RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RPUSD4Q96CM3 377 aaKnown RBP10.83□□□□□ -0.68
SKA3-204ENST00000462482 SMIM8Q96KF7 97 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 UHRF2Q96PU4 802 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 DNAH2Q9P225 4427 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 DNAH17Q9UFH2 4485 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 NAP1L6A6NFF2 107 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 GOSR2O14653 212 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 SCGB1D2O95969 90 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 CXCL2P19875 107 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 AZU1P20160 251 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 CDKN1BP46527 198 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 FCN2Q15485 313 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 TRIQKQ629K1 86 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 ZNF546Q86UE3 836 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 CCDC28AQ8IWP9 274 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 C6orf223Q8N319 242 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 ARV1Q9H2C2 271 aa10.82□□□□□ -0.68
SKA3-204ENST00000462482 C16orf90A8MZG2 172 aa10.81□□□□□ -0.68
SKA3-204ENST00000462482 FNDC10F2Z333 226 aa10.81□□□□□ -0.68
SKA3-204ENST00000462482 H7BYZ3 331 aa10.81□□□□□ -0.68
SKA3-204ENST00000462482 METTL15P1P0C7V9 234 aa10.81□□□□□ -0.68
SKA3-204ENST00000462482 C4orf46Q504U0 113 aa10.81□□□□□ -0.68
SKA3-204ENST00000462482 LCN15Q6UWW0 184 aa10.81□□□□□ -0.68
SKA3-204ENST00000462482 SLC50A1Q9BRV3 221 aa10.81□□□□□ -0.68
SKA3-204ENST00000462482 PMS2P5A8MQ11 134 aa10.8□□□□□ -0.68
SKA3-204ENST00000462482 CENPXA8MT69 81 aa10.8□□□□□ -0.68
SKA3-204ENST00000462482 COX7A2P2O60397 106 aa10.8□□□□□ -0.68
SKA3-204ENST00000462482 BPIFA4PQ86YQ2 179 aa10.8□□□□□ -0.68
SKA3-204ENST00000462482 ZNRF2Q8NHG8 242 aa10.8□□□□□ -0.68
SKA3-204ENST00000462482 TMEM263Q8WUH6 116 aaKnown RBP10.8□□□□□ -0.68
SKA3-204ENST00000462482 C20orf144Q9BQM9 153 aa10.8□□□□□ -0.68
SKA3-204ENST00000462482 NOP10Q9NPE3 64 aaKnown RBP10.8□□□□□ -0.68
SKA3-204ENST00000462482 PLAC8L1A1L4L8 177 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 K7EPK0 472 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 TSC22D2O75157 780 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 NDUFB6O95139 128 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 OR4E1P0C645 316 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 TAS2R30P59541 319 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 TNP2Q05952 138 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 SLC38A11Q08AI6 406 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 OR5I1Q13606 314 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 IAH1Q2TAA2 248 aaPredicted RBP10.79□□□□□ -0.68
SKA3-204ENST00000462482 TMEM14EPQ6UXP3 125 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 LINC00305Q7Z4B0 112 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 CCDC190Q86UF4 302 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 RNF141Q8WVD5 230 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 GSKIPQ9P0R6 139 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 DNAH11Q96DT5 4516 aa10.79□□□□□ -0.68
SKA3-204ENST00000462482 RAB31Q13636 194 aa10.78□□□□□ -0.68
SKA3-204ENST00000462482 TTC32Q5I0X7 151 aa10.78□□□□□ -0.68
SKA3-204ENST00000462482 SSX7Q7RTT5 188 aa10.78□□□□□ -0.68
SKA3-204ENST00000462482 GNPNAT1Q96EK6 184 aaPredicted RBP10.78□□□□□ -0.68
SKA3-204ENST00000462482 GGACTQ9BVM4 153 aa10.78□□□□□ -0.68
SKA3-204ENST00000462482 ZNF331Q9NQX6 463 aaPredicted RBP10.78□□□□□ -0.68
SKA3-204ENST00000462482 LINC00588Q9Y4M8 146 aa10.78□□□□□ -0.68
SKA3-204ENST00000462482 SNURFLB1AK76 121 aa10.77□□□□□ -0.69
SKA3-204ENST00000462482 L7N2F9 121 aa10.77□□□□□ -0.69
SKA3-204ENST00000462482 CCNKO75909 580 aa10.77□□□□□ -0.69
SKA3-204ENST00000462482 RLN2P04090 185 aa10.77□□□□□ -0.69
SKA3-204ENST00000462482 VAMP2P63027 116 aa10.77□□□□□ -0.69
SKA3-204ENST00000462482 PATE2Q6UY27 113 aa10.77□□□□□ -0.69
SKA3-204ENST00000462482 RNASE8Q8TDE3 154 aaKnown RBP10.77□□□□□ -0.69
SKA3-204ENST00000462482 FLVCR2Q9UPI3 526 aa10.77□□□□□ -0.69
SKA3-204ENST00000462482 PXMP4Q9Y6I8 212 aa10.77□□□□□ -0.69
SKA3-204ENST00000462482 LINC00854A0A1B0GVQ3 168 aa10.76□□□□□ -0.69
SKA3-204ENST00000462482 AGPAT2O15120 278 aa10.76□□□□□ -0.69
SKA3-204ENST00000462482 M6PRP20645 277 aa10.76□□□□□ -0.69
SKA3-204ENST00000462482 ZNF846Q147U1 533 aa10.76□□□□□ -0.69
SKA3-204ENST00000462482 C10orf113Q5VZT2 155 aa10.76□□□□□ -0.69
SKA3-204ENST00000462482 Q6ZRG5 221 aa10.76□□□□□ -0.69
SKA3-204ENST00000462482 ZBTB8BQ8NAP8 495 aaPredicted RBP10.76□□□□□ -0.69
SKA3-204ENST00000462482 SRRQ9GZT4 340 aa10.76□□□□□ -0.69
SKA3-204ENST00000462482 Q9H8V8 135 aa10.76□□□□□ -0.69
SKA3-204ENST00000462482 PKHD1P08F94 4074 aa10.75□□□□□ -0.69
SKA3-204ENST00000462482 TRAV26-1A0A087WT03 109 aa10.75□□□□□ -0.69
SKA3-204ENST00000462482 MRPS12O15235 138 aaKnown RBP10.75□□□□□ -0.69
SKA3-204ENST00000462482 CDK2AP2O75956 126 aa10.75□□□□□ -0.69
SKA3-204ENST00000462482 SNRPCP09234 159 aaKnown RBP10.75□□□□□ -0.69
SKA3-204ENST00000462482 PRB4P10163 310 aaPredicted RBP10.75□□□□□ -0.69
SKA3-204ENST00000462482 LEPP41159 167 aa10.75□□□□□ -0.69
SKA3-204ENST00000462482 CNPY1Q3B7I2 92 aa10.75□□□□□ -0.69
SKA3-204ENST00000462482 DYNC1H1Q14204 4646 aaKnown RBP10.74□□□□□ -0.69
SKA3-204ENST00000462482 GAGE12BA1L429 117 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 GAGE7O76087 117 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 GAGE12FP0CL80 117 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 GAGE12GP0CL81 117 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 GAGE12IP0CL82 117 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 CAMLGP49069 296 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 BCAP31P51572 246 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 GUK1Q16774 197 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 GFI1BQ5VTD9 330 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 OR1L4Q8NGR5 311 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 RXFP4Q8TDU9 374 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 ZNF503Q96F45 646 aa10.74□□□□□ -0.69
SKA3-204ENST00000462482 A0A0J9YY99 117 aa10.73□□□□□ -0.69
SKA3-204ENST00000462482 H3BTX0 84 aa10.73□□□□□ -0.69
SKA3-204ENST00000462482 J3KRW8 73 aa10.73□□□□□ -0.69
SKA3-204ENST00000462482 DNAJC4Q9NNZ3 241 aa10.73□□□□□ -0.69
SKA3-204ENST00000462482 RCL1Q9Y2P8 373 aaKnown RBP10.73□□□□□ -0.69
SKA3-204ENST00000462482 PKD1P98161 4303 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms