RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PUS1Q9Y606 427 aaKnown RBP eCLIP4.67□□□□□ -1.66
PTCD3-208ENST00000469585 ANK3Q12955 4377 aaKnown RBP4.67□□□□□ -1.66
PTCD3-208ENST00000469585 IGHV7-4-1A0A0J9YVY3 117 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 OR11H12B2RN74 326 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 H3BP45 60 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 ZNF207O43670 478 aaKnown RBP4.66□□□□□ -1.66
PTCD3-208ENST00000469585 IL4P05112 153 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 CTSGP08311 255 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 SPP1P10451 314 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 BTCP35070 178 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 ID1P41134 155 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 GALR1P47211 349 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 LYZP61626 148 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 SELENOTP62341 195 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 POLR2GP62487 172 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTCD3-208ENST00000469585 FGL1Q08830 312 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 DEFB114Q30KQ6 69 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 ADAMTSL4-AS1Q5T5F5 129 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 Q6ZRG5 221 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 LRRC20Q8TCA0 184 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 GGACTQ9BVM4 153 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 RHPN1-AS1Q9BWJ2 59 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 MED28Q9H204 178 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 TBC1D24Q9ULP9 559 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 MGAM2Q2M2H8 2515 aa4.66□□□□□ -1.66
PTCD3-208ENST00000469585 IGKV3-7A0A075B6H7 116 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 IGHV3OR16-8A0A075B7F1 116 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 E5RGE8 158 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 FNDC10F2Z333 226 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 C17orf112F2Z3M2 114 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 CCSO14618 274 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 PITX3O75364 302 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 S100A11P31949 105 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 MFAP2P55001 183 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 APOC4P55056 127 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 NUTF2P61970 127 aaKnown RBP4.65□□□□□ -1.67
PTCD3-208ENST00000469585 BSXQ3C1V8 233 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 TIGITQ495A1 244 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 LRRC37A5PQ49AS3 106 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 PRSS54Q6PEW0 395 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 TCF24Q7RTU0 167 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 ZNF546Q86UE3 836 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 STXBP6Q8NFX7 210 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 OR4D5Q8NGN0 318 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 ASB13Q8WXK3 278 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 OR10C1Q96KK4 312 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 GPR82Q96P67 336 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 TRGV9Q99603 122 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 B9D2Q9BPU9 175 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 CHRDL1Q9BU40 450 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 NMES1Q9C002 83 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 NPVFQ9HCQ7 196 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 SMPXQ9UHP9 88 aa4.65□□□□□ -1.67
PTCD3-208ENST00000469585 RCL1Q9Y2P8 373 aaKnown RBP4.65□□□□□ -1.67
PTCD3-208ENST00000469585 WI2-2373I1.2A0A1W2PRP0 233 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 TMEM213A2RRL7 107 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 SNURFLB1AK76 121 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 MPDU1O75352 247 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 IFNA5P01569 189 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 OR5G3P0C626 314 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 METTL15P1P0C7V9 234 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 IGLC1P0CG04 106 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 P2RY1P47900 373 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 TFPI2P48307 235 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 MEOX2P50222 304 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 RRAS2P62070 204 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-208ENST00000469585 BAXQ07812 192 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 SLC38A11Q08AI6 406 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 GAMTQ14353 236 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 ATP6V1FQ16864 119 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 C1orf194Q5T5A4 169 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 TOMM20LQ6UXN7 152 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 UNQ9165/PRO28630Q6UXU0 137 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 ACOT7LQ6ZUV0 252 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 TMEM144Q7Z5S9 345 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 STHQ8IWL8 128 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 TMEM61Q8N0U2 210 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 OR8I2Q8N0Y5 310 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 OR10G8Q8NGN5 311 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 OR1B1Q8NGR6 318 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 SCGB1C1Q8TD33 95 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 PFDN5Q99471 154 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 ASCL2Q99929 193 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 MARVELD1Q9BSK0 173 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 SRD5A3Q9H8P0 318 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 UQCC1Q9NVA1 299 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 HIGD1AQ9Y241 93 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 FBN3Q75N90 2809 aa4.64□□□□□ -1.67
PTCD3-208ENST00000469585 NOTCH3Q9UM47 2321 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 LOC102724200A0A096LPH7 203 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-208ENST00000469585 IGHV3-49A0A0A0MS15 119 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 TRAV2A0A0B4J234 112 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 K7EIL1 84 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 K7EPK0 472 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 CHEK1O14757 476 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 COX7A2P2O60397 106 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 HYPMO75409 117 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 DEDDO75618 318 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 C8orf88P0DMB2 117 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 ORM2P19652 201 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms