RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 RAB37Q96AX2 223 aa15.61■□□□□ 0.09
SDF4-205ENST00000465727 PLXNB1O43157 2135 aa15.61■□□□□ 0.09
SDF4-205ENST00000465727 SMIM13P0DJ93 91 aa15.61■□□□□ 0.09
SDF4-205ENST00000465727 SIGLEC9Q9Y336 463 aa15.61■□□□□ 0.09
SDF4-205ENST00000465727 H3BRN7 92 aa15.6■□□□□ 0.09
SDF4-205ENST00000465727 NDUFB3O43676 98 aa15.6■□□□□ 0.09
SDF4-205ENST00000465727 NBL1P41271 181 aa15.6■□□□□ 0.09
SDF4-205ENST00000465727 NMUP48645 174 aa15.6■□□□□ 0.09
SDF4-205ENST00000465727 CCL8P80075 99 aa15.6■□□□□ 0.09
SDF4-205ENST00000465727 SAMD5Q5TGI4 173 aa15.6■□□□□ 0.09
SDF4-205ENST00000465727 LYZL1Q6UWQ5 148 aa15.6■□□□□ 0.09
SDF4-205ENST00000465727 DHRS13Q6UX07 377 aa15.6■□□□□ 0.09
SDF4-205ENST00000465727 NAA38Q9BRA0 125 aaKnown RBP15.6■□□□□ 0.09
SDF4-205ENST00000465727 PIEZO1Q92508 2521 aa15.6■□□□□ 0.09
SDF4-205ENST00000465727 FCN3O75636 299 aa15.59■□□□□ 0.09
SDF4-205ENST00000465727 SCGB1A1P11684 91 aa15.59■□□□□ 0.09
SDF4-205ENST00000465727 ASCL5Q7RTU5 278 aa15.59■□□□□ 0.09
SDF4-205ENST00000465727 AMN1Q8IY45 258 aa15.59■□□□□ 0.09
SDF4-205ENST00000465727 PLCE1Q9P212 2302 aa15.59■□□□□ 0.09
SDF4-205ENST00000465727 PPIAL4EA0A075B759 164 aa15.59■□□□□ 0.09
SDF4-205ENST00000465727 TMEM189A5PLL7 270 aa15.59■□□□□ 0.09
SDF4-205ENST00000465727 FBLL1A6NHQ2 334 aaKnown RBP15.59■□□□□ 0.09
SDF4-205ENST00000465727 I3L2K1 104 aa15.59■□□□□ 0.09
SDF4-205ENST00000465727 PPIAL4FP0DN26 164 aa15.59■□□□□ 0.09
SDF4-205ENST00000465727 MRPL51Q4U2R6 128 aaKnown RBP15.59■□□□□ 0.09
SDF4-205ENST00000465727 PCP2Q8IVA1 136 aa15.59■□□□□ 0.09
SDF4-205ENST00000465727 TMEM133Q9H2Q1 129 aa15.59■□□□□ 0.09
SDF4-205ENST00000465727 TEX22C9J3V5 150 aa15.58■□□□□ 0.09
SDF4-205ENST00000465727 CD40P25942 277 aa15.58■□□□□ 0.09
SDF4-205ENST00000465727 DLX6P56179 175 aa15.58■□□□□ 0.09
SDF4-205ENST00000465727 TNFRSF14Q92956 283 aa15.58■□□□□ 0.09
SDF4-205ENST00000465727 ZFHX2Q9C0A1 2572 aaPredicted RBP15.58■□□□□ 0.08
SDF4-205ENST00000465727 NDUFS7O75251 213 aa15.58■□□□□ 0.08
SDF4-205ENST00000465727 RBP4P02753 201 aa15.58■□□□□ 0.08
SDF4-205ENST00000465727 PDE6HQ13956 83 aa15.58■□□□□ 0.08
SDF4-205ENST00000465727 PLGLAQ15195 96 aa15.58■□□□□ 0.08
SDF4-205ENST00000465727 LINC01559Q495D7 138 aa15.58■□□□□ 0.08
SDF4-205ENST00000465727 S100A7AQ86SG5 101 aa15.58■□□□□ 0.08
SDF4-205ENST00000465727 PPP1R27Q86WC6 154 aa15.58■□□□□ 0.08
SDF4-205ENST00000465727 ICE1Q9Y2F5 2266 aa15.57■□□□□ 0.08
SDF4-205ENST00000465727 TMEM213A2RRL7 107 aa15.57■□□□□ 0.08
SDF4-205ENST00000465727 C17orf100A8MU93 164 aa15.57■□□□□ 0.08
SDF4-205ENST00000465727 IGKV1-17P01599 117 aa15.57■□□□□ 0.08
SDF4-205ENST00000465727 TMEM11P17152 192 aa15.57■□□□□ 0.08
SDF4-205ENST00000465727 COX8CQ7Z4L0 72 aa15.57■□□□□ 0.08
SDF4-205ENST00000465727 SRSF8Q9BRL6 282 aaKnown RBP15.57■□□□□ 0.08
SDF4-205ENST00000465727 APELAP0DMC3 54 aa15.56■□□□□ 0.08
SDF4-205ENST00000465727 IGHV1-8P0DP01 117 aa15.56■□□□□ 0.08
SDF4-205ENST00000465727 TMEM155Q4W5P6 130 aa15.56■□□□□ 0.08
SDF4-205ENST00000465727 SAMD13Q5VXD3 122 aa15.56■□□□□ 0.08
SDF4-205ENST00000465727 IGHV3-72A0A0B4J1Y9 119 aa15.56■□□□□ 0.08
SDF4-205ENST00000465727 TMEM178BH3BS89 294 aa15.56■□□□□ 0.08
SDF4-205ENST00000465727 CEACAM4O75871 244 aa15.56■□□□□ 0.08
SDF4-205ENST00000465727 CKS2P33552 79 aa15.56■□□□□ 0.08
SDF4-205ENST00000465727 WFDC8Q8IUA0 241 aa15.56■□□□□ 0.08
SDF4-205ENST00000465727 C17orf77Q96MU5 243 aa15.56■□□□□ 0.08
SDF4-205ENST00000465727 LINC01546A6NGU7 62 aa15.55■□□□□ 0.08
SDF4-205ENST00000465727 TNFRSF13BO14836 293 aaPredicted RBP15.55■□□□□ 0.08
SDF4-205ENST00000465727 MRPS12O15235 138 aaKnown RBP15.55■□□□□ 0.08
SDF4-205ENST00000465727 NKX2-8O15522 239 aa15.55■□□□□ 0.08
SDF4-205ENST00000465727 AAMDCQ9H7C9 122 aa15.55■□□□□ 0.08
SDF4-205ENST00000465727 ZMAT4Q9H898 229 aa15.55■□□□□ 0.08
SDF4-205ENST00000465727 LOXP28300 417 aaPredicted RBP15.55■□□□□ 0.08
SDF4-205ENST00000465727 C8orf49Q96NF6 230 aa15.55■□□□□ 0.08
SDF4-205ENST00000465727 SH2D1AO60880 128 aa15.54■□□□□ 0.08
SDF4-205ENST00000465727 NPYP01303 97 aa15.54■□□□□ 0.08
SDF4-205ENST00000465727 WT1P19544 449 aaPredicted RBP15.54■□□□□ 0.08
SDF4-205ENST00000465727 VSTM5A8MXK1 200 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 HLA-DRB4P13762 266 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 CNTFRP26992 372 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 PRSS57Q6UWY2 283 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 BCL6BQ8N143 479 aaPredicted RBP15.53■□□□□ 0.08
SDF4-205ENST00000465727 RNF125Q96EQ8 232 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 DKK2Q9UBU2 259 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 SELENOKQ9Y6D0 94 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 HLA-DRB4X5D2U9 266 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 WI2-2373I1.2A0A1W2PRP0 233 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 GCSHP23434 173 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 TCTAP57738 103 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 ZNF491Q8N8L2 437 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 VGLL1Q99990 258 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 KAAG1Q9UBP8 84 aa15.53■□□□□ 0.08
SDF4-205ENST00000465727 CDX4O14627 284 aaPredicted RBP15.52■□□□□ 0.08
SDF4-205ENST00000465727 RPL24P83731 157 aaKnown RBP15.52■□□□□ 0.08
SDF4-205ENST00000465727 TMEM108Q6UXF1 575 aa15.52■□□□□ 0.08
SDF4-205ENST00000465727 ASCL2Q99929 193 aa15.52■□□□□ 0.08
SDF4-205ENST00000465727 MAP1LC3AQ9H492 121 aa15.52■□□□□ 0.08
SDF4-205ENST00000465727 FAM215AQ9Y5M1 114 aa15.52■□□□□ 0.08
SDF4-205ENST00000465727 TEX48A0A1B0GUV7 120 aa15.52■□□□□ 0.07
SDF4-205ENST00000465727 NDUFS8O00217 210 aa15.52■□□□□ 0.07
SDF4-205ENST00000465727 LYPD2Q6UXB3 125 aa15.52■□□□□ 0.07
SDF4-205ENST00000465727 CHAC1Q9BUX1 264 aa15.52■□□□□ 0.07
SDF4-205ENST00000465727 SMPXQ9UHP9 88 aa15.52■□□□□ 0.07
SDF4-205ENST00000465727 GPR179Q6PRD1 2367 aa15.51■□□□□ 0.07
SDF4-205ENST00000465727 J3QR89 54 aa15.51■□□□□ 0.07
SDF4-205ENST00000465727 M0R3E3 92 aa15.51■□□□□ 0.07
SDF4-205ENST00000465727 FTH1P19P0C7X4 201 aa15.51■□□□□ 0.07
SDF4-205ENST00000465727 PPIAL4GP0DN37 164 aa15.51■□□□□ 0.07
SDF4-205ENST00000465727 FCGR2BP31994 310 aaPredicted RBP15.51■□□□□ 0.07
SDF4-205ENST00000465727 FXYD2P54710 66 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms