RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 MIC13Q5XKP0 118 aa13.3□□□□□ -0.28
COL9A2-205ENST00000461118 ZNF709Q8N972 641 aa13.3□□□□□ -0.28
COL9A2-205ENST00000461118 C11orf45Q8TAV5 145 aa13.3□□□□□ -0.28
COL9A2-205ENST00000461118 PPP1R1CQ8WVI7 109 aa13.3□□□□□ -0.28
COL9A2-205ENST00000461118 KLK5Q9Y337 293 aaPredicted RBP13.3□□□□□ -0.28
COL9A2-205ENST00000461118 IGHV4-28A0A0C4DH34 117 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 PTTG1O95997 202 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 IGKV3-20P01619 116 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 RBMY1A1P0DJD3 496 aaKnown RBP13.29□□□□□ -0.28
COL9A2-205ENST00000461118 RBMY1CP0DJD4 496 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 PSG9Q00887 426 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 BAXQ07812 192 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 FGL1Q08830 312 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 OPCMLQ14982 345 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 RBMY1FQ15415 496 aaKnown RBP13.29□□□□□ -0.28
COL9A2-205ENST00000461118 BPIFA4PQ86YQ2 179 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 OR4B1Q8NGF8 309 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 OR5C1Q8NGR4 320 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 OR1L4Q8NGR5 311 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 RNF126Q9BV68 326 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 MFFQ9GZY8 342 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 HRH4Q9H3N8 390 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 SLC39A9Q9NUM3 307 aa13.29□□□□□ -0.28
COL9A2-205ENST00000461118 DEFB4AO15263 64 aa13.28□□□□□ -0.28
COL9A2-205ENST00000461118 MPC2O95563 127 aa13.28□□□□□ -0.28
COL9A2-205ENST00000461118 CXCL2P19875 107 aa13.28□□□□□ -0.28
COL9A2-205ENST00000461118 CXCL3P19876 107 aa13.28□□□□□ -0.28
COL9A2-205ENST00000461118 IGFL4Q6B9Z1 124 aa13.28□□□□□ -0.28
COL9A2-205ENST00000461118 ZNF705AQ6ZN79 300 aaPredicted RBP13.28□□□□□ -0.28
COL9A2-205ENST00000461118 RNF182Q8N6D2 247 aa13.28□□□□□ -0.28
COL9A2-205ENST00000461118 PHLDA1Q8WV24 401 aaPredicted RBP13.28□□□□□ -0.28
COL9A2-205ENST00000461118 PFDN5Q99471 154 aa13.28□□□□□ -0.28
COL9A2-205ENST00000461118 NEU1Q99519 415 aa13.28□□□□□ -0.28
COL9A2-205ENST00000461118 FGF7P21781 194 aa13.27□□□□□ -0.29
COL9A2-205ENST00000461118 B2MP61769 119 aa13.27□□□□□ -0.29
COL9A2-205ENST00000461118 PSG3Q16557 428 aa13.27□□□□□ -0.29
COL9A2-205ENST00000461118 MORN5Q5VZ52 161 aa13.27□□□□□ -0.29
COL9A2-205ENST00000461118 SLC35B3Q9H1N7 401 aa13.27□□□□□ -0.29
COL9A2-205ENST00000461118 ZNF705FA8MVS1 300 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-205ENST00000461118 DUSP14O95147 198 aaKnown RBP13.26□□□□□ -0.29
COL9A2-205ENST00000461118 ZNF705DP0CH99 300 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-205ENST00000461118 ZNF705BP0CI00 300 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-205ENST00000461118 PET100P0DJ07 73 aa13.26□□□□□ -0.29
COL9A2-205ENST00000461118 NANOS2P60321 138 aaKnown RBP13.26□□□□□ -0.29
COL9A2-205ENST00000461118 LCN15Q6UWW0 184 aa13.26□□□□□ -0.29
COL9A2-205ENST00000461118 AMTNQ6UX39 209 aa13.26□□□□□ -0.29
COL9A2-205ENST00000461118 LRRC20Q8TCA0 184 aa13.26□□□□□ -0.29
COL9A2-205ENST00000461118 NPCDR1Q9BY65 106 aa13.26□□□□□ -0.29
COL9A2-205ENST00000461118 PXMP4Q9Y6I8 212 aa13.26□□□□□ -0.29
COL9A2-205ENST00000461118 SMIM9A6NGZ8 99 aa13.25□□□□□ -0.29
COL9A2-205ENST00000461118 IGLC2P0DOY2 106 aa13.25□□□□□ -0.29
COL9A2-205ENST00000461118 CNN1P51911 297 aaKnown RBP13.25□□□□□ -0.29
COL9A2-205ENST00000461118 FXYD7P58549 80 aa13.25□□□□□ -0.29
COL9A2-205ENST00000461118 ZNF738Q8NE65 137 aa13.25□□□□□ -0.29
COL9A2-205ENST00000461118 SLC50A1Q9BRV3 221 aa13.25□□□□□ -0.29
COL9A2-205ENST00000461118 ZNF331Q9NQX6 463 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-205ENST00000461118 ALG5Q9Y673 324 aa13.25□□□□□ -0.29
COL9A2-205ENST00000461118 FAT2Q9NYQ8 4349 aa13.23□□□□□ -0.29
COL9A2-205ENST00000461118 TRAV5A0A0B4J249 113 aa13.23□□□□□ -0.29
COL9A2-205ENST00000461118 H3BQ15 152 aa13.23□□□□□ -0.29
COL9A2-205ENST00000461118 AMBPP02760 352 aa13.23□□□□□ -0.29
COL9A2-205ENST00000461118 HLA-DMBP28068 263 aa13.23□□□□□ -0.29
COL9A2-205ENST00000461118 CLINT1Q14677 625 aa13.23□□□□□ -0.29
COL9A2-205ENST00000461118 GUK1Q16774 197 aa13.23□□□□□ -0.29
COL9A2-205ENST00000461118 OR11H7Q8NGC8 314 aa13.23□□□□□ -0.29
COL9A2-205ENST00000461118 OR8A1Q8NGG7 326 aa13.23□□□□□ -0.29
COL9A2-205ENST00000461118 THAP6Q8TBB0 222 aa13.23□□□□□ -0.29
COL9A2-205ENST00000461118 SAT2Q96F10 170 aaPredicted RBP13.23□□□□□ -0.29
COL9A2-205ENST00000461118 WDR61Q9GZS3 305 aaKnown RBP13.23□□□□□ -0.29
COL9A2-205ENST00000461118 C1orf158Q8N1D5 194 aa13.22□□□□□ -0.29
COL9A2-205ENST00000461118 RPUSD4Q96CM3 377 aaKnown RBP13.22□□□□□ -0.29
COL9A2-205ENST00000461118 IGF2BP2-AS1Q96M15 143 aa13.22□□□□□ -0.29
COL9A2-205ENST00000461118 TMEM14CQ9P0S9 112 aa13.22□□□□□ -0.29
COL9A2-205ENST00000461118 HSPB11Q9Y547 144 aa13.22□□□□□ -0.29
COL9A2-205ENST00000461118 RPL12P30050 165 aaKnown RBP13.21□□□□□ -0.29
COL9A2-205ENST00000461118 ATP5SQ99766 215 aa13.21□□□□□ -0.29
COL9A2-205ENST00000461118 KCNIP2Q9NS61 270 aa13.21□□□□□ -0.29
COL9A2-205ENST00000461118 GOLT1BQ9Y3E0 138 aa13.21□□□□□ -0.29
COL9A2-205ENST00000461118 DNAH2Q9P225 4427 aa13.2□□□□□ -0.3
COL9A2-205ENST00000461118 TMEM189A5PLL7 270 aa13.2□□□□□ -0.3
COL9A2-205ENST00000461118 C11orf94C9JXX5 98 aa13.2□□□□□ -0.3
COL9A2-205ENST00000461118 SLC17A3O00476 420 aa13.2□□□□□ -0.3
COL9A2-205ENST00000461118 ZNF253O75346 499 aa13.2□□□□□ -0.3
COL9A2-205ENST00000461118 SNRPCP09234 159 aaKnown RBP13.2□□□□□ -0.3
COL9A2-205ENST00000461118 GCSAMLQ5JQS6 135 aa13.2□□□□□ -0.3
COL9A2-205ENST00000461118 ZNF586Q9NXT0 402 aa13.2□□□□□ -0.3
COL9A2-205ENST00000461118 MBD2Q9UBB5 411 aa13.2□□□□□ -0.3
COL9A2-205ENST00000461118 RFNGQ9Y644 331 aa13.2□□□□□ -0.3
COL9A2-205ENST00000461118 DNAH17Q9UFH2 4485 aa13.19□□□□□ -0.3
COL9A2-205ENST00000461118 PKHD1P08F94 4074 aa13.19□□□□□ -0.3
COL9A2-205ENST00000461118 CRXO43186 299 aaPredicted RBP13.19□□□□□ -0.3
COL9A2-205ENST00000461118 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
COL9A2-205ENST00000461118 IGHV3OR16-12A0A075B7B8 117 aa13.18□□□□□ -0.3
COL9A2-205ENST00000461118 C17orf112F2Z3M2 114 aa13.18□□□□□ -0.3
COL9A2-205ENST00000461118 H3BTX0 84 aa13.18□□□□□ -0.3
COL9A2-205ENST00000461118 M0R2Z0 102 aa13.18□□□□□ -0.3
COL9A2-205ENST00000461118 HIST1H1EP10412 219 aaKnown RBP13.18□□□□□ -0.3
COL9A2-205ENST00000461118 SPINK13Q1W4C9 94 aa13.18□□□□□ -0.3
COL9A2-205ENST00000461118 MED28Q9H204 178 aa13.18□□□□□ -0.3
COL9A2-205ENST00000461118 CELA1Q9UNI1 258 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms