RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 NPBQ8NG41 125 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 OR4A5Q8NH83 315 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 RNASE11Q8TAA1 199 aaKnown RBP3.39□□□□□ -1.87
CCDC39-202ENST00000471307 C17orf50Q8WW18 174 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 SRSF12Q8WXF0 261 aaKnown RBP3.39□□□□□ -1.87
CCDC39-202ENST00000471307 GPR146Q96CH1 333 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 OR10C1Q96KK4 312 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 PDCD10Q9BUL8 212 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 FKBP11Q9NYL4 201 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 BET1LQ9NYM9 111 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 GSKIPQ9P0R6 139 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 HIVEP1P15822 2718 aa3.39□□□□□ -1.87
CCDC39-202ENST00000471307 SONP18583 2426 aaKnown RBP3.39□□□□□ -1.87
CCDC39-202ENST00000471307 CSMD1Q96PZ7 3565 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 IGHV3-72A0A0B4J1Y9 119 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 UPK2O00526 184 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 SIVA1O15304 175 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 PITX3O75364 302 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 MED6O75586 246 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 SIX6O95475 246 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 IGKV1D-33P01593 117 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 IGKV1-33P01594 117 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 IGLV2-23P01705 113 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 PET100P0DJ07 73 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 PSMB6P28072 239 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 MAS1LP35410 378 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 SRP14P37108 136 aaKnown RBP3.38□□□□□ -1.87
CCDC39-202ENST00000471307 HSPE1P61604 102 aaKnown RBP3.38□□□□□ -1.87
CCDC39-202ENST00000471307 HES1Q14469 280 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 PSG5Q15238 335 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 LRRC75BQ2VPJ9 315 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 NSUN5P1Q3KNT7 163 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 ZNF429Q86V71 674 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 PPP1R27Q86WC6 154 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 PUSL1Q8N0Z8 303 aaKnown RBP3.38□□□□□ -1.87
CCDC39-202ENST00000471307 Q8N6K4 173 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 OR5B3Q8NH48 314 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 OR52E5Q8NH55 327 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 OR1S1Q8NH92 325 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 TMEM167AQ8TBQ9 72 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 PIFOQ8TCI5 191 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 MARC2Q969Z3 335 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 SLC35E1Q96K37 410 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 HINT2Q9BX68 163 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 TMEM14BQ9NUH8 114 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 PRNDQ9UKY0 176 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 ZNF257Q9Y2Q1 563 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 SIGLEC9Q9Y336 463 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 PLXNB1O43157 2135 aa3.38□□□□□ -1.87
CCDC39-202ENST00000471307 ZNF469Q96JG9 3925 aaPredicted RBP3.37□□□□□ -1.87
CCDC39-202ENST00000471307 A0A0G2JRQ6 117 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 TEX50A0A1B0GTY4 177 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 A6NDX4 124 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 NCBP2LA6PVI3 153 aaKnown RBP3.37□□□□□ -1.87
CCDC39-202ENST00000471307 HMSDA8MTL9 139 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 ZNF705EA8MWA4 302 aaPredicted RBP3.37□□□□□ -1.87
CCDC39-202ENST00000471307 M0QZK8 103 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 MRPS12O15235 138 aaKnown RBP3.37□□□□□ -1.87
CCDC39-202ENST00000471307 FGF16O43320 207 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 SYNGR2O43760 224 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 EIF3GO75821 320 aaKnown RBP eCLIP3.37□□□□□ -1.87
CCDC39-202ENST00000471307 NDUFA3O95167 84 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 MPC2O95563 127 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 IFNA17P01571 189 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 HBE1P02100 147 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 C1QBP02746 253 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 SAA1P0DJI8 122 aaPredicted RBP3.37□□□□□ -1.87
CCDC39-202ENST00000471307 SLC25A4P12235 298 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 PVALBP20472 110 aaPredicted RBP3.37□□□□□ -1.87
CCDC39-202ENST00000471307 CD24P25063 80 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 TAS2R30P59541 319 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 SPCS3P61009 180 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 SELENOTP62341 195 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 TNFRSF9Q07011 255 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 MMDQ15546 238 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 PRSS8Q16651 343 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 C5orf64Q2M2E5 130 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 DEFB112Q30KQ8 113 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 ZNF546Q86UE3 836 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 VKORC1L1Q8N0U8 176 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 OR1L8Q8NGR8 309 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 OR2T35Q8NGX2 323 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 PPP1R1CQ8WVI7 109 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 HYLS1Q96M11 299 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 CIB3Q96Q77 187 aaPredicted RBP3.37□□□□□ -1.87
CCDC39-202ENST00000471307 RNF126Q9BV68 326 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 COMMD5Q9GZQ3 224 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 RETNQ9HD89 108 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 METTL1Q9UBP6 276 aaKnown RBP3.37□□□□□ -1.87
CCDC39-202ENST00000471307 OR51B2Q9Y5P1 312 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 MTORP42345 2549 aa3.37□□□□□ -1.87
CCDC39-202ENST00000471307 TET2Q6N021 2002 aaPredicted RBP3.36□□□□□ -1.87
CCDC39-202ENST00000471307 TRAV3A0A0B4J244 114 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 CEBPZOSA8MTT3 80 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 INS-IGF2F8WCM5 200 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 H3BUX3 64 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 K7EPK0 472 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 DEDDO75618 318 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 CNIH1O95406 144 aa3.36□□□□□ -1.87
CCDC39-202ENST00000471307 HLA-DRB1P01911 266 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms