRPF40A-207ENST00000471701 A0A096LPI6 279 aa-1.02□□□□□ -2.57
PRPF40A-207ENST00000471701 hDV103S1A0JD37 113 aa-1.02□□□□□ -2.57
PRPF40A-207ENST00000471701 CST8O60676 142 aa-1.02□□□□□ -2.57
PRPF40A-207ENST00000471701 IGHV3-33P01772 117 aa-1.02□□□□□ -2.57
PRPF40A-207ENST00000471701 ATP5G3P48201 142 aa-1.02□□□□□ -2.57
PRPF40A-207ENST00000471701 MIR22HGQ0VDD5 57 aa-1.02□□□□□ -2.57
PRPF40A-207ENST00000471701 FOXI2Q6ZQN5 318 aa-1.02□□□□□ -2.57
PRPF40A-207ENST00000471701 PRELID3BQ9Y3B1 194 aa-1.02□□□□□ -2.57
PRPF40A-207ENST00000471701 A0A0J9YY99 117 aa-1.03□□□□□ -2.57
PRPF40A-207ENST00000471701 A0A1W2PRS3 328 aa-1.03□□□□□ -2.57
PRPF40A-207ENST00000471701 TPM3P06753 285 aa-1.03□□□□□ -2.57
PRPF40A-207ENST00000471701 MAGOHP61326 146 aaKnown RBP-1.03□□□□□ -2.57
PRPF40A-207ENST00000471701 ZNF56Q15929 161 aa-1.03□□□□□ -2.57
PRPF40A-207ENST00000471701 XAF1Q6GPH4 301 aa-1.03□□□□□ -2.57
PRPF40A-207ENST00000471701 OR4K15Q8NH41 348 aa-1.03□□□□□ -2.57
PRPF40A-207ENST00000471701 FAM213BQ8TBF2 198 aa-1.03□□□□□ -2.57
PRPF40A-207ENST00000471701 LINC00208Q96KT6 92 aa-1.03□□□□□ -2.57
PRPF40A-207ENST00000471701 MYCBP2O75592 4640 aa-1.03□□□□□ -2.57
PRPF40A-207ENST00000471701 LPAP08519 4548 aa-1.04□□□□□ -2.58
PRPF40A-207ENST00000471701 M0R036 132 aa-1.04□□□□□ -2.58
PRPF40A-207ENST00000471701 OMPP47874 163 aa-1.04□□□□□ -2.58
PRPF40A-207ENST00000471701 ZCCHC23Q6ZST2 131 aa-1.04□□□□□ -2.58
PRPF40A-207ENST00000471701 TRIM4Q9C037 500 aa-1.04□□□□□ -2.58
PRPF40A-207ENST00000471701 POPDC3Q9HBV1 291 aa-1.04□□□□□ -2.58
PRPF40A-207ENST00000471701 CCDC144AA2RUR9 1427 aa-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 NUP210LQ5VU65 1888 aa-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 AHCTF1Q8WYP5 2266 aa-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 TRBV19A0A075B6N1 114 aa-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 DUXBA0A1W2PPF3 345 aa-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 C10orf142B7Z368 130 aa-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 GGCTO75223 188 aaKnown RBP-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 SULT1C4O75897 302 aa-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 ERP29P30040 261 aaKnown RBP-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 PARD6GQ9BYG4 376 aaPredicted RBP-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 FRMPD1Q5SYB0 1578 aa-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 HUWE1Q7Z6Z7 4374 aaKnown RBP-1.05□□□□□ -2.58
PRPF40A-207ENST00000471701 DOCK4Q8N1I0 1966 aa-1.06□□□□□ -2.58
PRPF40A-207ENST00000471701 FAM159BA6NKW6 160 aa-1.06□□□□□ -2.58
PRPF40A-207ENST00000471701 A6NN06 94 aa-1.06□□□□□ -2.58
PRPF40A-207ENST00000471701 HAND1O96004 215 aa-1.06□□□□□ -2.58
PRPF40A-207ENST00000471701 EVI2AP22794 236 aa-1.06□□□□□ -2.58
PRPF40A-207ENST00000471701 TPM4P67936 248 aa-1.06□□□□□ -2.58
PRPF40A-207ENST00000471701 IMPG1Q17R60 797 aa-1.06□□□□□ -2.58
PRPF40A-207ENST00000471701 PPTC7Q8NI37 304 aa-1.06□□□□□ -2.58
PRPF40A-207ENST00000471701 ZHX1-C8orf76Q96EF9 292 aa-1.06□□□□□ -2.58
PRPF40A-207ENST00000471701 TEX37Q96LM6 180 aa-1.06□□□□□ -2.58
PRPF40A-207ENST00000471701 N4BP2Q86UW6 1770 aaPredicted RBP-1.06□□□□□ -2.58
PRPF40A-207ENST00000471701 ZANQ9Y493 2812 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 TRPM1Q7Z4N2 1603 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 K7ERJ3 54 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 LYPLA2O95372 231 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 CRHP06850 196 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 HIST1H3AP68431 136 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 H3F3AP84243 136 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 AESQ08117 197 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 KLRD1Q13241 179 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 EDDM3AQ14507 147 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 TRAPPC5Q8IUR0 188 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 ARL5BQ96KC2 179 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 NCOR1O75376 2440 aa-1.07□□□□□ -2.58
PRPF40A-207ENST00000471701 IDO1P14902 403 aa-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms