RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 TMEM256Q8N2U0 113 aa12.34□□□□□ -0.43
COL7A1-208ENST00000470076 RBM38Q9H0Z9 239 aaKnown RBP12.34□□□□□ -0.43
COL7A1-208ENST00000470076 PPP1R14DQ9NXH3 145 aa12.34□□□□□ -0.43
COL7A1-208ENST00000470076 DYNC1H1Q14204 4646 aaKnown RBP12.34□□□□□ -0.43
COL7A1-208ENST00000470076 TRAV12-2A0A075B6T6 113 aa12.33□□□□□ -0.44
COL7A1-208ENST00000470076 CENPXA8MT69 81 aa12.33□□□□□ -0.44
COL7A1-208ENST00000470076 TSC22D2O75157 780 aa12.33□□□□□ -0.44
COL7A1-208ENST00000470076 DEFB130BP0DP73 79 aa12.33□□□□□ -0.44
COL7A1-208ENST00000470076 DEFB130AP0DP74 79 aa12.33□□□□□ -0.44
COL7A1-208ENST00000470076 IAH1Q2TAA2 248 aaPredicted RBP12.33□□□□□ -0.44
COL7A1-208ENST00000470076 PXDC1Q5TGL8 231 aa12.33□□□□□ -0.44
COL7A1-208ENST00000470076 ARV1Q9H2C2 271 aa12.33□□□□□ -0.44
COL7A1-208ENST00000470076 SCGB1D2O95969 90 aa12.32□□□□□ -0.44
COL7A1-208ENST00000470076 ANXA7P20073 488 aaKnown RBP12.32□□□□□ -0.44
COL7A1-208ENST00000470076 PATE2Q6UY27 113 aa12.32□□□□□ -0.44
COL7A1-208ENST00000470076 ZNF546Q86UE3 836 aa12.32□□□□□ -0.44
COL7A1-208ENST00000470076 LINC01587Q99440 93 aa12.32□□□□□ -0.44
COL7A1-208ENST00000470076 ATG101Q9BSB4 218 aa12.32□□□□□ -0.44
COL7A1-208ENST00000470076 MUC4Q99102 2169 aa12.32□□□□□ -0.44
COL7A1-208ENST00000470076 PLAC8L1A1L4L8 177 aa12.31□□□□□ -0.44
COL7A1-208ENST00000470076 GOSR2O14653 212 aa12.31□□□□□ -0.44
COL7A1-208ENST00000470076 MRPS12O15235 138 aaKnown RBP12.31□□□□□ -0.44
COL7A1-208ENST00000470076 CXCL2P19875 107 aa12.31□□□□□ -0.44
COL7A1-208ENST00000470076 AZU1P20160 251 aa12.31□□□□□ -0.44
COL7A1-208ENST00000470076 TAS2R60P59551 318 aa12.31□□□□□ -0.44
COL7A1-208ENST00000470076 SLC38A11Q08AI6 406 aa12.31□□□□□ -0.44
COL7A1-208ENST00000470076 C1orf134Q5TEV5 83 aa12.31□□□□□ -0.44
COL7A1-208ENST00000470076 LCN15Q6UWW0 184 aa12.31□□□□□ -0.44
COL7A1-208ENST00000470076 ZBTB8BQ8NAP8 495 aaPredicted RBP12.31□□□□□ -0.44
COL7A1-208ENST00000470076 RPUSD4Q96CM3 377 aaKnown RBP12.31□□□□□ -0.44
COL7A1-208ENST00000470076 GGACTQ9BVM4 153 aa12.31□□□□□ -0.44
COL7A1-208ENST00000470076 LINC00854A0A1B0GVQ3 168 aa12.3□□□□□ -0.44
COL7A1-208ENST00000470076 F5H768 121 aa12.3□□□□□ -0.44
COL7A1-208ENST00000470076 ATP5G1P05496 136 aa12.3□□□□□ -0.44
COL7A1-208ENST00000470076 BTCP35070 178 aa12.3□□□□□ -0.44
COL7A1-208ENST00000470076 CDKN1BP46527 198 aa12.3□□□□□ -0.44
COL7A1-208ENST00000470076 ATP5G3P48201 142 aa12.3□□□□□ -0.44
COL7A1-208ENST00000470076 CNPY1Q3B7I2 92 aa12.3□□□□□ -0.44
COL7A1-208ENST00000470076 MITD1Q8WV92 249 aa12.3□□□□□ -0.44
COL7A1-208ENST00000470076 C16orf74Q96GX8 76 aa12.3□□□□□ -0.44
COL7A1-208ENST00000470076 SLC50A1Q9BRV3 221 aa12.3□□□□□ -0.44
COL7A1-208ENST00000470076 GSKIPQ9P0R6 139 aa12.3□□□□□ -0.44
COL7A1-208ENST00000470076 RCL1Q9Y2P8 373 aaKnown RBP12.3□□□□□ -0.44
COL7A1-208ENST00000470076 CBY3A6NI87 242 aa12.29□□□□□ -0.44
COL7A1-208ENST00000470076 AGPAT2O15120 278 aa12.29□□□□□ -0.44
COL7A1-208ENST00000470076 ZNF493Q6ZR52 646 aa12.29□□□□□ -0.44
COL7A1-208ENST00000470076 LINC00305Q7Z4B0 112 aa12.29□□□□□ -0.44
COL7A1-208ENST00000470076 BPIFA4PQ86YQ2 179 aa12.29□□□□□ -0.44
COL7A1-208ENST00000470076 SDHCQ99643 169 aaPredicted RBP12.29□□□□□ -0.44
COL7A1-208ENST00000470076 ZNF331Q9NQX6 463 aaPredicted RBP12.29□□□□□ -0.44
COL7A1-208ENST00000470076 TIMM8BQ9Y5J9 83 aaPredicted RBP12.29□□□□□ -0.44
COL7A1-208ENST00000470076 C7orf66A4D0T2 115 aa12.28□□□□□ -0.44
COL7A1-208ENST00000470076 HTN1P15515 57 aa12.28□□□□□ -0.44
COL7A1-208ENST00000470076 ARL16Q0P5N6 197 aa12.28□□□□□ -0.44
COL7A1-208ENST00000470076 FCN2Q15485 313 aa12.28□□□□□ -0.44
COL7A1-208ENST00000470076 C20orf144Q9BQM9 153 aa12.28□□□□□ -0.44
COL7A1-208ENST00000470076 H7BYZ3 331 aa12.27□□□□□ -0.45
COL7A1-208ENST00000470076 COX7A2P2O60397 106 aa12.27□□□□□ -0.45
COL7A1-208ENST00000470076 NUDT3O95989 172 aa12.27□□□□□ -0.45
COL7A1-208ENST00000470076 MBPP02686 304 aaPredicted RBP12.27□□□□□ -0.45
COL7A1-208ENST00000470076 IL7P13232 177 aa12.27□□□□□ -0.45
COL7A1-208ENST00000470076 TMEM263Q8WUH6 116 aaKnown RBP12.27□□□□□ -0.45
COL7A1-208ENST00000470076 RYR1P21817 5038 aa12.27□□□□□ -0.45
COL7A1-208ENST00000470076 ZNF846Q147U1 533 aa12.26□□□□□ -0.45
COL7A1-208ENST00000470076 RNASE8Q8TDE3 154 aaKnown RBP12.26□□□□□ -0.45
COL7A1-208ENST00000470076 MGST2Q99735 147 aa12.26□□□□□ -0.45
COL7A1-208ENST00000470076 NBDYA0A0U1RRE5 68 aa12.25□□□□□ -0.45
COL7A1-208ENST00000470076 L7N2F9 121 aa12.25□□□□□ -0.45
COL7A1-208ENST00000470076 PRB4P10163 310 aaPredicted RBP12.25□□□□□ -0.45
COL7A1-208ENST00000470076 CCL18P55774 89 aa12.25□□□□□ -0.45
COL7A1-208ENST00000470076 VAMP2P63027 116 aa12.25□□□□□ -0.45
COL7A1-208ENST00000470076 RAB31Q13636 194 aa12.25□□□□□ -0.45
COL7A1-208ENST00000470076 C10orf113Q5VZT2 155 aa12.25□□□□□ -0.45
COL7A1-208ENST00000470076 OR10J6PQ8NGY7 276 aa12.25□□□□□ -0.45
COL7A1-208ENST00000470076 ZNRF2Q8NHG8 242 aa12.25□□□□□ -0.45
COL7A1-208ENST00000470076 TMEM37Q8WXS4 190 aa12.25□□□□□ -0.45
COL7A1-208ENST00000470076 C20orf85Q9H1P6 137 aa12.25□□□□□ -0.45
COL7A1-208ENST00000470076 NOP10Q9NPE3 64 aaKnown RBP12.25□□□□□ -0.45
COL7A1-208ENST00000470076 PXMP4Q9Y6I8 212 aa12.25□□□□□ -0.45
COL7A1-208ENST00000470076 SNRPCP09234 159 aaKnown RBP12.24□□□□□ -0.45
COL7A1-208ENST00000470076 IGLC2P0DOY2 106 aa12.24□□□□□ -0.45
COL7A1-208ENST00000470076 CAMLGP49069 296 aa12.24□□□□□ -0.45
COL7A1-208ENST00000470076 OPCMLQ14982 345 aa12.24□□□□□ -0.45
COL7A1-208ENST00000470076 Q6ZRG5 221 aa12.24□□□□□ -0.45
COL7A1-208ENST00000470076 SLC17A3O00476 420 aa12.23□□□□□ -0.45
COL7A1-208ENST00000470076 CCSO14618 274 aa12.23□□□□□ -0.45
COL7A1-208ENST00000470076 MORN5Q5VZ52 161 aa12.23□□□□□ -0.45
COL7A1-208ENST00000470076 CCDC28AQ8IWP9 274 aa12.23□□□□□ -0.45
COL7A1-208ENST00000470076 RNF141Q8WVD5 230 aa12.23□□□□□ -0.45
COL7A1-208ENST00000470076 DNAJC4Q9NNZ3 241 aa12.23□□□□□ -0.45
COL7A1-208ENST00000470076 PRAC2D3DTV9 90 aa12.22□□□□□ -0.45
COL7A1-208ENST00000470076 H3BTX0 84 aa12.22□□□□□ -0.45
COL7A1-208ENST00000470076 BCAP31P51572 246 aa12.22□□□□□ -0.45
COL7A1-208ENST00000470076 CAV2P51636 162 aa12.22□□□□□ -0.45
COL7A1-208ENST00000470076 CLINT1Q14677 625 aa12.22□□□□□ -0.45
COL7A1-208ENST00000470076 KIR3DS1Q14943 382 aa12.22□□□□□ -0.45
COL7A1-208ENST00000470076 GUK1Q16774 197 aa12.22□□□□□ -0.45
COL7A1-208ENST00000470076 GFI1BQ5VTD9 330 aa12.22□□□□□ -0.45
COL7A1-208ENST00000470076 NRARPQ7Z6K4 114 aa12.22□□□□□ -0.45
COL7A1-208ENST00000470076 ZNF575Q86XF7 245 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms