RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 KLRD1Q13241 179 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 HAGHLQ6PII5 290 aaPredicted RBP0.88□□□□□ -2.27
GARNL3-213ENST00000464616 GKN2Q86XP6 184 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 OR5AS1Q8N127 324 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 EXOC3-AS1Q8N2X6 119 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 RAB37Q96AX2 223 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 OBSCN-AS1Q96MR7 158 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 AMELYQ99218 206 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 CCDC32Q9BV29 185 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 MED11Q9P086 117 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 MED13Q9UHV7 2174 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 DOCK4Q8N1I0 1966 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 ARHGEF11O15085 1522 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 ADGBQ8N7X0 1667 aa0.88□□□□□ -2.27
GARNL3-213ENST00000464616 SYNMO15061 1565 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 hDV103S1A0JD37 113 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 E7EQ34 232 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 MFSD11O43934 449 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 ZNF25P17030 456 aaPredicted RBP0.87□□□□□ -2.27
GARNL3-213ENST00000464616 HBBP68871 147 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 FKBP1CQ5VVH2 108 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 DCUN1D2Q6PH85 259 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 PATE2Q6UY27 113 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 ARPINQ7Z6K5 226 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 ANGPTL5Q86XS5 388 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 LRRC18Q8N456 261 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 DYDC1Q8WWB3 177 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 POP5Q969H6 163 aaKnown RBP0.87□□□□□ -2.27
GARNL3-213ENST00000464616 PCBD2Q9H0N5 130 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 TMEM138Q9NPI0 162 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 C22orf24Q9Y442 160 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 LAMB4A4D0S4 1761 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 PIK3C2AO00443 1686 aa0.87□□□□□ -2.27
GARNL3-213ENST00000464616 CEP164Q9UPV0 1460 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 A0A096LPI6 279 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 MAP1LC3B2A6NCE7 125 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 CRYBA4P53673 196 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 ARPP19P56211 112 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 KRTAP10-4P60372 401 aaPredicted RBP0.86□□□□□ -2.27
GARNL3-213ENST00000464616 KRTAP26-1Q6PEX3 210 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 SMIM20Q8N5G0 67 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 FAM216BQ8N7L0 139 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 OR10AC1Q8NH08 325 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 TAS2R7Q9NYW3 318 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 RNF11Q9Y3C5 154 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 SDK1Q7Z5N4 2213 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 NUP210LQ5VU65 1888 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 TRPM1Q7Z4N2 1603 aa0.86□□□□□ -2.27
GARNL3-213ENST00000464616 NISCHQ9Y2I1 1504 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 A0A1W2PPM0 123 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 KPNA4O00629 521 aaPredicted RBP0.85□□□□□ -2.27
GARNL3-213ENST00000464616 NCR3O14931 201 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 DNAL4O96015 105 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 CSN2P05814 226 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 BCL2P10415 239 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 GNG10P50151 68 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 INSL3P51460 131 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 LSM3P62310 102 aaKnown RBP0.85□□□□□ -2.27
GARNL3-213ENST00000464616 TFAMQ00059 246 aaKnown RBP0.85□□□□□ -2.27
GARNL3-213ENST00000464616 PRR15Q8IV56 129 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 OR4B1Q8NGF8 309 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 PSMF1Q92530 271 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 PLXNA4Q9HCM2 1894 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 SS18L2Q9UHA2 77 aa0.85□□□□□ -2.27
GARNL3-213ENST00000464616 PEAK1Q9H792 1746 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 CD109Q6YHK3 1445 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 A0A1B0GV72 72 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 CD2P06729 351 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 CXCL1P09341 107 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 SRP9P49458 86 aaKnown RBP0.84□□□□□ -2.27
GARNL3-213ENST00000464616 EIF3IQ13347 325 aaKnown RBP0.84□□□□□ -2.27
GARNL3-213ENST00000464616 TMEM78Q5T7P6 136 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 C1orf134Q5TEV5 83 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 GRPEL2Q8TAA5 225 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 BORCS8Q96FH0 119 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 HOPXQ9BPY8 73 aaPredicted RBP0.84□□□□□ -2.27
GARNL3-213ENST00000464616 LXNQ9BS40 222 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 SPANXA1Q9NS26 97 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 TPRKBQ9Y3C4 175 aa0.84□□□□□ -2.27
GARNL3-213ENST00000464616 SIP14410 1827 aa0.84□□□□□ -2.28
GARNL3-213ENST00000464616 MYO5AQ9Y4I1 1855 aaKnown RBP0.84□□□□□ -2.28
GARNL3-213ENST00000464616 PTPRFP10586 1907 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 MYH3P11055 1940 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 RTL9Q8NET4 1388 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 MCM3APO60318 1980 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 KIAA1107Q9UPP5 1409 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 IGLV1-51P01701 117 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 IGLV3-1P01715 115 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 IGHV3-33P01772 117 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 GLRXP35754 106 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 LTC4SQ16873 150 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 SPATA45Q537H7 98 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 PPP1R2P3Q6NXS1 205 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 TOMM20LQ6UXN7 152 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 LINC00299Q6ZSB3 139 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 SELENOSQ9BQE4 189 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 EFCAB11Q9BUY7 163 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 CST11Q9H112 138 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 SPANXCQ9NY87 97 aa0.83□□□□□ -2.28
GARNL3-213ENST00000464616 NAT8BQ9UHF3 227 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms