RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 IBA57Q5T440 356 aaKnown RBP7.23□□□□□ -1.25
SMC1A-205ENST00000469129 FAM231DQ6ZW35 169 aa7.23□□□□□ -1.25
SMC1A-205ENST00000469129 Q86TA4 180 aa7.23□□□□□ -1.25
SMC1A-205ENST00000469129 BAGE2Q86Y30 109 aa7.23□□□□□ -1.25
SMC1A-205ENST00000469129 PYGO2Q9BRQ0 406 aa7.23□□□□□ -1.25
SMC1A-205ENST00000469129 IL36BQ9NZH7 164 aa7.23□□□□□ -1.25
SMC1A-205ENST00000469129 LOC105371267A0A1B0GV96 52 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 A0A1W2PPQ1 181 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 H3BTX0 84 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 LTAP01374 205 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 IGLV2-8P01709 118 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 TYMSP04818 313 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 S100A6P06703 90 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 ELANEP08246 267 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 FAM3BP58499 235 aaPredicted RBP7.22□□□□□ -1.25
SMC1A-205ENST00000469129 FOXL1Q12952 345 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 FOXE3Q13461 319 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 OR4X2Q8NGF9 303 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 SRD5A3Q9H8P0 318 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 AURKAIP1Q9NWT8 199 aaPredicted RBP7.22□□□□□ -1.25
SMC1A-205ENST00000469129 CLEC5AQ9NY25 188 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 ZNF492Q9P255 531 aa7.22□□□□□ -1.25
SMC1A-205ENST00000469129 A0A1W2PS18 150 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 SLC17A3O00476 420 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 BUB3O43684 328 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 SNRPCP09234 159 aaKnown RBP7.21□□□□□ -1.26
SMC1A-205ENST00000469129 PSMB8P28062 276 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 BMI1P35226 326 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 COX19Q49B96 90 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 GOLT1AQ6ZVE7 132 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 EXOC3-AS1Q8N2X6 119 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 SIGLECL1Q8N7X8 197 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 ZNF702PQ9H963 129 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 ZFP30Q9Y2G7 519 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 V9GYV3 84 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 CSPG4Q6UVK1 2322 aa7.21□□□□□ -1.26
SMC1A-205ENST00000469129 ITPR3Q14573 2671 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 ZNF469Q96JG9 3925 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-205ENST00000469129 HIVEP1P15822 2718 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 TRAV34A0A0B4J273 112 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 IGHV3-35A0A0C4DH35 117 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 CLPSL1A2RUU4 121 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 ZNF785A8K8V0 405 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 ZNF705GA8MUZ8 300 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-205ENST00000469129 DIRC3C9JPN6 131 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 GATCO43716 136 aaKnown RBP7.2□□□□□ -1.26
SMC1A-205ENST00000469129 IGHV3-11P01762 117 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 RPL15P61313 204 aaKnown RBP7.2□□□□□ -1.26
SMC1A-205ENST00000469129 OR5I1Q13606 314 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 PSG3Q16557 428 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 TMEM95Q3KNT9 176 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 FAM106AQ4KMX7 169 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 Q6ZS46 218 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 Q8N2B8 174 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 CIARTQ8N365 385 aaPredicted RBP7.2□□□□□ -1.26
SMC1A-205ENST00000469129 MRPL53Q96EL3 112 aaKnown RBP7.2□□□□□ -1.26
SMC1A-205ENST00000469129 TMEM160Q9NX00 188 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 PEF1Q9UBV8 284 aaKnown RBP7.2□□□□□ -1.26
SMC1A-205ENST00000469129 U3KQE9 123 aa7.2□□□□□ -1.26
SMC1A-205ENST00000469129 TEP1Q99973 2627 aaKnown RBP7.2□□□□□ -1.26
SMC1A-205ENST00000469129 VPS13CQ709C8 3753 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 CT83Q5H943 113 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 SAMD13Q5VXD3 122 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 C16orf54Q6UWD8 224 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 TMEM183AQ8IXX5 376 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 ZFP82Q8N141 532 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 GBGT1Q8N5D6 347 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 NHLRC2Q8NBF2 726 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 OR4B1Q8NGF8 309 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 DAZAP1Q96EP5 407 aaKnown RBP7.19□□□□□ -1.26
SMC1A-205ENST00000469129 LINC00479Q96M42 142 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 NDFIP1Q9BT67 221 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 MLST8Q9BVC4 326 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 KLK15Q9H2R5 256 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 ZNF331Q9NQX6 463 aaPredicted RBP7.19□□□□□ -1.26
SMC1A-205ENST00000469129 DAZ1Q9NQZ3 744 aaKnown RBP7.19□□□□□ -1.26
SMC1A-205ENST00000469129 YAE1D1Q9NRH1 226 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 SERTAD4Q9NUC0 356 aa7.19□□□□□ -1.26
SMC1A-205ENST00000469129 IGHV3OR16-8A0A075B7F1 116 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 ZNF320A2RRD8 509 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 RBAKDNA6NC62 111 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 K7EMT4 169 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 P01737 135 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 LGALS1P09382 135 aaKnown RBP7.18□□□□□ -1.26
SMC1A-205ENST00000469129 CT45A10P0DMU9 189 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 PRR27Q6MZM9 219 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 WDR73Q6P4I2 378 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 IL17RELQ6ZVW7 336 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 PRNTQ86SH4 94 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 RNF152Q8N8N0 203 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 MYOZ3Q8TDC0 251 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 GLMPQ8WWB7 406 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 C17orf77Q96MU5 243 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 RNASE7Q9H1E1 156 aaKnown RBP7.18□□□□□ -1.26
SMC1A-205ENST00000469129 RPP21Q9H633 154 aaKnown RBP7.18□□□□□ -1.26
SMC1A-205ENST00000469129 PSG8Q9UQ74 426 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 UFC1Q9Y3C8 167 aa7.18□□□□□ -1.26
SMC1A-205ENST00000469129 IGHV7-4-1A0A0J9YVY3 117 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 DNAJC9-AS1A6NH13 148 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms