RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 A0A087X0K7 114 aa14.81□□□□□ -0.04
COL9A3-207ENST00000467819 NUDT3O95989 172 aa14.81□□□□□ -0.04
COL9A3-207ENST00000467819 OR4E1P0C645 316 aa14.81□□□□□ -0.04
COL9A3-207ENST00000467819 SLC38A11Q08AI6 406 aa14.81□□□□□ -0.04
COL9A3-207ENST00000467819 LINC00854A0A1B0GVQ3 168 aa14.8□□□□□ -0.04
COL9A3-207ENST00000467819 ANXA7P20073 488 aaKnown RBP14.8□□□□□ -0.04
COL9A3-207ENST00000467819 FAM3BP58499 235 aaPredicted RBP14.8□□□□□ -0.04
COL9A3-207ENST00000467819 TRIQKQ629K1 86 aa14.8□□□□□ -0.04
COL9A3-207ENST00000467819 TMEM14EPQ6UXP3 125 aa14.8□□□□□ -0.04
COL9A3-207ENST00000467819 PATE2Q6UY27 113 aa14.8□□□□□ -0.04
COL9A3-207ENST00000467819 S100A7AQ86SG5 101 aa14.8□□□□□ -0.04
COL9A3-207ENST00000467819 TMEM256Q8N2U0 113 aa14.8□□□□□ -0.04
COL9A3-207ENST00000467819 ARV1Q9H2C2 271 aa14.8□□□□□ -0.04
COL9A3-207ENST00000467819 NPVFQ9HCQ7 196 aa14.8□□□□□ -0.04
COL9A3-207ENST00000467819 MGAT4CQ9UBM8 478 aa14.8□□□□□ -0.04
COL9A3-207ENST00000467819 NAP1L6A6NFF2 107 aa14.79□□□□□ -0.04
COL9A3-207ENST00000467819 ATP5G1P05496 136 aa14.79□□□□□ -0.04
COL9A3-207ENST00000467819 SNRPCP09234 159 aaKnown RBP14.79□□□□□ -0.04
COL9A3-207ENST00000467819 ATP5G3P48201 142 aa14.79□□□□□ -0.04
COL9A3-207ENST00000467819 BAK1Q16611 211 aa14.79□□□□□ -0.04
COL9A3-207ENST00000467819 C4orf46Q504U0 113 aa14.79□□□□□ -0.04
COL9A3-207ENST00000467819 TEPPQ6URK8 271 aa14.79□□□□□ -0.04
COL9A3-207ENST00000467819 OR10P1Q8NGE3 313 aa14.79□□□□□ -0.04
COL9A3-207ENST00000467819 RPUSD4Q96CM3 377 aaKnown RBP14.79□□□□□ -0.04
COL9A3-207ENST00000467819 FNDC10F2Z333 226 aa14.78□□□□□ -0.04
COL9A3-207ENST00000467819 TAS2R60P59551 318 aa14.78□□□□□ -0.04
COL9A3-207ENST00000467819 IAH1Q2TAA2 248 aaPredicted RBP14.78□□□□□ -0.04
COL9A3-207ENST00000467819 K7EPK0 472 aa14.77□□□□□ -0.05
COL9A3-207ENST00000467819 GOSR2O14653 212 aa14.77□□□□□ -0.05
COL9A3-207ENST00000467819 MRPS12O15235 138 aaKnown RBP14.77□□□□□ -0.05
COL9A3-207ENST00000467819 ZBTB8BQ8NAP8 495 aaPredicted RBP14.77□□□□□ -0.05
COL9A3-207ENST00000467819 C16orf74Q96GX8 76 aa14.77□□□□□ -0.05
COL9A3-207ENST00000467819 GSKIPQ9P0R6 139 aa14.77□□□□□ -0.05
COL9A3-207ENST00000467819 CBY3A6NI87 242 aa14.76□□□□□ -0.05
COL9A3-207ENST00000467819 CDKN1BP46527 198 aa14.76□□□□□ -0.05
COL9A3-207ENST00000467819 ARL16Q0P5N6 197 aa14.76□□□□□ -0.05
COL9A3-207ENST00000467819 LINC00305Q7Z4B0 112 aa14.76□□□□□ -0.05
COL9A3-207ENST00000467819 ZNF546Q86UE3 836 aa14.76□□□□□ -0.05
COL9A3-207ENST00000467819 ZNRF2Q8NHG8 242 aa14.76□□□□□ -0.05
COL9A3-207ENST00000467819 RNF24Q9Y225 148 aa14.76□□□□□ -0.05
COL9A3-207ENST00000467819 RCL1Q9Y2P8 373 aaKnown RBP14.76□□□□□ -0.05
COL9A3-207ENST00000467819 TIMM8BQ9Y5J9 83 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-207ENST00000467819 NBDYA0A0U1RRE5 68 aa14.75□□□□□ -0.05
COL9A3-207ENST00000467819 AGPAT2O15120 278 aa14.75□□□□□ -0.05
COL9A3-207ENST00000467819 TSC22D2O75157 780 aa14.75□□□□□ -0.05
COL9A3-207ENST00000467819 TNP2Q05952 138 aa14.75□□□□□ -0.05
COL9A3-207ENST00000467819 LCN15Q6UWW0 184 aa14.75□□□□□ -0.05
COL9A3-207ENST00000467819 RNF141Q8WVD5 230 aa14.75□□□□□ -0.05
COL9A3-207ENST00000467819 PARD6GQ9BYG4 376 aaPredicted RBP14.75□□□□□ -0.05
COL9A3-207ENST00000467819 RBM38Q9H0Z9 239 aaKnown RBP14.75□□□□□ -0.05
COL9A3-207ENST00000467819 NOP10Q9NPE3 64 aaKnown RBP14.75□□□□□ -0.05
COL9A3-207ENST00000467819 ZNF331Q9NQX6 463 aaPredicted RBP14.75□□□□□ -0.05
COL9A3-207ENST00000467819 H3BTX0 84 aa14.74□□□□□ -0.05
COL9A3-207ENST00000467819 CXCL2P19875 107 aa14.74□□□□□ -0.05
COL9A3-207ENST00000467819 BTCP35070 178 aa14.74□□□□□ -0.05
COL9A3-207ENST00000467819 CCL18P55774 89 aa14.74□□□□□ -0.05
COL9A3-207ENST00000467819 TAS2R30P59541 319 aa14.74□□□□□ -0.05
COL9A3-207ENST00000467819 KIR3DS1Q14943 382 aa14.74□□□□□ -0.05
COL9A3-207ENST00000467819 PXDC1Q5TGL8 231 aa14.74□□□□□ -0.05
COL9A3-207ENST00000467819 SLC50A1Q9BRV3 221 aa14.74□□□□□ -0.05
COL9A3-207ENST00000467819 ABCA13Q86UQ4 5058 aa14.74□□□□□ -0.05
COL9A3-207ENST00000467819 HSPG2P98160 4391 aa14.73□□□□□ -0.05
COL9A3-207ENST00000467819 CENPXA8MT69 81 aa14.73□□□□□ -0.05
COL9A3-207ENST00000467819 COX7A2P2O60397 106 aa14.73□□□□□ -0.05
COL9A3-207ENST00000467819 ZNF493Q6ZR52 646 aa14.73□□□□□ -0.05
COL9A3-207ENST00000467819 BPIFA4PQ86YQ2 179 aa14.73□□□□□ -0.05
COL9A3-207ENST00000467819 RNASE8Q8TDE3 154 aaKnown RBP14.73□□□□□ -0.05
COL9A3-207ENST00000467819 TMEM263Q8WUH6 116 aaKnown RBP14.73□□□□□ -0.05
COL9A3-207ENST00000467819 LINC00588Q9Y4M8 146 aa14.73□□□□□ -0.05
COL9A3-207ENST00000467819 C7orf66A4D0T2 115 aa14.72□□□□□ -0.05
COL9A3-207ENST00000467819 PRAC2D3DTV9 90 aa14.72□□□□□ -0.05
COL9A3-207ENST00000467819 H7BYZ3 331 aa14.72□□□□□ -0.05
COL9A3-207ENST00000467819 SLC17A3O00476 420 aa14.72□□□□□ -0.05
COL9A3-207ENST00000467819 MBPP02686 304 aaPredicted RBP14.72□□□□□ -0.05
COL9A3-207ENST00000467819 CLINT1Q14677 625 aa14.72□□□□□ -0.05
COL9A3-207ENST00000467819 MORN5Q5VZ52 161 aa14.72□□□□□ -0.05
COL9A3-207ENST00000467819 C6orf223Q8N319 242 aa14.72□□□□□ -0.05
COL9A3-207ENST00000467819 SDHCQ99643 169 aaPredicted RBP14.72□□□□□ -0.05
COL9A3-207ENST00000467819 MGST2Q99735 147 aa14.72□□□□□ -0.05
COL9A3-207ENST00000467819 CCSO14618 274 aa14.71□□□□□ -0.05
COL9A3-207ENST00000467819 OPCMLQ14982 345 aa14.71□□□□□ -0.05
COL9A3-207ENST00000467819 OR10J6PQ8NGY7 276 aa14.71□□□□□ -0.05
COL9A3-207ENST00000467819 MITD1Q8WV92 249 aa14.71□□□□□ -0.05
COL9A3-207ENST00000467819 TMEM37Q8WXS4 190 aa14.71□□□□□ -0.05
COL9A3-207ENST00000467819 GGACTQ9BVM4 153 aa14.71□□□□□ -0.05
COL9A3-207ENST00000467819 LRP1BQ9NZR2 4599 aa14.7□□□□□ -0.06
COL9A3-207ENST00000467819 J3KRW8 73 aa14.7□□□□□ -0.06
COL9A3-207ENST00000467819 GFI1BQ5VTD9 330 aa14.7□□□□□ -0.06
COL9A3-207ENST00000467819 C10orf113Q5VZT2 155 aa14.7□□□□□ -0.06
COL9A3-207ENST00000467819 SSX7Q7RTT5 188 aa14.7□□□□□ -0.06
COL9A3-207ENST00000467819 C16orf90A8MZG2 172 aa14.69□□□□□ -0.06
COL9A3-207ENST00000467819 L7N2F9 121 aa14.69□□□□□ -0.06
COL9A3-207ENST00000467819 VAMP2P63027 116 aa14.69□□□□□ -0.06
COL9A3-207ENST00000467819 OR5I1Q13606 314 aa14.69□□□□□ -0.06
COL9A3-207ENST00000467819 C20orf144Q9BQM9 153 aa14.69□□□□□ -0.06
COL9A3-207ENST00000467819 LSM5Q9Y4Y9 91 aaKnown RBP14.69□□□□□ -0.06
COL9A3-207ENST00000467819 ZNF701M0R085 212 aaPredicted RBP14.68□□□□□ -0.06
COL9A3-207ENST00000467819 IL7P13232 177 aa14.68□□□□□ -0.06
COL9A3-207ENST00000467819 CAMLGP49069 296 aa14.68□□□□□ -0.06
COL9A3-207ENST00000467819 BCAP31P51572 246 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms