RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 BPIFA4PQ86YQ2 179 aa16.29■□□□□ 0.2
TRAF4-207ENST00000461195 RNF182Q8N6D2 247 aa16.29■□□□□ 0.2
TRAF4-207ENST00000461195 ZNF709Q8N972 641 aa16.29■□□□□ 0.2
TRAF4-207ENST00000461195 LRRC20Q8TCA0 184 aa16.29■□□□□ 0.2
TRAF4-207ENST00000461195 PPP1R1CQ8WVI7 109 aa16.29■□□□□ 0.2
TRAF4-207ENST00000461195 B2MP61769 119 aa16.28■□□□□ 0.2
TRAF4-207ENST00000461195 ZNF738Q8NE65 137 aa16.28■□□□□ 0.2
TRAF4-207ENST00000461195 OR5C1Q8NGR4 320 aa16.28■□□□□ 0.2
TRAF4-207ENST00000461195 PHLDA1Q8WV24 401 aaPredicted RBP16.28■□□□□ 0.2
TRAF4-207ENST00000461195 PFDN5Q99471 154 aa16.28■□□□□ 0.2
TRAF4-207ENST00000461195 SLC35B3Q9H1N7 401 aa16.28■□□□□ 0.2
TRAF4-207ENST00000461195 SLC39A9Q9NUM3 307 aa16.28■□□□□ 0.2
TRAF4-207ENST00000461195 KLK5Q9Y337 293 aaPredicted RBP16.28■□□□□ 0.2
TRAF4-207ENST00000461195 A8MTW9 85 aa16.27■□□□□ 0.2
TRAF4-207ENST00000461195 DUSP14O95147 198 aaKnown RBP16.27■□□□□ 0.2
TRAF4-207ENST00000461195 PTTG1O95997 202 aa16.27■□□□□ 0.2
TRAF4-207ENST00000461195 CXCL2P19875 107 aa16.27■□□□□ 0.2
TRAF4-207ENST00000461195 MORN5Q5VZ52 161 aa16.27■□□□□ 0.2
TRAF4-207ENST00000461195 PXMP4Q9Y6I8 212 aa16.27■□□□□ 0.2
TRAF4-207ENST00000461195 PET100P0DJ07 73 aa16.26■□□□□ 0.19
TRAF4-207ENST00000461195 CXCL3P19876 107 aa16.26■□□□□ 0.19
TRAF4-207ENST00000461195 LCN15Q6UWW0 184 aa16.26■□□□□ 0.19
TRAF4-207ENST00000461195 ZNF705AQ6ZN79 300 aaPredicted RBP16.26■□□□□ 0.19
TRAF4-207ENST00000461195 HRH4Q9H3N8 390 aa16.26■□□□□ 0.19
TRAF4-207ENST00000461195 MPC2O95563 127 aa16.25■□□□□ 0.19
TRAF4-207ENST00000461195 CNN1P51911 297 aaKnown RBP16.25■□□□□ 0.19
TRAF4-207ENST00000461195 PSG3Q16557 428 aa16.25■□□□□ 0.19
TRAF4-207ENST00000461195 RNF126Q9BV68 326 aa16.25■□□□□ 0.19
TRAF4-207ENST00000461195 NPCDR1Q9BY65 106 aa16.25■□□□□ 0.19
TRAF4-207ENST00000461195 HLA-DMBP28068 263 aa16.24■□□□□ 0.19
TRAF4-207ENST00000461195 CLINT1Q14677 625 aa16.24■□□□□ 0.19
TRAF4-207ENST00000461195 AMTNQ6UX39 209 aa16.24■□□□□ 0.19
TRAF4-207ENST00000461195 THAP6Q8TBB0 222 aa16.24■□□□□ 0.19
TRAF4-207ENST00000461195 NEU1Q99519 415 aa16.24■□□□□ 0.19
TRAF4-207ENST00000461195 SLC50A1Q9BRV3 221 aa16.24■□□□□ 0.19
TRAF4-207ENST00000461195 ZNF331Q9NQX6 463 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-207ENST00000461195 ALG5Q9Y673 324 aa16.24■□□□□ 0.19
TRAF4-207ENST00000461195 ZNF705FA8MVS1 300 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-207ENST00000461195 SNRPCP09234 159 aaKnown RBP16.23■□□□□ 0.19
TRAF4-207ENST00000461195 ZNF705DP0CH99 300 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-207ENST00000461195 ZNF705BP0CI00 300 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-207ENST00000461195 GOLT1BQ9Y3E0 138 aa16.23■□□□□ 0.19
TRAF4-207ENST00000461195 IGHV3OR16-12A0A075B7B8 117 aa16.22■□□□□ 0.19
TRAF4-207ENST00000461195 TRAV5A0A0B4J249 113 aa16.22■□□□□ 0.19
TRAF4-207ENST00000461195 SMIM9A6NGZ8 99 aa16.22■□□□□ 0.19
TRAF4-207ENST00000461195 IGLC2P0DOY2 106 aa16.22■□□□□ 0.19
TRAF4-207ENST00000461195 OR11H7Q8NGC8 314 aa16.22■□□□□ 0.19
TRAF4-207ENST00000461195 OR8A1Q8NGG7 326 aa16.22■□□□□ 0.19
TRAF4-207ENST00000461195 HYDINQ4G0P3 5121 aa16.22■□□□□ 0.19
TRAF4-207ENST00000461195 PLECQ15149 4684 aaKnown RBP16.21■□□□□ 0.19
TRAF4-207ENST00000461195 AMBPP02760 352 aa16.21■□□□□ 0.19
TRAF4-207ENST00000461195 RPUSD4Q96CM3 377 aaKnown RBP16.21■□□□□ 0.19
TRAF4-207ENST00000461195 H3BQ15 152 aa16.2■□□□□ 0.18
TRAF4-207ENST00000461195 H3BTX0 84 aa16.2■□□□□ 0.18
TRAF4-207ENST00000461195 HIST1H1AQ02539 215 aaPredicted RBP16.2■□□□□ 0.18
TRAF4-207ENST00000461195 GUK1Q16774 197 aa16.2■□□□□ 0.18
TRAF4-207ENST00000461195 IGF2BP2-AS1Q96M15 143 aa16.2■□□□□ 0.18
TRAF4-207ENST00000461195 WDR61Q9GZS3 305 aaKnown RBP16.2■□□□□ 0.18
TRAF4-207ENST00000461195 KCNIP2Q9NS61 270 aa16.2■□□□□ 0.18
TRAF4-207ENST00000461195 MBD2Q9UBB5 411 aa16.2■□□□□ 0.18
TRAF4-207ENST00000461195 HSPB11Q9Y547 144 aa16.2■□□□□ 0.18
TRAF4-207ENST00000461195 SLC17A3O00476 420 aa16.19■□□□□ 0.18
TRAF4-207ENST00000461195 RPL12P30050 165 aaKnown RBP16.19■□□□□ 0.18
TRAF4-207ENST00000461195 SPINK13Q1W4C9 94 aa16.19■□□□□ 0.18
TRAF4-207ENST00000461195 C1orf158Q8N1D5 194 aa16.19■□□□□ 0.18
TRAF4-207ENST00000461195 ATP5SQ99766 215 aa16.19■□□□□ 0.18
TRAF4-207ENST00000461195 RFNGQ9Y644 331 aa16.19■□□□□ 0.18
TRAF4-207ENST00000461195 TMEM189A5PLL7 270 aa16.18■□□□□ 0.18
TRAF4-207ENST00000461195 C11orf94C9JXX5 98 aa16.18■□□□□ 0.18
TRAF4-207ENST00000461195 M0R2Z0 102 aa16.18■□□□□ 0.18
TRAF4-207ENST00000461195 RHOBP62745 196 aa16.18■□□□□ 0.18
TRAF4-207ENST00000461195 GCSAMLQ5JQS6 135 aa16.18■□□□□ 0.18
TRAF4-207ENST00000461195 SAT2Q96F10 170 aaPredicted RBP16.18■□□□□ 0.18
TRAF4-207ENST00000461195 PPP1R14DQ9NXH3 145 aa16.18■□□□□ 0.18
TRAF4-207ENST00000461195 C17orf112F2Z3M2 114 aa16.17■□□□□ 0.18
TRAF4-207ENST00000461195 BOLA2-SMG1P6H3BVE0 249 aa16.17■□□□□ 0.18
TRAF4-207ENST00000461195 LINC00476Q8WZB0 136 aa16.17■□□□□ 0.18
TRAF4-207ENST00000461195 ZNF586Q9NXT0 402 aa16.17■□□□□ 0.18
TRAF4-207ENST00000461195 TMEM14CQ9P0S9 112 aa16.17■□□□□ 0.18
TRAF4-207ENST00000461195 CELA1Q9UNI1 258 aa16.17■□□□□ 0.18
TRAF4-207ENST00000461195 ALMS1Q8TCU4 4167 aa16.16■□□□□ 0.18
TRAF4-207ENST00000461195 INSP01308 110 aa16.16■□□□□ 0.18
TRAF4-207ENST00000461195 HBE1P02100 147 aa16.16■□□□□ 0.18
TRAF4-207ENST00000461195 Q6ZTC4 211 aa16.16■□□□□ 0.18
TRAF4-207ENST00000461195 C2CD4CQ8TF44 421 aa16.16■□□□□ 0.18
TRAF4-207ENST00000461195 TMEM208Q9BTX3 173 aa16.16■□□□□ 0.18
TRAF4-207ENST00000461195 MED28Q9H204 178 aa16.16■□□□□ 0.18
TRAF4-207ENST00000461195 CRXO43186 299 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-207ENST00000461195 ZNF253O75346 499 aa16.15■□□□□ 0.18
TRAF4-207ENST00000461195 PRB4P10163 310 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-207ENST00000461195 EMP1P54849 157 aa16.15■□□□□ 0.18
TRAF4-207ENST00000461195 SMIM3Q9BZL3 60 aa16.15■□□□□ 0.18
TRAF4-207ENST00000461195 TRBV19A0A075B6N1 114 aa16.14■□□□□ 0.17
TRAF4-207ENST00000461195 LY6G6CO95867 125 aa16.14■□□□□ 0.17
TRAF4-207ENST00000461195 IFNA5P01569 189 aa16.14■□□□□ 0.17
TRAF4-207ENST00000461195 HIST1H1EP10412 219 aaKnown RBP16.14■□□□□ 0.17
TRAF4-207ENST00000461195 FCN2Q15485 313 aa16.14■□□□□ 0.17
TRAF4-207ENST00000461195 RRN3P1Q2M238 152 aa16.14■□□□□ 0.17
TRAF4-207ENST00000461195 C12orf74Q32Q52 190 aa16.14■□□□□ 0.17
TRAF4-207ENST00000461195 BAP18Q8IXM2 172 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms