RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 COL6A5A8TX70 2615 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 IGKV1-12A0A0C4DH73 117 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 PQLC2LA1A4F0 135 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 C7orf66A4D0T2 115 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 TMEM210A6NLX4 147 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 BET1O15155 118 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 PLXNB1O43157 2135 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 NDUFA2O43678 99 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 ARL6IP5O75915 188 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 HAND1O96004 215 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 IFNA5P01569 189 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 IGKV1D-12P01611 117 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 APOC1P02654 83 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 HTR1AP08908 422 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 FBP1P09467 338 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 C8orf88P0DMB2 117 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 CFL1P23528 166 aaKnown RBP2.34□□□□□ -2.03
GPNMB-207ENST00000468723 GADD45AP24522 165 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 GNG10P50151 68 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 BLCAPP62952 87 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 GNG3P63215 75 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 CTAG1AP78358 180 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 AESQ08117 197 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 ZNF616Q08AN1 781 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 DIAPH2-AS1Q14236 149 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 GRK1Q15835 563 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 LRRC75BQ2VPJ9 315 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 ABCA11PQ4W5N1 156 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 CENPWQ5EE01 88 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 SPATA31B1PQ5VZV4 182 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 UNQ9165/PRO28630Q6UXU0 137 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 CCDC121Q6ZUS5 278 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 OR5A2Q8NGI9 324 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 CYGBQ8WWM9 190 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 RTN4IP1Q8WWV3 396 aaPredicted RBP2.34□□□□□ -2.03
GPNMB-207ENST00000468723 ASB13Q8WXK3 278 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 RBPMSQ93062 196 aaKnown RBP2.34□□□□□ -2.03
GPNMB-207ENST00000468723 PTH2Q96A98 100 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 GPER1Q99527 375 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 TLNRD1Q9H1K6 362 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 TAS2R4Q9NYW5 299 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 NOP16Q9Y3C1 178 aaKnown RBP2.34□□□□□ -2.03
GPNMB-207ENST00000468723 V9GYS6 101 aa2.34□□□□□ -2.03
GPNMB-207ENST00000468723 DNAH3Q8TD57 4116 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 IGKV2D-24A0A075B6R9 120 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 IGKV1-9A0A0C4DH69 117 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 ARRDC5A6NEK1 342 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 TMEM250H0YL14 139 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 DEGS1O15121 323 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 TGOLN2O43493 480 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 CDRT1O95170 752 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 OR2H2O95918 312 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 IGLV3-1P01715 115 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 RPSAP08865 295 aaKnown RBP2.33□□□□□ -2.04
GPNMB-207ENST00000468723 REG1BP48304 166 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 NKX2-5P52952 324 aaPredicted RBP2.33□□□□□ -2.04
GPNMB-207ENST00000468723 AP2S1P53680 142 aaPredicted RBP2.33□□□□□ -2.04
GPNMB-207ENST00000468723 CDC42P60953 191 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 PPP1R1AQ13522 171 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 HES1Q14469 280 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 RGS21Q2M5E4 152 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 SMIM21Q3B7S5 101 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 XAF1Q6GPH4 301 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 LAIR2Q6ISS4 152 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 SLC25A34Q6PIV7 304 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 FAM131AQ6UXB0 335 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 TCF23Q7RTU1 214 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 GID4Q8IVV7 300 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 C10orf67Q8IYJ2 551 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 OR8A1Q8NGG7 326 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 OR51A2Q8NGJ7 313 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 HAVCR2Q8TDQ0 301 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 ASB17Q8WXJ9 295 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 CEP19Q96LK0 163 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF714Q96N38 554 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 GABARAPL1Q9H0R8 117 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 MAP1LC3AQ9H492 121 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF286AQ9HBT8 521 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 HRASLSQ9HDD0 168 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 KAAG1Q9UBP8 84 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 GLS2Q9UI32 602 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 VPREB3Q9UKI3 123 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 STAB1Q9NY15 2570 aa2.33□□□□□ -2.04
GPNMB-207ENST00000468723 ATRQ13535 2644 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 MEIKINA0A087WXM9 373 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 LOC100130705A0A1B0GUX0 176 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 TCRBV4S1A1TA0A5B7 111 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 IZUMO1RA6ND01 250 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 C17orf98A8MV24 154 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 H0YJX3 145 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 M0R1W7 72 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF737O75373 536 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF324O75467 553 aaPredicted RBP2.32□□□□□ -2.04
GPNMB-207ENST00000468723 CYB5AP00167 134 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 LINC00614P0C842 121 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF728P0DKX0 622 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 CXCL3P19876 107 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 CDK2P24941 298 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 CNTFRP26992 372 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 TGFBR2P37173 567 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms