RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 LINC00052Q96N35 136 aa6.91□□□□□ -1.3
SDCCAG3-208ENST00000466579 ZNF331Q9NQX6 463 aaPredicted RBP6.91□□□□□ -1.3
SDCCAG3-208ENST00000466579 RPRMQ9NS64 109 aa6.91□□□□□ -1.3
SDCCAG3-208ENST00000466579 KMT2CQ8NEZ4 4911 aaKnown RBP6.91□□□□□ -1.3
SDCCAG3-208ENST00000466579 TRAV5A0A0B4J249 113 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 ZNF705EA8MWA4 302 aaPredicted RBP6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 C17orf112F2Z3M2 114 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 ZNF253O75346 499 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 IFNA5P01569 189 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 DEFB1P60022 68 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 GUK1Q16774 197 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 GCSAMLQ5JQS6 135 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 AMTNQ6UX39 209 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 ZNF709Q8N972 641 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 FAM167A-AS1Q96KT0 104 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 SLC50A1Q9BRV3 221 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 MRPL32Q9BYC8 188 aaKnown RBP6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 CLEC5AQ9NY25 188 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 TIMM9Q9Y5J7 89 aa6.9□□□□□ -1.3
SDCCAG3-208ENST00000466579 DYNC2H1Q8NCM8 4307 aaKnown RBP6.9□□□□□ -1.31
SDCCAG3-208ENST00000466579 RNF222A6NCQ9 220 aa6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 H3BQ15 152 aa6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 SMCPP49901 116 aaPredicted RBP6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 NUTF2P61970 127 aaKnown RBP6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 PSG3Q16557 428 aa6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 EBLN2Q6P2I7 272 aa6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 OR2T35Q8NGX2 323 aa6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 SCGB1C1Q8TD33 95 aa6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 SLC25A2Q9BXI2 301 aa6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 C1QTNF4Q9BXJ3 329 aa6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 SMIM3Q9BZL3 60 aa6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 C11orf68Q9H3H3 251 aaKnown RBP6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 ZNF586Q9NXT0 402 aa6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 TNFSF18Q9UNG2 199 aa6.89□□□□□ -1.31
SDCCAG3-208ENST00000466579 TRBV19A0A075B6N1 114 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 F6UB75 175 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 SLC17A3O00476 420 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 DUSP14O95147 198 aaKnown RBP6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 HIST1H1EP10412 219 aaKnown RBP6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 HLA-DMBP28068 263 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 PDE6HQ13956 83 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 ZNF266Q14584 549 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 FAM78BQ5VT40 261 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 IGFL4Q6B9Z1 124 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 MIR17HGQ75NE6 70 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 RNF182Q8N6D2 247 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 Q8NAQ8 132 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 OR2G3Q8NGZ4 309 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 OR11H2Q8NH07 326 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 IL17DQ8TAD2 202 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 RARRES2Q99969 163 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 FUT9Q9Y231 359 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 X6R8D5 127 aa6.88□□□□□ -1.31
SDCCAG3-208ENST00000466579 A0A0J9YWU9 116 aa6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 NDUFB4O95168 129 aa6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 CNN1P51911 297 aaKnown RBP6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 PSG9Q00887 426 aa6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 FFAR4Q5NUL3 377 aa6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 CASC10Q5T4H9 136 aa6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 ZNF705AQ6ZN79 300 aaPredicted RBP6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 INO80EQ8NBZ0 244 aaPredicted RBP6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 ZNF738Q8NE65 137 aa6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 OR8A1Q8NGG7 326 aa6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 MRPL53Q96EL3 112 aaKnown RBP6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 NEU1Q99519 415 aa6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 PSMG3Q9BT73 122 aaPredicted RBP6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 LYSTQ99698 3801 aa6.87□□□□□ -1.31
SDCCAG3-208ENST00000466579 FXYD6-FXYD2A0A087WZ82 144 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 ZNF705FA8MVS1 300 aaPredicted RBP6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 AMBPP02760 352 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 ZNF705DP0CH99 300 aaPredicted RBP6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 ZNF705BP0CI00 300 aaPredicted RBP6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 PYYP10082 97 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 MIFP14174 115 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 M6PRP20645 277 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 RHOBP62745 196 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 OR4B1Q8NGF8 309 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 LRRC20Q8TCA0 184 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 RPUSD4Q96CM3 377 aaKnown RBP6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 FXYD5Q96DB9 178 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 ZNF503Q96F45 646 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 SLC35B3Q9H1N7 401 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 OR51M1Q9H341 326 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 XCL2Q9UBD3 114 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 RFNGQ9Y644 331 aa6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 PLECQ15149 4684 aaKnown RBP6.86□□□□□ -1.31
SDCCAG3-208ENST00000466579 H3BTX0 84 aa6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 CRXO43186 299 aaPredicted RBP6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 IGKV3-20P01619 116 aa6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 SNRPCP09234 159 aaKnown RBP6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 ATP6V0CP27449 155 aa6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 SERF2P84101 59 aa6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 ACOT6Q3I5F7 207 aaPredicted RBP6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 Q6ZNX1 250 aa6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 IGF2BP2-AS1Q96M15 143 aa6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 ODF3Q96PU9 254 aa6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 PAXXQ9BUH6 204 aa6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 MFFQ9GZY8 342 aa6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 PRELID1Q9Y255 219 aa6.85□□□□□ -1.31
SDCCAG3-208ENST00000466579 SACSQ9NZJ4 4579 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms