RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 FAM90A1Q86YD7 464 aa11.55□□□□□ -0.56
HDAC7-219ENST00000470668 PCDH15Q96QU1 1955 aa11.55□□□□□ -0.56
HDAC7-219ENST00000470668 C9orf106Q8NAJ2 232 aa11.55□□□□□ -0.56
HDAC7-219ENST00000470668 SSC4DQ8WTU2 575 aa11.55□□□□□ -0.56
HDAC7-219ENST00000470668 MRAP2Q96G30 205 aa11.55□□□□□ -0.56
HDAC7-219ENST00000470668 PLXNA2O75051 1894 aa11.55□□□□□ -0.56
HDAC7-219ENST00000470668 TP73-AS1Q9UF72 201 aa11.55□□□□□ -0.56
HDAC7-219ENST00000470668 TOMM40O96008 361 aa11.54□□□□□ -0.56
HDAC7-219ENST00000470668 TMEM155Q4W5P6 130 aa11.54□□□□□ -0.56
HDAC7-219ENST00000470668 DTX1Q86Y01 620 aa11.54□□□□□ -0.56
HDAC7-219ENST00000470668 C5orf42Q9H799 3197 aa11.54□□□□□ -0.56
HDAC7-219ENST00000470668 PLXNB3Q9ULL4 1909 aa11.54□□□□□ -0.56
HDAC7-219ENST00000470668 TAX1BP3O14907 124 aa11.54□□□□□ -0.56
HDAC7-219ENST00000470668 WNT2P09544 360 aa11.54□□□□□ -0.56
HDAC7-219ENST00000470668 B3GALT5-AS1P59052 145 aa11.54□□□□□ -0.56
HDAC7-219ENST00000470668 RNASE1P07998 156 aaKnown RBP11.54□□□□□ -0.56
HDAC7-219ENST00000470668 MEIG1Q5JSS6 88 aa11.54□□□□□ -0.56
HDAC7-219ENST00000470668 SH2D6Q7Z4S9 175 aa11.54□□□□□ -0.56
HDAC7-219ENST00000470668 CENPVQ7Z7K6 275 aaPredicted RBP11.54□□□□□ -0.56
HDAC7-219ENST00000470668 YPEL4Q96NS1 127 aa11.54□□□□□ -0.56
HDAC7-219ENST00000470668 PSMB11A5LHX3 300 aa11.53□□□□□ -0.56
HDAC7-219ENST00000470668 PF4V1P10720 104 aa11.53□□□□□ -0.56
HDAC7-219ENST00000470668 Q86TA4 180 aa11.53□□□□□ -0.56
HDAC7-219ENST00000470668 PCP2Q8IVA1 136 aa11.53□□□□□ -0.56
HDAC7-219ENST00000470668 IGKV1D-17A0A075B6S4 117 aa11.53□□□□□ -0.56
HDAC7-219ENST00000470668 GLMPQ8WWB7 406 aa11.53□□□□□ -0.56
HDAC7-219ENST00000470668 TMEM133Q9H2Q1 129 aa11.53□□□□□ -0.56
HDAC7-219ENST00000470668 ANXA2RQ3ZCQ2 193 aa11.53□□□□□ -0.56
HDAC7-219ENST00000470668 FAM159AQ6UWV7 190 aa11.53□□□□□ -0.56
HDAC7-219ENST00000470668 RAX2Q96IS3 184 aa11.53□□□□□ -0.56
HDAC7-219ENST00000470668 A0A0U1RRA0 63 aa11.52□□□□□ -0.56
HDAC7-219ENST00000470668 TMEM249Q2WGJ8 235 aa11.52□□□□□ -0.56
HDAC7-219ENST00000470668 SMPXQ9UHP9 88 aa11.52□□□□□ -0.56
HDAC7-219ENST00000470668 ZNF503-AS2A6NEH8 195 aa11.52□□□□□ -0.57
HDAC7-219ENST00000470668 TMEM8BA6NDV4 472 aa11.52□□□□□ -0.57
HDAC7-219ENST00000470668 SH2D1AO60880 128 aa11.52□□□□□ -0.57
HDAC7-219ENST00000470668 ASIPP42127 132 aa11.52□□□□□ -0.57
HDAC7-219ENST00000470668 WDR86Q86TI4 376 aa11.52□□□□□ -0.57
HDAC7-219ENST00000470668 RHOGP84095 191 aa11.52□□□□□ -0.57
HDAC7-219ENST00000470668 PRR7Q8TB68 274 aa11.52□□□□□ -0.57
HDAC7-219ENST00000470668 VGLL1Q99990 258 aa11.52□□□□□ -0.57
HDAC7-219ENST00000470668 TRAV8-4A0A0B4J246 113 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 K7EMI3 77 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 ETV2O00321 342 aaPredicted RBP11.51□□□□□ -0.57
HDAC7-219ENST00000470668 LAGE3Q14657 143 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 SLC25A2Q9BXI2 301 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 A0A0C4DFX4 3053 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 C9JAW5 83 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 RBX1P62877 108 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 ANKRD39Q53RE8 183 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 FAM231DQ6ZW35 169 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 ERG28Q9UKR5 140 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 EML6Q6ZMW3 1958 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 COL4A3Q01955 1670 aa11.51□□□□□ -0.57
HDAC7-219ENST00000470668 IGHV1-18A0A0C4DH31 117 aa11.5□□□□□ -0.57
HDAC7-219ENST00000470668 NPIPB6E9PJ23 425 aa11.5□□□□□ -0.57
HDAC7-219ENST00000470668 SS18L1O75177 396 aaPredicted RBP11.5□□□□□ -0.57
HDAC7-219ENST00000470668 Q0VFX4 171 aa11.5□□□□□ -0.57
HDAC7-219ENST00000470668 CIRBPQ14011 172 aaKnown RBP11.5□□□□□ -0.57
HDAC7-219ENST00000470668 DKK2Q9UBU2 259 aa11.5□□□□□ -0.57
HDAC7-219ENST00000470668 IGKV3D-20A0A0C4DH25 116 aa11.5□□□□□ -0.57
HDAC7-219ENST00000470668 LINC01549A6NIU2 74 aa11.5□□□□□ -0.57
HDAC7-219ENST00000470668 TMEM14BQ9NUH8 114 aa11.5□□□□□ -0.57
HDAC7-219ENST00000470668 DPM3Q9P2X0 92 aa11.5□□□□□ -0.57
HDAC7-219ENST00000470668 SPRR3Q9UBC9 169 aa11.5□□□□□ -0.57
HDAC7-219ENST00000470668 PVRIGQ6DKI7 326 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 CLEC19AQ6UXS0 136 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 ZNF747Q9BV97 191 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 CSPG4Q6UVK1 2322 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 FAM106CPP0CH98 169 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 SIGLEC8Q9NYZ4 499 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 KIF26AQ9ULI4 1882 aaPredicted RBP11.49□□□□□ -0.57
HDAC7-219ENST00000470668 LYNX1G3V0Z9 82 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 DNAL4O96015 105 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 LYNX1P0DP58 116 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 PRR20EP86478 221 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 PRR20CP86479 221 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 PRR20DP86480 221 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 PRR20BP86481 221 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 PRR20AP86496 221 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 SRSF6Q13247 344 aaKnown RBP11.49□□□□□ -0.57
HDAC7-219ENST00000470668 TTTY13Q9BZ97 58 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 NDUFB8O95169 186 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 NPC2P61916 151 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 ORMDL2Q53FV1 153 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 TMEM167AQ8TBQ9 72 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 TRGV9Q99603 122 aa11.49□□□□□ -0.57
HDAC7-219ENST00000470668 IGKV3OR2-268A0A0C4DH90 116 aa11.48□□□□□ -0.57
HDAC7-219ENST00000470668 SUMO2P61956 95 aaKnown RBP11.48□□□□□ -0.57
HDAC7-219ENST00000470668 FGF23Q9GZV9 251 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-219ENST00000470668 IGLC1P0CG04 106 aa11.48□□□□□ -0.57
HDAC7-219ENST00000470668 ZNF134P52741 427 aa11.48□□□□□ -0.57
HDAC7-219ENST00000470668 KIAA1671Q9BY89 1806 aa11.48□□□□□ -0.57
HDAC7-219ENST00000470668 LAMA3Q16787 3333 aa11.48□□□□□ -0.57
HDAC7-219ENST00000470668 TNFRSF6BO95407 300 aa11.48□□□□□ -0.57
HDAC7-219ENST00000470668 FAM104BQ5XKR9 115 aa11.48□□□□□ -0.57
HDAC7-219ENST00000470668 ODF3L1Q8IXM7 274 aa11.48□□□□□ -0.57
HDAC7-219ENST00000470668 F8W1H4 67 aa11.47□□□□□ -0.57
HDAC7-219ENST00000470668 H0YJW9 148 aa11.47□□□□□ -0.57
HDAC7-219ENST00000470668 NTN3O00634 580 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms