RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 EIF5AP63241 154 aaKnown RBP3.61□□□□□ -1.83
SF3B1-208ENST00000470268 GUK1Q16774 197 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 ATP6V1FQ16864 119 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 ANXA2RQ3ZCQ2 193 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 TIGITQ495A1 244 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 ETFRF1Q6IPR1 90 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 EIF5AL1Q6IS14 154 aaKnown RBP3.61□□□□□ -1.83
SF3B1-208ENST00000470268 UNQ9165/PRO28630Q6UXU0 137 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 CBLN2Q8IUK8 224 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 KLHL30-AS1Q8NEE0 82 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 RNF125Q96EQ8 232 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 SLC35E1Q96K37 410 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 CITED1Q99966 193 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 C20orf24Q9BUV8 137 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 GGTLC1Q9BX51 225 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 NPCDR1Q9BY65 106 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 OR51M1Q9H341 326 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 ATRQ13535 2644 aa3.61□□□□□ -1.83
SF3B1-208ENST00000470268 TENM1Q9UKZ4 2725 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 ZFP92A6NM28 416 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 OR2C1O95371 312 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 IFNA5P01569 189 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 S100A8P05109 93 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 LINC00869P0C866 280 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 PSG1P11464 419 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 EDN2P20800 178 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 ARL3P36405 182 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 NSUN5P1Q3KNT7 163 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 AKR1C8PQ5T2L2 129 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 MIC13Q5XKP0 118 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 IL34Q6ZMJ4 242 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 RPP25LQ8N5L8 163 aaKnown RBP3.6□□□□□ -1.83
SF3B1-208ENST00000470268 OR11H1Q8NG94 326 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 SPATA3Q8NHX4 192 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 SCGB1C1Q8TD33 95 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 C2CD4CQ8TF44 421 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 C4orf3Q8WVX3 66 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 TMEM158Q8WZ71 300 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 PARD6GQ9BYG4 376 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-208ENST00000470268 CTDSP1Q9GZU7 261 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 EIF5A2Q9GZV4 153 aaKnown RBP3.6□□□□□ -1.83
SF3B1-208ENST00000470268 SLC25A22Q9H936 323 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 NIT2Q9NQR4 276 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 PEF1Q9UBV8 284 aaKnown RBP3.6□□□□□ -1.83
SF3B1-208ENST00000470268 TSSC4Q9Y5U2 329 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-208ENST00000470268 A4D1N5 150 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 GAGE10A6NGK3 116 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 YIF1AO95070 293 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 HOXD3P31249 432 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-208ENST00000470268 USF2Q15853 346 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-208ENST00000470268 SPATA31B1PQ5VZV4 182 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 TOMM20LQ6UXN7 152 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 PATE2Q6UY27 113 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 CYP2G1PQ6ZSU1 146 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 ZFP82Q8N141 532 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 RXFP4Q8TDU9 374 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 TRGV9Q99603 122 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 TM2D2Q9BX73 214 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 GNG13Q9P2W3 67 aa3.6□□□□□ -1.83
SF3B1-208ENST00000470268 PUS1Q9Y606 427 aaKnown RBP eCLIP3.6□□□□□ -1.83
SF3B1-208ENST00000470268 TRRAPQ9Y4A5 3859 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 TRAV30A0A087WSZ9 112 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 GGCTO75223 188 aaKnown RBP3.59□□□□□ -1.83
SF3B1-208ENST00000470268 MPDU1O75352 247 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 TOMM40O96008 361 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 HSPB1P04792 205 aaKnown RBP3.59□□□□□ -1.83
SF3B1-208ENST00000470268 IL4P05112 153 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 RD3LP0DJH9 198 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 RPL29P47914 159 aaKnown RBP3.59□□□□□ -1.83
SF3B1-208ENST00000470268 YPEL3P61236 119 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-208ENST00000470268 FFAR4Q5NUL3 377 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 C10orf91Q5T1B1 145 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 MORN5Q5VZ52 161 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 UQCC3Q6UW78 93 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 NDUFA11Q86Y39 141 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 OR1N2Q8NGR9 330 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 TMEM37Q8WXS4 190 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 DLX4Q92988 240 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-208ENST00000470268 GNPNAT1Q96EK6 184 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-208ENST00000470268 PXMP4Q9Y6I8 212 aa3.59□□□□□ -1.83
SF3B1-208ENST00000470268 WI2-2373I1.2A0A1W2PRP0 233 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 RBFOX3A6NFN3 312 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 UMAD1C9J7I0 102 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 LINC01619G3V211 115 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 CCL24O00175 119 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 ZNF207O43670 478 aaKnown RBP3.58□□□□□ -1.84
SF3B1-208ENST00000470268 APOHP02749 345 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-208ENST00000470268 SNRPCP09234 159 aaKnown RBP3.58□□□□□ -1.84
SF3B1-208ENST00000470268 ORM2P19652 201 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 SYNJ2BPP57105 145 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 PLP1P60201 277 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 SNRPEP62304 92 aaKnown RBP3.58□□□□□ -1.84
SF3B1-208ENST00000470268 KLF5Q13887 457 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-208ENST00000470268 RPEL1Q2QD12 228 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 TMEM41BQ5BJD5 291 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 ADAMTSL5Q6ZMM2 481 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 GPHB5Q86YW7 130 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 CYB561D1Q8N8Q1 229 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 OR51G1Q8NGK1 321 aa3.58□□□□□ -1.84
SF3B1-208ENST00000470268 TMEM190Q8WZ59 177 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms