RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 TMEM140Q9NV12 185 aa6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 TECRQ9NZ01 308 aaKnown RBP6.68□□□□□ -1.34
SYNGAP1-205ENST00000470232 FAT2Q9NYQ8 4349 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 DNAH2Q9P225 4427 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 TRAV3A0A0B4J244 114 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 PPP5D1E7EU14 171 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 FCN1O00602 326 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 SPRY2O43597 315 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 PDE6DO43924 150 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 FABP4P15090 132 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 ATP5G3P48201 142 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 FAM209BQ5JX69 171 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 MIC13Q5XKP0 118 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 FAM71F2Q6NXP2 309 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 OR1P1Q8NH06 330 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 ADTRPQ96IZ2 230 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 PXMP4Q9Y6I8 212 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 DNAH11Q96DT5 4516 aa6.67□□□□□ -1.34
SYNGAP1-205ENST00000470232 A0A1W2PPQ1 181 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 C15orf61A6NNL5 157 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 PHOX2AO14813 284 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 GGCTO75223 188 aaKnown RBP6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 CXorf1O96002 111 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 MT-CO2P00403 227 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 NPY1RP25929 384 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 LGALS7P47929 136 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 APOC4P55056 127 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 FAM3BP58499 235 aaPredicted RBP6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 DEFB114Q30KQ6 69 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 GCSAMLQ5JQS6 135 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 FAM78BQ5VT40 261 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 ZNF833PQ6ZTB9 187 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 Q6ZWC4 215 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 TMEM183AQ8IXX5 376 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 VKORC1L1Q8N0U8 176 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 TMEM170AQ8WVE7 144 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 BTF3L4Q96K17 158 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 PACRGQ96M98 296 aaPredicted RBP6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 MGST2Q99735 147 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 TXNDC17Q9BRA2 123 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 WFDC10AQ9H1F0 79 aa6.66□□□□□ -1.34
SYNGAP1-205ENST00000470232 XKRY2A2RUG3 117 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 PROP1O75360 226 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 CA2P00918 260 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 IL6RP08887 468 aaPredicted RBP6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 RD3LP0DJH9 198 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 DEFA4P12838 97 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 NPPCP23582 126 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 HSPE1P61604 102 aaKnown RBP6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 RAB31Q13636 194 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 FXYD3Q14802 87 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 ACTL10Q5JWF8 245 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 CDPF1Q6NVV7 123 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 OR51G1Q8NGK1 321 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 ACY3Q96HD9 319 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 HINT2Q9BX68 163 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 NPVFQ9HCQ7 196 aa6.65□□□□□ -1.34
SYNGAP1-205ENST00000470232 SAA2-SAA4A0A096LPE2 208 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 PRSS46E5RG02 174 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 GATCO43716 136 aaKnown RBP6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 NDUFB4O95168 129 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 TYMSP04818 313 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 STAG3L2P0CL84 134 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 STAG3L3P0CL85 134 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 SAA2P0DJI9 122 aaPredicted RBP6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 ARL14EPLP0DKL9 152 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 GCHFRP30047 84 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 RHOBP62745 196 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 PSG5Q15238 335 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 SPATA31B1PQ5VZV4 182 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 OR4A47Q6IF82 309 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 SLC24A4Q8NFF2 622 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 RNF183Q96D59 192 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 UHRF2Q96PU4 802 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 HIST1H2BLQ99880 126 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 SLC35D1Q9NTN3 355 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 PRNDQ9UKY0 176 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 FUT9Q9Y231 359 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 WASHC3Q9Y3C0 194 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 OR51B2Q9Y5P1 312 aa6.64□□□□□ -1.35
SYNGAP1-205ENST00000470232 SCO2A0A1W2PP80 73 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 ZNF320A2RRD8 509 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 UPK2O00526 184 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 AMBPP02760 352 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 CT45A6P0DMU7 189 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 CT45A5P0DMU8 189 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 CT45A7P0DMV0 189 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 HIST1H1BP16401 226 aaKnown RBP6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 PKIAP61925 76 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 GAMTQ14353 236 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 RTL8BQ17RB0 113 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 COA6Q5JTJ3 125 aaKnown RBP6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 TEPPQ6URK8 271 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 LINC01551Q86U37 167 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 STPG3Q8N7X2 389 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 OR10G8Q8NGN5 311 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 TMEM37Q8WXS4 190 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 IMMP2LQ96T52 175 aa6.63□□□□□ -1.35
SYNGAP1-205ENST00000470232 PRO1933Q9H354 126 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms