RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 FAM90A2PQ658T7 463 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 C3orf56Q8N813 242 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 OR9G4Q8NGQ1 327 aa9.68□□□□□ -0.86
TRAF4-208ENST00000469529 DLX4Q92988 240 aaPredicted RBP9.68□□□□□ -0.86
TRAF4-208ENST00000469529 YTHDF2Q9Y5A9 579 aaKnown RBP9.68□□□□□ -0.86
TRAF4-208ENST00000469529 IGHV3OR16-8A0A075B7F1 116 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 KRBOX1C9JBD0 128 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 C9JQL5 133 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 F6UZH7 168 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 PSG9Q00887 426 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 DEFB136Q30KP8 78 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 C10orf91Q5T1B1 145 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 SAMD13Q5VXD3 122 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 SIGLEC15Q6ZMC9 328 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 C11orf44Q8N8P7 122 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 ZNF747Q9BV97 191 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 OTORQ9NRC9 128 aa9.67□□□□□ -0.86
TRAF4-208ENST00000469529 C11orf94C9JXX5 98 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 ZNF207O43670 478 aaKnown RBP9.66□□□□□ -0.86
TRAF4-208ENST00000469529 ATP6V1G1O75348 118 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 CSN3P07498 182 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 FOLR2P14207 255 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 S100A1P23297 94 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 SLURP1P55000 103 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 SUMO1P63165 101 aaKnown RBP9.66□□□□□ -0.86
TRAF4-208ENST00000469529 ADAMTSL5Q6ZMM2 481 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 IQCF2Q8IXL9 164 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 RXFP4Q8TDU9 374 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 C11orf52Q96A22 123 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 RPUSD4Q96CM3 377 aaKnown RBP9.66□□□□□ -0.86
TRAF4-208ENST00000469529 CITED4Q96RK1 184 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 SLC50A1Q9BRV3 221 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 TREM1Q9NP99 234 aa9.66□□□□□ -0.86
TRAF4-208ENST00000469529 TRAV2A0A0B4J234 112 aa9.65□□□□□ -0.86
TRAF4-208ENST00000469529 ZNF785A8K8V0 405 aa9.65□□□□□ -0.86
TRAF4-208ENST00000469529 M0QZ24 198 aa9.65□□□□□ -0.86
TRAF4-208ENST00000469529 ATF4P18848 351 aaPredicted RBP9.65□□□□□ -0.86
TRAF4-208ENST00000469529 RANP62826 216 aaKnown RBP9.65□□□□□ -0.86
TRAF4-208ENST00000469529 CST9LP1Q5W188 147 aa9.65□□□□□ -0.86
TRAF4-208ENST00000469529 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.65□□□□□ -0.86
TRAF4-208ENST00000469529 HIST1H2BAQ96A08 127 aa9.65□□□□□ -0.86
TRAF4-208ENST00000469529 SEC11CQ9BY50 192 aa9.65□□□□□ -0.86
TRAF4-208ENST00000469529 ZNF331Q9NQX6 463 aaPredicted RBP9.65□□□□□ -0.86
TRAF4-208ENST00000469529 MLXQ9UH92 298 aa9.65□□□□□ -0.86
TRAF4-208ENST00000469529 PRELID1Q9Y255 219 aa9.65□□□□□ -0.86
TRAF4-208ENST00000469529 TRAV25A0A0B4J276 109 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 PGPA6NDG6 321 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 GGTLC3B5MD39 225 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 OVOL1O14753 267 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 UBE2G2P60604 165 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 FAM74A3Q4VXF1 159 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 C5orf17Q8NAS9 161 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 MRPL53Q96EL3 112 aaKnown RBP9.64□□□□□ -0.87
TRAF4-208ENST00000469529 Q9H3A6 140 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 NRN1Q9NPD7 142 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 EPDR1Q9UM22 224 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 KLF12Q9Y4X4 402 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 ANK2Q01484 3957 aa9.64□□□□□ -0.87
TRAF4-208ENST00000469529 IGHV3OR16-13A0A075B7E8 117 aa9.63□□□□□ -0.87
TRAF4-208ENST00000469529 IGHV3-74A0A0B4J1X5 117 aa9.63□□□□□ -0.87
TRAF4-208ENST00000469529 SERTM2A0A1B0GWG4 89 aa9.63□□□□□ -0.87
TRAF4-208ENST00000469529 A0A1W2PRX2 142 aa9.63□□□□□ -0.87
TRAF4-208ENST00000469529 SOCS3O14543 225 aa9.63□□□□□ -0.87
TRAF4-208ENST00000469529 S100A9P06702 114 aaKnown RBP9.63□□□□□ -0.87
TRAF4-208ENST00000469529 ATP5G3P48201 142 aa9.63□□□□□ -0.87
TRAF4-208ENST00000469529 SOHLH1Q5JUK2 328 aa9.63□□□□□ -0.87
TRAF4-208ENST00000469529 BLNKQ8WV28 456 aa9.63□□□□□ -0.87
TRAF4-208ENST00000469529 DUX3Q96PT4 197 aa9.63□□□□□ -0.87
TRAF4-208ENST00000469529 CARHSP1Q9Y2V2 147 aaKnown RBP9.63□□□□□ -0.87
TRAF4-208ENST00000469529 IGHV3-49A0A0A0MS15 119 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 IGHV3-66A0A0C4DH42 116 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 FBLL1A6NHQ2 334 aaKnown RBP9.62□□□□□ -0.87
TRAF4-208ENST00000469529 ISLRO14498 428 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 SFTA3P0C7M3 94 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 DEFB114Q30KQ6 69 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 NSUN5P1Q3KNT7 163 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 TCF24Q7RTU0 167 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 LINC00482Q8N8I6 264 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 CYB561D1Q8N8Q1 229 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 WFDC9Q8NEX5 89 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 C2CD4CQ8TF44 421 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 AAMDCQ9H7C9 122 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 TENM1Q9UKZ4 2725 aa9.62□□□□□ -0.87
TRAF4-208ENST00000469529 TRAV8-2A0A0B4J237 113 aa9.61□□□□□ -0.87
TRAF4-208ENST00000469529 TRBV6-1A0A0K0K1D8 114 aa9.61□□□□□ -0.87
TRAF4-208ENST00000469529 SLC17A3O00476 420 aa9.61□□□□□ -0.87
TRAF4-208ENST00000469529 TSPAN4O14817 238 aa9.61□□□□□ -0.87
TRAF4-208ENST00000469529 TAS2R60P59551 318 aa9.61□□□□□ -0.87
TRAF4-208ENST00000469529 SHISA2Q6UWI4 295 aa9.61□□□□□ -0.87
TRAF4-208ENST00000469529 OR2K2Q8NGT1 345 aa9.61□□□□□ -0.87
TRAF4-208ENST00000469529 C9JCJ5 164 aa9.6□□□□□ -0.87
TRAF4-208ENST00000469529 TCRAP04437 139 aa9.6□□□□□ -0.87
TRAF4-208ENST00000469529 ID1P41134 155 aa9.6□□□□□ -0.87
TRAF4-208ENST00000469529 INSL3P51460 131 aa9.6□□□□□ -0.87
TRAF4-208ENST00000469529 PAFAH1B2P68402 229 aa9.6□□□□□ -0.87
TRAF4-208ENST00000469529 HIST2H2BDQ6DRA6 164 aa9.6□□□□□ -0.87
TRAF4-208ENST00000469529 ATG101Q9BSB4 218 aa9.6□□□□□ -0.87
TRAF4-208ENST00000469529 PPP1R14DQ9NXH3 145 aa9.6□□□□□ -0.87
TRAF4-208ENST00000469529 LY96Q9Y6Y9 160 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms