RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 SSX7Q7RTT5 188 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 APRG1Q8IVJ8 170 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 TMED6Q8WW62 240 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 RAB24Q969Q5 203 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 FXYD5Q96DB9 178 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 C20orf173Q96LM9 149 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 CITED4Q96RK1 184 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 OR51M1Q9H341 326 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 ZNF586Q9NXT0 402 aa7.84□□□□□ -1.15
SMC1A-206ENST00000470241 SLC17A3O00476 420 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 ISLRO14498 428 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 STAG3L2P0CL84 134 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 STAG3L3P0CL85 134 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 IGHV4-30-4P0DP06 118 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 C4BPBP20851 252 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 ID1P41134 155 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 TAS2R45P59539 299 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 KHDC3LQ587J8 217 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 PSMG4Q5JS54 123 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 AKR1C8PQ5T2L2 129 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 SAMD13Q5VXD3 122 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 LCN15Q6UWW0 184 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 MRAPQ8TCY5 172 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 RNF141Q8WVD5 230 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 SAT2Q96F10 170 aaPredicted RBP7.83□□□□□ -1.16
SMC1A-206ENST00000470241 C16orf92Q96LL3 132 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 PAXXQ9BUH6 204 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 ACTR3CQ9C0K3 210 aaPredicted RBP7.83□□□□□ -1.16
SMC1A-206ENST00000470241 FBN3Q75N90 2809 aa7.83□□□□□ -1.16
SMC1A-206ENST00000470241 SORL1Q92673 2214 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 TRBV19A0A075B6N1 114 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 CTXND1A0A1B0GTU2 59 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 A8MZ25 164 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 UMAD1C9J7I0 102 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 OR7C2O60412 319 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 NDUFB4O95168 129 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 OR10J4P0C629 311 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 HLA-DMBP28068 263 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 FHITP49789 147 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 SNRPD3P62318 126 aaKnown RBP7.82□□□□□ -1.16
SMC1A-206ENST00000470241 GUK1Q16774 197 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 RNF182Q8N6D2 247 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 LINC00052Q96N35 136 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 SRD5A3Q9H8P0 318 aa7.82□□□□□ -1.16
SMC1A-206ENST00000470241 ZNF331Q9NQX6 463 aaPredicted RBP7.82□□□□□ -1.16
SMC1A-206ENST00000470241 RBMY1BA6NDE4 496 aaKnown RBP7.81□□□□□ -1.16
SMC1A-206ENST00000470241 RBMY1EA6NEQ0 496 aaKnown RBP7.81□□□□□ -1.16
SMC1A-206ENST00000470241 KNCNA6PVL3 124 aa7.81□□□□□ -1.16
SMC1A-206ENST00000470241 ZNF253O75346 499 aa7.81□□□□□ -1.16
SMC1A-206ENST00000470241 NBEAP1P0C6P0 100 aa7.81□□□□□ -1.16
SMC1A-206ENST00000470241 RBMY1DP0C7P1 496 aaKnown RBP7.81□□□□□ -1.16
SMC1A-206ENST00000470241 ARL14EPLP0DKL9 152 aa7.81□□□□□ -1.16
SMC1A-206ENST00000470241 DEFB1P60022 68 aa7.81□□□□□ -1.16
SMC1A-206ENST00000470241 UBE2L3P68036 154 aaKnown RBP7.81□□□□□ -1.16
SMC1A-206ENST00000470241 DEFB121Q5J5C9 76 aa7.81□□□□□ -1.16
SMC1A-206ENST00000470241 EIF5AL1Q6IS14 154 aaKnown RBP7.81□□□□□ -1.16
SMC1A-206ENST00000470241 PQLC2Q6ZP29 291 aa7.81□□□□□ -1.16
SMC1A-206ENST00000470241 LRRC20Q8TCA0 184 aa7.81□□□□□ -1.16
SMC1A-206ENST00000470241 BLNKQ8WV28 456 aa7.81□□□□□ -1.16
SMC1A-206ENST00000470241 SLC50A1Q9BRV3 221 aa7.81□□□□□ -1.16
SMC1A-206ENST00000470241 MEGF8Q7Z7M0 2845 aa7.8□□□□□ -1.16
SMC1A-206ENST00000470241 DNAH9Q9NYC9 4486 aa7.8□□□□□ -1.16
SMC1A-206ENST00000470241 FRMD6-AS1P0C7T7 363 aa7.8□□□□□ -1.16
SMC1A-206ENST00000470241 GCHFRP30047 84 aa7.8□□□□□ -1.16
SMC1A-206ENST00000470241 PDE6HQ13956 83 aa7.8□□□□□ -1.16
SMC1A-206ENST00000470241 PSG3Q16557 428 aa7.8□□□□□ -1.16
SMC1A-206ENST00000470241 GDF5OSQ5U4N7 250 aa7.8□□□□□ -1.16
SMC1A-206ENST00000470241 LINC00322Q6ZN03 302 aaPredicted RBP7.8□□□□□ -1.16
SMC1A-206ENST00000470241 FAM213BQ8TBF2 198 aa7.8□□□□□ -1.16
SMC1A-206ENST00000470241 SUN5Q8TC36 379 aa7.8□□□□□ -1.16
SMC1A-206ENST00000470241 PHYHIPLQ96FC7 376 aa7.8□□□□□ -1.16
SMC1A-206ENST00000470241 TUBA4BQ9H853 241 aa7.8□□□□□ -1.16
SMC1A-206ENST00000470241 MAP1LC3B2A6NCE7 125 aa7.79□□□□□ -1.16
SMC1A-206ENST00000470241 F6UB75 175 aa7.79□□□□□ -1.16
SMC1A-206ENST00000470241 CXorf1O96002 111 aa7.79□□□□□ -1.16
SMC1A-206ENST00000470241 PRB4P10163 310 aaPredicted RBP7.79□□□□□ -1.16
SMC1A-206ENST00000470241 SULT1A2P50226 295 aa7.79□□□□□ -1.16
SMC1A-206ENST00000470241 ACTL10Q5JWF8 245 aa7.79□□□□□ -1.16
SMC1A-206ENST00000470241 DPPA3Q6W0C5 159 aa7.79□□□□□ -1.16
SMC1A-206ENST00000470241 FOXI2Q6ZQN5 318 aa7.79□□□□□ -1.16
SMC1A-206ENST00000470241 EXOC3-AS1Q8N2X6 119 aa7.79□□□□□ -1.16
SMC1A-206ENST00000470241 MBD3L1Q8WWY6 194 aa7.79□□□□□ -1.16
SMC1A-206ENST00000470241 MAP1LC3BQ9GZQ8 125 aa7.79□□□□□ -1.16
SMC1A-206ENST00000470241 SAV1Q9H4B6 383 aaPredicted RBP7.79□□□□□ -1.16
SMC1A-206ENST00000470241 PRKDCP78527 4128 aaKnown RBP7.79□□□□□ -1.16
SMC1A-206ENST00000470241 LOC102724200A0A096LPH7 203 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-206ENST00000470241 ZNF705FA8MVS1 300 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-206ENST00000470241 PRAC2D3DTV9 90 aa7.78□□□□□ -1.16
SMC1A-206ENST00000470241 H3BMM0 161 aa7.78□□□□□ -1.16
SMC1A-206ENST00000470241 M0R3E3 92 aa7.78□□□□□ -1.16
SMC1A-206ENST00000470241 HLA-DRB4P13762 266 aa7.78□□□□□ -1.16
SMC1A-206ENST00000470241 RPL35AP18077 110 aaKnown RBP7.78□□□□□ -1.16
SMC1A-206ENST00000470241 RAB5CP51148 216 aa7.78□□□□□ -1.16
SMC1A-206ENST00000470241 FGF8P55075 233 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-206ENST00000470241 RANP62826 216 aaKnown RBP7.78□□□□□ -1.16
SMC1A-206ENST00000470241 PSG9Q00887 426 aa7.78□□□□□ -1.16
SMC1A-206ENST00000470241 FAM74A1Q5RGS3 127 aa7.78□□□□□ -1.16
SMC1A-206ENST00000470241 TRPT1Q86TN4 253 aaKnown RBP7.78□□□□□ -1.16
SMC1A-206ENST00000470241 ZNF738Q8NE65 137 aa7.78□□□□□ -1.16
SMC1A-206ENST00000470241 TMPRSS5Q9H3S3 457 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms