RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ADIRFQ15847 76 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 SRSF7Q16629 238 aaKnown RBP eCLIP4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 HLA-DRB5Q30154 266 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 GCSAMLQ5JQS6 135 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 UTF1Q5T230 341 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 FAM78BQ5VT40 261 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 FAM53AQ6NSI3 398 aaPredicted RBP4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 Q6ZS49 121 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 C19orf35Q6ZS72 473 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 CENPVQ7Z7K6 275 aaPredicted RBP4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 NDUFA11Q86Y39 141 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 OR1B1Q8NGR6 318 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 VN1R17PQ8TDU5 208 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 RPEQ96AT9 228 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 GPR82Q96P67 336 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 AP1S3Q96PC3 154 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 DPM3Q9P2X0 92 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 VPREB3Q9UKI3 123 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 NSG2Q9Y328 171 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 HILPDAQ9Y5L2 63 aa4.72□□□□□ -1.65
SMARCC1-204ENST00000462198 IGKV1D-8A0A087WSZ0 117 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 PSMB11A5LHX3 300 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 BUB1B-PAK6H3BSN5 160 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 IGLV1-47P01700 117 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 HLA-DRB1P01911 266 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 IL3RAP26951 378 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 ZNF266Q14584 549 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 ZNF585BQ52M93 769 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 MINOS1Q5TGZ0 78 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 OR8I2Q8N0Y5 310 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 C8orf31Q8N9H6 132 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 OR5H2Q8NGV7 314 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 OR2T10Q8NGZ9 312 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 OR2T6Q8NHC8 308 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 ABHD14BQ96IU4 210 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 PMCHL2Q9BQD1 86 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 OR1A1Q9P1Q5 309 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 ZNRD1Q9P1U0 126 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 PEMTQ9UBM1 199 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 ANXA10Q9UJ72 324 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 MINOS1-NBL1R4GNA1 71 aa4.71□□□□□ -1.66
SMARCC1-204ENST00000462198 FRAS1Q86XX4 4008 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 SAA2-SAA4A0A096LPE2 208 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 TRBV9A0A0B4J1U6 114 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 IGKV1-6A0A0C4DH72 117 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 GAGE12HA6NDE8 117 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 OOSP1A8MZH6 123 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 TAX1BP3O14907 124 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 ZNF253O75346 499 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 GALR1P47211 349 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 HINT1P49773 126 aaPredicted RBP4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 TCL1AP56279 114 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 RND3P61587 244 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 RPL32P62910 135 aaKnown RBP4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 HIST1H1AQ02539 215 aaPredicted RBP4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 SMAGPQ0VAQ4 97 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 TMEM187Q14656 261 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 ICAM4Q14773 271 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 MSMO1Q15800 293 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 LRRC75BQ2VPJ9 315 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 TDRG1Q3Y452 100 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 CT45A1Q5HYN5 189 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 UFSP1Q6NVU6 142 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 FOXI2Q6ZQN5 318 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 CYP2G1PQ6ZSU1 146 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 SLC25A48Q6ZT89 311 aaKnown RBP4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 SGPP2Q8IWX5 399 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 LINC00311Q8N616 119 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 ZNF439Q8NDP4 499 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 OR10P1Q8NGE3 313 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 OR51G1Q8NGK1 321 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 CT45A3Q8NHU0 189 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 PTH2Q96A98 100 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 GNPNAT1Q96EK6 184 aaPredicted RBP4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 C5orf30Q96GV9 206 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 GRAMD2BQ96HH9 432 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 RSG1Q9BU20 258 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 DERL1Q9BUN8 251 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 PARLQ9H300 379 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 SDF2L1Q9HCN8 221 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 ERG28Q9UKR5 140 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 PSG8Q9UQ74 426 aa4.7□□□□□ -1.66
SMARCC1-204ENST00000462198 TRAV34A0A0B4J273 112 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 DUXBA0A1W2PPF3 345 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 LY6LH3BQJ8 138 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 H3BUX3 64 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 K7EP34 96 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 RAB29O14966 203 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 PITX3O75364 302 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 SCGB2A1O75556 95 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 TMEM50AO95807 157 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 SAA2P0DJI9 122 aaPredicted RBP4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 PI3P19957 117 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 REG1BP48304 166 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 CCL20P78556 96 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 Q0VG73 95 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 DIAPH2-AS1Q14236 149 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 LY6EQ16553 131 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 AMMECR1LQ6DCA0 310 aa4.69□□□□□ -1.66
SMARCC1-204ENST00000462198 Q6ZWC4 215 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms