RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 HSPB11Q9Y547 144 aa11.95□□□□□ -0.5
SMARCD3-204ENST00000460431 RPL12P30050 165 aaKnown RBP11.94□□□□□ -0.5
SMARCD3-204ENST00000460431 FCN2Q15485 313 aa11.94□□□□□ -0.5
SMARCD3-204ENST00000460431 ZNF709Q8N972 641 aa11.94□□□□□ -0.5
SMARCD3-204ENST00000460431 OR11H7Q8NGC8 314 aa11.94□□□□□ -0.5
SMARCD3-204ENST00000460431 LRRC20Q8TCA0 184 aa11.94□□□□□ -0.5
SMARCD3-204ENST00000460431 WDR61Q9GZS3 305 aaKnown RBP11.94□□□□□ -0.5
SMARCD3-204ENST00000460431 X6R8D5 127 aa11.94□□□□□ -0.5
SMARCD3-204ENST00000460431 DNAH1Q9P2D7 4330 aa11.94□□□□□ -0.5
SMARCD3-204ENST00000460431 TRAV5A0A0B4J249 113 aa11.93□□□□□ -0.5
SMARCD3-204ENST00000460431 IGLC2P0DOY2 106 aa11.93□□□□□ -0.5
SMARCD3-204ENST00000460431 MIFP14174 115 aa11.93□□□□□ -0.5
SMARCD3-204ENST00000460431 CXCL2P19875 107 aa11.93□□□□□ -0.5
SMARCD3-204ENST00000460431 PSG9Q00887 426 aa11.93□□□□□ -0.5
SMARCD3-204ENST00000460431 PSG3Q16557 428 aa11.93□□□□□ -0.5
SMARCD3-204ENST00000460431 RGS21Q2M5E4 152 aa11.93□□□□□ -0.5
SMARCD3-204ENST00000460431 LCN15Q6UWW0 184 aa11.93□□□□□ -0.5
SMARCD3-204ENST00000460431 Q8NAQ8 132 aa11.93□□□□□ -0.5
SMARCD3-204ENST00000460431 ATP5SQ99766 215 aa11.93□□□□□ -0.5
SMARCD3-204ENST00000460431 HRH4Q9H3N8 390 aa11.93□□□□□ -0.5
SMARCD3-204ENST00000460431 HLA-DMBP28068 263 aa11.92□□□□□ -0.5
SMARCD3-204ENST00000460431 FXYD7P58549 80 aa11.92□□□□□ -0.5
SMARCD3-204ENST00000460431 SLC50A1Q9BRV3 221 aa11.92□□□□□ -0.5
SMARCD3-204ENST00000460431 SLC35B3Q9H1N7 401 aa11.92□□□□□ -0.5
SMARCD3-204ENST00000460431 ZNF331Q9NQX6 463 aaPredicted RBP11.92□□□□□ -0.5
SMARCD3-204ENST00000460431 H3BQ15 152 aa11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 DEFB4AO15263 64 aa11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 DUSP14O95147 198 aaKnown RBP11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 RBMY1A1P0DJD3 496 aaKnown RBP11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 RBMY1CP0DJD4 496 aa11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 RBMY1FQ15415 496 aaKnown RBP11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 GCSAMLQ5JQS6 135 aa11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 AMTNQ6UX39 209 aa11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 ZNF705AQ6ZN79 300 aaPredicted RBP11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 ZNF738Q8NE65 137 aa11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 SAT2Q96F10 170 aaPredicted RBP11.91□□□□□ -0.5
SMARCD3-204ENST00000460431 IGHV4-28A0A0C4DH34 117 aa11.9□□□□□ -0.5
SMARCD3-204ENST00000460431 CNN1P51911 297 aaKnown RBP11.9□□□□□ -0.5
SMARCD3-204ENST00000460431 OXA1LQ15070 435 aa11.9□□□□□ -0.5
SMARCD3-204ENST00000460431 GUK1Q16774 197 aa11.9□□□□□ -0.5
SMARCD3-204ENST00000460431 KCNIP2Q9NS61 270 aa11.9□□□□□ -0.5
SMARCD3-204ENST00000460431 TMEM14CQ9P0S9 112 aa11.9□□□□□ -0.5
SMARCD3-204ENST00000460431 CXorf65A6NEN9 183 aa11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 C17orf112F2Z3M2 114 aa11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 ZNF705DP0CH99 300 aaPredicted RBP11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 ZNF705BP0CI00 300 aaPredicted RBP11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 OR8A1Q8NGG7 326 aa11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 C11orf45Q8TAV5 145 aa11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 ASB13Q8WXK3 278 aa11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 NEU1Q99519 415 aa11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 SMIM3Q9BZL3 60 aa11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 MFFQ9GZY8 342 aa11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 WFDC1Q9HC57 220 aa11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 ZNF586Q9NXT0 402 aa11.89□□□□□ -0.51
SMARCD3-204ENST00000460431 ZNF705FA8MVS1 300 aaPredicted RBP11.88□□□□□ -0.51
SMARCD3-204ENST00000460431 H3BTX0 84 aa11.88□□□□□ -0.51
SMARCD3-204ENST00000460431 SLC17A3O00476 420 aa11.88□□□□□ -0.51
SMARCD3-204ENST00000460431 IFNA5P01569 189 aa11.88□□□□□ -0.51
SMARCD3-204ENST00000460431 GIPP09681 153 aaPredicted RBP11.88□□□□□ -0.51
SMARCD3-204ENST00000460431 PMS2P11Q13670 270 aa11.88□□□□□ -0.51
SMARCD3-204ENST00000460431 SCGB1C1Q8TD33 95 aa11.88□□□□□ -0.51
SMARCD3-204ENST00000460431 RPUSD4Q96CM3 377 aaKnown RBP11.88□□□□□ -0.51
SMARCD3-204ENST00000460431 PARD6GQ9BYG4 376 aaPredicted RBP11.88□□□□□ -0.51
SMARCD3-204ENST00000460431 NUPR2A6NF83 97 aa11.87□□□□□ -0.51
SMARCD3-204ENST00000460431 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
SMARCD3-204ENST00000460431 ZNF253O75346 499 aa11.87□□□□□ -0.51
SMARCD3-204ENST00000460431 HIST1H1EP10412 219 aaKnown RBP11.87□□□□□ -0.51
SMARCD3-204ENST00000460431 NANOS2P60321 138 aaKnown RBP11.87□□□□□ -0.51
SMARCD3-204ENST00000460431 Q5BKY6 102 aa11.87□□□□□ -0.51
SMARCD3-204ENST00000460431 CEMP1Q6PRD7 247 aaPredicted RBP11.87□□□□□ -0.51
SMARCD3-204ENST00000460431 C1orf158Q8N1D5 194 aa11.87□□□□□ -0.51
SMARCD3-204ENST00000460431 FAM167A-AS1Q96KT0 104 aa11.87□□□□□ -0.51
SMARCD3-204ENST00000460431 TRBV19A0A075B6N1 114 aa11.86□□□□□ -0.51
SMARCD3-204ENST00000460431 JTBO76095 146 aa11.86□□□□□ -0.51
SMARCD3-204ENST00000460431 AMBPP02760 352 aa11.86□□□□□ -0.51
SMARCD3-204ENST00000460431 HIST1H1AQ02539 215 aaPredicted RBP11.86□□□□□ -0.51
SMARCD3-204ENST00000460431 MIR17HGQ75NE6 70 aa11.86□□□□□ -0.51
SMARCD3-204ENST00000460431 IGF2BP2-AS1Q96M15 143 aa11.86□□□□□ -0.51
SMARCD3-204ENST00000460431 AQP10Q96PS8 301 aa11.86□□□□□ -0.51
SMARCD3-204ENST00000460431 SLC25A2Q9BXI2 301 aa11.86□□□□□ -0.51
SMARCD3-204ENST00000460431 MRPL32Q9BYC8 188 aaKnown RBP11.86□□□□□ -0.51
SMARCD3-204ENST00000460431 CRXO43186 299 aaPredicted RBP11.85□□□□□ -0.51
SMARCD3-204ENST00000460431 PYYP10082 97 aa11.85□□□□□ -0.51
SMARCD3-204ENST00000460431 PRB4P10163 310 aaPredicted RBP11.85□□□□□ -0.51
SMARCD3-204ENST00000460431 PDE6HQ13956 83 aa11.85□□□□□ -0.51
SMARCD3-204ENST00000460431 SPINK13Q1W4C9 94 aa11.85□□□□□ -0.51
SMARCD3-204ENST00000460431 PHLDA1Q8WV24 401 aaPredicted RBP11.85□□□□□ -0.51
SMARCD3-204ENST00000460431 GOLT1BQ9Y3E0 138 aa11.85□□□□□ -0.51
SMARCD3-204ENST00000460431 IGHV3OR16-12A0A075B7B8 117 aa11.84□□□□□ -0.51
SMARCD3-204ENST00000460431 PRAC2D3DTV9 90 aa11.84□□□□□ -0.51
SMARCD3-204ENST00000460431 M0R2Z0 102 aa11.84□□□□□ -0.51
SMARCD3-204ENST00000460431 NDUFB4O95168 129 aa11.84□□□□□ -0.51
SMARCD3-204ENST00000460431 RHOBP62745 196 aa11.84□□□□□ -0.51
SMARCD3-204ENST00000460431 FFAR4Q5NUL3 377 aa11.84□□□□□ -0.51
SMARCD3-204ENST00000460431 FUT9Q9Y231 359 aa11.84□□□□□ -0.51
SMARCD3-204ENST00000460431 EPPK1P58107 5090 aaKnown RBP11.83□□□□□ -0.52
SMARCD3-204ENST00000460431 BOLA2-SMG1P6H3BVE0 249 aa11.83□□□□□ -0.52
SMARCD3-204ENST00000460431 MRPL53Q96EL3 112 aaKnown RBP11.83□□□□□ -0.52
SMARCD3-204ENST00000460431 OR51M1Q9H341 326 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms