RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 SCNM1Q9BWG6 230 aa14.57□□□□□ -0.08
HPS3-204ENST00000462030 IGLV1-47P01700 117 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 FGF6P10767 208 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 TCTAP57738 103 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 IGFL3Q6UXB1 125 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 FAM57AQ8TBR7 257 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 PEF1Q9UBV8 284 aaKnown RBP14.56□□□□□ -0.08
HPS3-204ENST00000462030 A0A0G2JNJ9 132 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 H3BRN7 92 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 UQCRFS1P47985 274 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 ZGRF1Q86YA3 2104 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 ARL6IP6Q8N6S5 226 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 KAAG1Q9UBP8 84 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 Q9UFV3 132 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 DMXL1Q9Y485 3027 aa14.56□□□□□ -0.08
HPS3-204ENST00000462030 TMSB15BA0A087X1C1 80 aa14.55□□□□□ -0.08
HPS3-204ENST00000462030 GAGE12BA1L429 117 aa14.55□□□□□ -0.08
HPS3-204ENST00000462030 D6R8Y8 96 aa14.55□□□□□ -0.08
HPS3-204ENST00000462030 FXYD7P58549 80 aa14.55□□□□□ -0.08
HPS3-204ENST00000462030 TMEM97Q5BJF2 176 aa14.55□□□□□ -0.08
HPS3-204ENST00000462030 RNASE6Q93091 150 aaKnown RBP14.55□□□□□ -0.08
HPS3-204ENST00000462030 SERTM2A0A1B0GWG4 89 aa14.55□□□□□ -0.08
HPS3-204ENST00000462030 TMEM213A2RRL7 107 aa14.55□□□□□ -0.08
HPS3-204ENST00000462030 SIGLEC8Q9NYZ4 499 aa14.55□□□□□ -0.08
HPS3-204ENST00000462030 A0A1B0GW15 77 aa14.54□□□□□ -0.08
HPS3-204ENST00000462030 BUB1B-PAK6H3BSN5 160 aa14.54□□□□□ -0.08
HPS3-204ENST00000462030 K7EIM0 57 aa14.54□□□□□ -0.08
HPS3-204ENST00000462030 K7EQM0 130 aa14.54□□□□□ -0.08
HPS3-204ENST00000462030 COX7A1P24310 79 aa14.54□□□□□ -0.08
HPS3-204ENST00000462030 AMN1Q8IY45 258 aa14.54□□□□□ -0.08
HPS3-204ENST00000462030 BCL6BQ8N143 479 aaPredicted RBP14.54□□□□□ -0.08
HPS3-204ENST00000462030 S4R3C0 116 aa14.54□□□□□ -0.08
HPS3-204ENST00000462030 OTOGLQ3ZCN5 2332 aa14.53□□□□□ -0.08
HPS3-204ENST00000462030 PLGLAQ15195 96 aa14.53□□□□□ -0.08
HPS3-204ENST00000462030 LYZL1Q6UWQ5 148 aa14.53□□□□□ -0.08
HPS3-204ENST00000462030 ZNF493Q6ZR52 646 aa14.53□□□□□ -0.08
HPS3-204ENST00000462030 ZNF414Q96IQ9 312 aa14.53□□□□□ -0.08
HPS3-204ENST00000462030 DYNLRB1Q9NP97 96 aa14.53□□□□□ -0.08
HPS3-204ENST00000462030 RABAC1Q9UI14 185 aa14.53□□□□□ -0.08
HPS3-204ENST00000462030 MRPS12O15235 138 aaKnown RBP14.53□□□□□ -0.08
HPS3-204ENST00000462030 APOBEC3AP31941 199 aaPredicted RBP14.53□□□□□ -0.08
HPS3-204ENST00000462030 NHLH1Q02575 133 aa14.53□□□□□ -0.08
HPS3-204ENST00000462030 ZNF491Q8N8L2 437 aa14.53□□□□□ -0.08
HPS3-204ENST00000462030 SELENOKQ9Y6D0 94 aa14.53□□□□□ -0.08
HPS3-204ENST00000462030 IL4P05112 153 aa14.52□□□□□ -0.08
HPS3-204ENST00000462030 TNFRSF14Q92956 283 aa14.52□□□□□ -0.08
HPS3-204ENST00000462030 SH3BGRL2Q9UJC5 107 aa14.52□□□□□ -0.08
HPS3-204ENST00000462030 FCGR2BP31994 310 aaPredicted RBP14.52□□□□□ -0.09
HPS3-204ENST00000462030 CACNG7P62955 275 aa14.52□□□□□ -0.09
HPS3-204ENST00000462030 SEC11AP67812 179 aa14.52□□□□□ -0.09
HPS3-204ENST00000462030 Q6AWC8 147 aa14.52□□□□□ -0.09
HPS3-204ENST00000462030 RNF125Q96EQ8 232 aa14.52□□□□□ -0.09
HPS3-204ENST00000462030 PRELID3AQ96N28 172 aa14.52□□□□□ -0.09
HPS3-204ENST00000462030 CNIH1O95406 144 aa14.51□□□□□ -0.09
HPS3-204ENST00000462030 LYPD1Q8N2G4 141 aa14.51□□□□□ -0.09
HPS3-204ENST00000462030 JMJD8Q96S16 334 aa14.51□□□□□ -0.09
HPS3-204ENST00000462030 BSNQ9UPA5 3926 aa14.51□□□□□ -0.09
HPS3-204ENST00000462030 A0A1W2PRD5 423 aa14.5□□□□□ -0.09
HPS3-204ENST00000462030 A0A1W2PRF3 423 aa14.5□□□□□ -0.09
HPS3-204ENST00000462030 A0A1W2PRM7 423 aa14.5□□□□□ -0.09
HPS3-204ENST00000462030 CT45A10P0DMU9 189 aa14.5□□□□□ -0.09
HPS3-204ENST00000462030 FAM104BQ5XKR9 115 aa14.5□□□□□ -0.09
HPS3-204ENST00000462030 RPEQ96AT9 228 aa14.5□□□□□ -0.09
HPS3-204ENST00000462030 NAA38Q9BRA0 125 aaKnown RBP14.5□□□□□ -0.09
HPS3-204ENST00000462030 U3KQK5 164 aa14.5□□□□□ -0.09
HPS3-204ENST00000462030 LYNX1G3V0Z9 82 aa14.5□□□□□ -0.09
HPS3-204ENST00000462030 LYNX1P0DP58 116 aa14.5□□□□□ -0.09
HPS3-204ENST00000462030 KLF17Q5JT82 389 aaPredicted RBP14.5□□□□□ -0.09
HPS3-204ENST00000462030 IGFBPL1Q8WX77 278 aa14.5□□□□□ -0.09
HPS3-204ENST00000462030 HILPDAQ9Y5L2 63 aa14.5□□□□□ -0.09
HPS3-204ENST00000462030 GAGE10A6NGK3 116 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 LGALS9BQ3B8N2 356 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 LGALS9CQ6DKI2 356 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 DPF1Q92782 380 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 RALYQ9UKM9 306 aaKnown RBP14.49□□□□□ -0.09
HPS3-204ENST00000462030 TACC2O95359 2948 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 TMEM189A5PLL7 270 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 E7EQL1 145 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 SMKR1H3BMG3 65 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 SH2D1AO60880 128 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 MRPL51Q4U2R6 128 aaKnown RBP14.49□□□□□ -0.09
HPS3-204ENST00000462030 BOD1L2Q8IYS8 172 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 ORMDL3Q8N138 153 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 THYN1Q9P016 225 aa14.49□□□□□ -0.09
HPS3-204ENST00000462030 SAP30O75446 220 aa14.48□□□□□ -0.09
HPS3-204ENST00000462030 TPRP12270 2363 aaKnown RBP14.48□□□□□ -0.09
HPS3-204ENST00000462030 UFSP1Q6NVU6 142 aa14.48□□□□□ -0.09
HPS3-204ENST00000462030 CSMD1Q96PZ7 3565 aa14.47□□□□□ -0.09
HPS3-204ENST00000462030 SHISA9B4DS77 424 aa14.47□□□□□ -0.09
HPS3-204ENST00000462030 SMAD7O15105 426 aaKnown RBP14.47□□□□□ -0.09
HPS3-204ENST00000462030 PAX8Q06710 450 aa14.47□□□□□ -0.09
HPS3-204ENST00000462030 OR1N2Q8NGR9 330 aa14.47□□□□□ -0.09
HPS3-204ENST00000462030 IGKV2-40A0A087WW87 121 aaPredicted RBP14.47□□□□□ -0.09
HPS3-204ENST00000462030 WI2-2373I1.2A0A1W2PRP0 233 aa14.47□□□□□ -0.09
HPS3-204ENST00000462030 C9orf118A6NHY6 69 aa14.47□□□□□ -0.09
HPS3-204ENST00000462030 K7ERU9 68 aa14.47□□□□□ -0.09
HPS3-204ENST00000462030 IGKV2D-40P01614 121 aaPredicted RBP14.47□□□□□ -0.09
HPS3-204ENST00000462030 HBDP02042 147 aa14.47□□□□□ -0.09
HPS3-204ENST00000462030 SMIM15Q7Z3B0 74 aa14.47□□□□□ -0.09
HPS3-204ENST00000462030 H3BRM9 83 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms