RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 IGHV1-69P01742 117 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 PMVKQ15126 192 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 ASCC3Q8N3C0 2202 aaKnown RBP7.07□□□□□ -1.28
HPS4-209ENST00000466781 LY6HO94772 140 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 UBE2E1P51965 193 aa7.07□□□□□ -1.28
HPS4-209ENST00000466781 LTBP2Q14767 1821 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 IGKV1-12A0A0C4DH73 117 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 J3QLI3 93 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 RHODO00212 210 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 IGKV1D-12P01611 117 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 GAGE2AQ6NT46 116 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 SIGMAR1Q99720 223 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 PTPRDP23468 1912 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 H3BMM0 161 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 DKK1O94907 266 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 VWC2Q2TAL6 325 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 RPRMLQ8N4K4 120 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 TMEM158Q8WZ71 300 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 UBE2WQ96B02 151 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 DMRTC2Q8IXT2 367 aaPredicted RBP7.06□□□□□ -1.28
HPS4-209ENST00000466781 LIME1Q9H400 295 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 IGHV3-16A0A0C4DH30 117 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 CR1LQ2VPA4 569 aa7.06□□□□□ -1.28
HPS4-209ENST00000466781 PAX9P55771 341 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 B3GALT5-AS1P59052 145 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 ATP6V0E1O15342 81 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 ESDP10768 282 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 MPZP25189 248 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 IFITM2Q01629 132 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 ZFAND6Q6FIF0 208 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 C1orf122Q6ZSJ8 110 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 GAGE12BA1L429 117 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 GAGE7O76087 117 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 GAGE12FP0CL80 117 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 GAGE12GP0CL81 117 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 GAGE12IP0CL82 117 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 MRAPQ8TCY5 172 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 TPRP12270 2363 aaKnown RBP7.05□□□□□ -1.28
HPS4-209ENST00000466781 IGKV1D-8A0A087WSZ0 117 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 KLK9Q9UKQ9 250 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 SPINK13Q1W4C9 94 aa7.05□□□□□ -1.28
HPS4-209ENST00000466781 CITED2Q99967 270 aaPredicted RBP7.05□□□□□ -1.28
HPS4-209ENST00000466781 IGKV1-27A0A075B6S5 117 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 IGHV2-70DA0A0C4DH43 119 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 KNCNA6PVL3 124 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 PRR31Q5SQ13 230 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 IGKV1D-17A0A075B6S4 117 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 TRAV25A0A0B4J276 109 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 WISP1O95388 367 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 GAGE2BQ13066 116 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 OCIAD2Q56VL3 154 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 BCL6BQ8N143 479 aaPredicted RBP7.04□□□□□ -1.28
HPS4-209ENST00000466781 NUP35Q8NFH5 326 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 PKIGQ9Y2B9 76 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 SMKR1H3BMG3 65 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 CENPFP49454 3210 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 I3L3M4 83 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 TMEM243Q9BU79 118 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 PRB1P04280 392 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 KLF5Q13887 457 aaPredicted RBP7.04□□□□□ -1.28
HPS4-209ENST00000466781 AGMATQ9BSE5 352 aa7.04□□□□□ -1.28
HPS4-209ENST00000466781 DNAJC13O75165 2243 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 SRSF3P84103 164 aaKnown RBP7.03□□□□□ -1.28
HPS4-209ENST00000466781 GAGE6Q13070 117 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 SHANK2-AS3Q9BTD1 123 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 KIF26AQ9ULI4 1882 aaPredicted RBP7.03□□□□□ -1.28
HPS4-209ENST00000466781 GUSBP1Q15486 140 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 ANXA2RQ3ZCQ2 193 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 NMSQ5H8A3 153 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 Q6P435 159 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 IGF2-ASQ6U949 168 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 CHAC1Q9BUX1 264 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 PLXNA2O75051 1894 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 MMP23AO75900 390 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 INAFM2P0DMQ5 153 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 Q86TA4 180 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 GSN-AS1Q9NRJ2 163 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 DKK4Q9UBT3 224 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 TRAV8-1A0A0A6YYK1 113 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 PFN2P35080 140 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 UBE2BP63146 152 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 TMEM75Q8N9X5 138 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 TMEM141Q96I45 108 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 ANAPC1Q9H1A4 1944 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 SOCS3O14543 225 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 CD5LO43866 347 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 ARMS2P0C7Q2 107 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 TAL2Q16559 108 aa7.03□□□□□ -1.28
HPS4-209ENST00000466781 IGF2BP2-AS1Q96M15 143 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 MYLKQ15746 1914 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 LINC00473A8K010 186 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 NDUFS5O43920 106 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 PDE6HQ13956 83 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 TMEM242Q9NWH2 141 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 IGHV1OR15-1A0A075B7D0 117 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 NDUFB8O95169 186 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 RNASE2P10153 161 aaKnown RBP7.02□□□□□ -1.29
HPS4-209ENST00000466781 TCTEX1D4Q5JR98 221 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 NEGR1Q7Z3B1 354 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 TP53TG1Q9Y2A0 90 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms