RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ARL5CA6NH57 179 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 GGCTO75223 188 aaKnown RBP1.11□□□□□ -2.23
CLK1-208ENST00000464454 TRGC2P03986 189 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 DYNLT1P63172 113 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 EIF3IQ13347 325 aaKnown RBP1.11□□□□□ -2.23
CLK1-208ENST00000464454 DEFB113Q30KQ7 82 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 C1orf137Q5JT78 98 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 FKBP1CQ5VVH2 108 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 FAM19A2Q8N3H0 131 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 STAG3L4Q8TBR4 150 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 C4orf3Q8WVX3 66 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 TCEAL4Q96EI5 215 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 YPEL2Q96QA6 119 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 PRADC1Q9BSG0 188 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 OTORQ9NRC9 128 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 PCTPQ9UKL6 214 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 PAIP2BQ9ULR5 123 aaKnown RBP1.11□□□□□ -2.23
CLK1-208ENST00000464454 C22orf24Q9Y442 160 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 TECPR2O15040 1411 aa1.11□□□□□ -2.23
CLK1-208ENST00000464454 CD109Q6YHK3 1445 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 TRAPPC8Q9Y2L5 1435 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 TMEM189A5PLL7 270 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 K7EP13 123 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 DBIP07108 87 aaKnown RBP1.1□□□□□ -2.23
CLK1-208ENST00000464454 MPC1LP0DKB6 136 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 NFYBP25208 207 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 OR8B8Q15620 311 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 RTL8BQ17RB0 113 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 BCL2L15Q5TBC7 163 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 PATE2Q6UY27 113 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 Q8N814 137 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 TMEM229BQ8NBD8 167 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 GRPEL2Q8TAA5 225 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 LINC00526Q96FQ7 95 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 LINC00467Q9BRT7 94 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 RNF11Q9Y3C5 154 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 SCN3AQ9NY46 2000 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 NISCHQ9Y2I1 1504 aa1.1□□□□□ -2.23
CLK1-208ENST00000464454 MYH3P11055 1940 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 MYH10P35580 1976 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 TRPM1Q7Z4N2 1603 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 A0A096LPI6 279 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 IGHV1-58A0A0C4DH39 117 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 J3KT08 172 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 TSPAN19P0C672 248 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 HLA-EP13747 358 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 HRCT1Q6UXD1 115 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 OR8J3Q8NGG0 315 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 PPTC7Q8NI37 304 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 NAT14Q8WUY8 206 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 OBSCN-AS1Q96MR7 158 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 SLC25A21Q9BQT8 299 aaPredicted RBP1.09□□□□□ -2.23
CLK1-208ENST00000464454 POPDC3Q9HBV1 291 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 MED11Q9P086 117 aa1.09□□□□□ -2.23
CLK1-208ENST00000464454 ADGBQ8N7X0 1667 aa1.09□□□□□ -2.24
CLK1-208ENST00000464454 MYH2Q9UKX2 1941 aa1.09□□□□□ -2.24
CLK1-208ENST00000464454 NCAPD3P42695 1498 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 CAMSAP2Q08AD1 1489 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 ZNF736B4DX44 427 aaPredicted RBP1.08□□□□□ -2.24
CLK1-208ENST00000464454 TMEM256-PLSCR3K7ERE1 68 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 M0R2N4 97 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 NDUFB3O43676 98 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 TIMM17BO60830 172 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 TNFSF15O95150 251 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 EVI2AP22794 236 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 SDC4P31431 198 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 S100A11P31949 105 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 DYNLT3P51808 116 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 SMIM21Q3B7S5 101 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 CCDC153Q494R4 210 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 CCDC58Q4VC31 144 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 TMEM14EPQ6UXP3 125 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 SOSTDC1Q6X4U4 206 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 TMEM254Q8TBM7 123 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 OR2H1Q9GZK4 316 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 GSKIPQ9P0R6 139 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 NAT8BQ9UHF3 227 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 ZFP30Q9Y2G7 519 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 TNRC6AQ8NDV7 1962 aaKnown RBP1.08□□□□□ -2.24
CLK1-208ENST00000464454 RTL9Q8NET4 1388 aa1.08□□□□□ -2.24
CLK1-208ENST00000464454 A0A087WSZ3 146 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 TRBV27A0A0K0K1C4 114 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 CCDC160A6NGH7 325 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 A8MWV9 139 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 C9JAW5 83 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 CST8O60676 142 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 RPL22P35268 128 aaKnown RBP1.07□□□□□ -2.24
CLK1-208ENST00000464454 CKS1BP61024 79 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 CNBPP62633 177 aaKnown RBP1.07□□□□□ -2.24
CLK1-208ENST00000464454 UBE2BP63146 152 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 QRFPP83859 136 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 TEX261Q6UWH6 196 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 PDZD9Q8IXQ8 264 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 CLECL1Q8IZS7 167 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 LRRC18Q8N456 261 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 CCL4L1Q8NHW4 92 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 DIRC1Q969H9 104 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 BORCS8Q96FH0 119 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 TCEAL2Q9H3H9 227 aaPredicted RBP1.07□□□□□ -2.24
CLK1-208ENST00000464454 TAF9BQ9HBM6 251 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms