RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 H3BTX0 84 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 MPDU1O75352 247 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 IGKV3-20P01619 116 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 RBMY1A1P0DJD3 496 aaKnown RBP8.44□□□□□ -1.06
MCF2L-222ENST00000469558 RBMY1CP0DJD4 496 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 RPL12P30050 165 aaKnown RBP8.44□□□□□ -1.06
MCF2L-222ENST00000469558 RAB31Q13636 194 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 RBMY1FQ15415 496 aaKnown RBP8.44□□□□□ -1.06
MCF2L-222ENST00000469558 TMEM41BQ5BJD5 291 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 FAM78BQ5VT40 261 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 SPATA31B1PQ5VZV4 182 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 SAT2Q96F10 170 aaPredicted RBP8.44□□□□□ -1.06
MCF2L-222ENST00000469558 FAM167A-AS1Q96KT0 104 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 ATP5SQ99766 215 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 SLC35B3Q9H1N7 401 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 ZNF331Q9NQX6 463 aaPredicted RBP8.44□□□□□ -1.06
MCF2L-222ENST00000469558 RFNGQ9Y644 331 aa8.44□□□□□ -1.06
MCF2L-222ENST00000469558 IGHV4-28A0A0C4DH34 117 aa8.43□□□□□ -1.06
MCF2L-222ENST00000469558 DEFB4AO15263 64 aa8.43□□□□□ -1.06
MCF2L-222ENST00000469558 ZNF705DP0CH99 300 aaPredicted RBP8.43□□□□□ -1.06
MCF2L-222ENST00000469558 ZNF705BP0CI00 300 aaPredicted RBP8.43□□□□□ -1.06
MCF2L-222ENST00000469558 PET100P0DJ07 73 aa8.43□□□□□ -1.06
MCF2L-222ENST00000469558 RGS21Q2M5E4 152 aa8.43□□□□□ -1.06
MCF2L-222ENST00000469558 ZNF705AQ6ZN79 300 aaPredicted RBP8.43□□□□□ -1.06
MCF2L-222ENST00000469558 MED28Q9H204 178 aa8.43□□□□□ -1.06
MCF2L-222ENST00000469558 RPRMQ9NS64 109 aa8.43□□□□□ -1.06
MCF2L-222ENST00000469558 XCL2Q9UBD3 114 aa8.43□□□□□ -1.06
MCF2L-222ENST00000469558 HYDINQ4G0P3 5121 aa8.43□□□□□ -1.06
MCF2L-222ENST00000469558 ZNF705FA8MVS1 300 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-222ENST00000469558 PRAC2D3DTV9 90 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 CXCL2P19875 107 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 S100A7P31151 101 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 CNN1P51911 297 aaKnown RBP8.42□□□□□ -1.06
MCF2L-222ENST00000469558 FXYD7P58549 80 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 FGL1Q08830 312 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 PSG3Q16557 428 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 Q6ZRG5 221 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 BPIFA4PQ86YQ2 179 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 OR1L4Q8NGR5 311 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 PFDN5Q99471 154 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 SMIM3Q9BZL3 60 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 HRH4Q9H3N8 390 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 ZNF586Q9NXT0 402 aa8.42□□□□□ -1.06
MCF2L-222ENST00000469558 CRXO43186 299 aaPredicted RBP8.41□□□□□ -1.06
MCF2L-222ENST00000469558 NDUFB4O95168 129 aa8.41□□□□□ -1.06
MCF2L-222ENST00000469558 GIPP09681 153 aaPredicted RBP8.41□□□□□ -1.06
MCF2L-222ENST00000469558 PYYP10082 97 aa8.41□□□□□ -1.06
MCF2L-222ENST00000469558 PSG9Q00887 426 aa8.41□□□□□ -1.06
MCF2L-222ENST00000469558 LCN15Q6UWW0 184 aa8.41□□□□□ -1.06
MCF2L-222ENST00000469558 MIR17HGQ75NE6 70 aa8.41□□□□□ -1.06
MCF2L-222ENST00000469558 C1orf158Q8N1D5 194 aa8.41□□□□□ -1.06
MCF2L-222ENST00000469558 OR4B1Q8NGF8 309 aa8.41□□□□□ -1.06
MCF2L-222ENST00000469558 ZNF503Q96F45 646 aa8.41□□□□□ -1.06
MCF2L-222ENST00000469558 SLC25A2Q9BXI2 301 aa8.41□□□□□ -1.06
MCF2L-222ENST00000469558 PARD6GQ9BYG4 376 aaPredicted RBP8.41□□□□□ -1.06
MCF2L-222ENST00000469558 TMEM14CQ9P0S9 112 aa8.41□□□□□ -1.06
MCF2L-222ENST00000469558 EBLN2Q6P2I7 272 aa8.4□□□□□ -1.06
MCF2L-222ENST00000469558 S100A7AQ86SG5 101 aa8.4□□□□□ -1.06
MCF2L-222ENST00000469558 ZNF738Q8NE65 137 aa8.4□□□□□ -1.06
MCF2L-222ENST00000469558 OR8A1Q8NGG7 326 aa8.4□□□□□ -1.06
MCF2L-222ENST00000469558 AQP10Q96PS8 301 aa8.4□□□□□ -1.06
MCF2L-222ENST00000469558 SLC50A1Q9BRV3 221 aa8.4□□□□□ -1.06
MCF2L-222ENST00000469558 TRBV19A0A075B6N1 114 aa8.39□□□□□ -1.07
MCF2L-222ENST00000469558 RNF222A6NCQ9 220 aa8.39□□□□□ -1.07
MCF2L-222ENST00000469558 MIFP14174 115 aa8.39□□□□□ -1.07
MCF2L-222ENST00000469558 NANOS2P60321 138 aaKnown RBP8.39□□□□□ -1.07
MCF2L-222ENST00000469558 NUTF2P61970 127 aaKnown RBP8.39□□□□□ -1.07
MCF2L-222ENST00000469558 PMS2P11Q13670 270 aa8.39□□□□□ -1.07
MCF2L-222ENST00000469558 RPUSD4Q96CM3 377 aaKnown RBP8.39□□□□□ -1.07
MCF2L-222ENST00000469558 NEU1Q99519 415 aa8.39□□□□□ -1.07
MCF2L-222ENST00000469558 C1QTNF4Q9BXJ3 329 aa8.39□□□□□ -1.07
MCF2L-222ENST00000469558 MFFQ9GZY8 342 aa8.39□□□□□ -1.07
MCF2L-222ENST00000469558 CELA1Q9UNI1 258 aa8.39□□□□□ -1.07
MCF2L-222ENST00000469558 RNF24Q9Y225 148 aa8.39□□□□□ -1.07
MCF2L-222ENST00000469558 LCE6AA0A183 80 aa8.38□□□□□ -1.07
MCF2L-222ENST00000469558 M0R2Z0 102 aa8.38□□□□□ -1.07
MCF2L-222ENST00000469558 ZNF253O75346 499 aa8.38□□□□□ -1.07
MCF2L-222ENST00000469558 SPINK13Q1W4C9 94 aa8.38□□□□□ -1.07
MCF2L-222ENST00000469558 ASB13Q8WXK3 278 aa8.38□□□□□ -1.07
MCF2L-222ENST00000469558 FXYD5Q96DB9 178 aa8.38□□□□□ -1.07
MCF2L-222ENST00000469558 M0R3E3 92 aa8.37□□□□□ -1.07
MCF2L-222ENST00000469558 EIF3GO75821 320 aaKnown RBP eCLIP8.37□□□□□ -1.07
MCF2L-222ENST00000469558 DUSP14O95147 198 aaKnown RBP8.37□□□□□ -1.07
MCF2L-222ENST00000469558 HIST1H1EP10412 219 aaKnown RBP8.37□□□□□ -1.07
MCF2L-222ENST00000469558 HIST1H1AQ02539 215 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-222ENST00000469558 KIR3DS1Q14943 382 aa8.37□□□□□ -1.07
MCF2L-222ENST00000469558 GUK1Q16774 197 aa8.37□□□□□ -1.07
MCF2L-222ENST00000469558 FFAR4Q5NUL3 377 aa8.37□□□□□ -1.07
MCF2L-222ENST00000469558 CEMP1Q6PRD7 247 aaPredicted RBP8.37□□□□□ -1.07
MCF2L-222ENST00000469558 BAP18Q8IXM2 172 aa8.37□□□□□ -1.07
MCF2L-222ENST00000469558 IGF2BP2-AS1Q96M15 143 aa8.37□□□□□ -1.07
MCF2L-222ENST00000469558 MRPL32Q9BYC8 188 aaKnown RBP8.37□□□□□ -1.07
MCF2L-222ENST00000469558 KCNIP2Q9NS61 270 aa8.37□□□□□ -1.07
MCF2L-222ENST00000469558 TNFSF18Q9UNG2 199 aa8.37□□□□□ -1.07
MCF2L-222ENST00000469558 FUT9Q9Y231 359 aa8.37□□□□□ -1.07
MCF2L-222ENST00000469558 CXorf65A6NEN9 183 aa8.36□□□□□ -1.07
MCF2L-222ENST00000469558 C17orf112F2Z3M2 114 aa8.36□□□□□ -1.07
MCF2L-222ENST00000469558 BOLA2-SMG1P6H3BVE0 249 aa8.36□□□□□ -1.07
MCF2L-222ENST00000469558 PRM2P04554 102 aa8.36□□□□□ -1.07
MCF2L-222ENST00000469558 PDE6HQ13956 83 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms