RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 MYOM3Q5VTT5 1437 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 A0A0G2JMM0 328 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 A0A1W2PPB8 328 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 OR2T8A6NH00 312 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 KIR3DP1A8MWS1 328 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 A8MWV9 139 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 UBFD1O14562 309 aaKnown RBP2.46□□□□□ -2.02
CCDC50-203ENST00000460064 CDC42EP2O14613 210 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 SOD1P00441 154 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 NPPCP23582 126 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 HLA-DMBP28068 263 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 ZNF93P35789 620 aaPredicted RBP2.46□□□□□ -2.02
CCDC50-203ENST00000460064 S100A10P60903 97 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 UBE2BP63146 152 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 EIF5AP63241 154 aaKnown RBP2.46□□□□□ -2.02
CCDC50-203ENST00000460064 BTG2P78543 158 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 ZNF117Q03924 483 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 RPL18Q07020 188 aaKnown RBP2.46□□□□□ -2.02
CCDC50-203ENST00000460064 LINC00471Q8N535 108 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 PLPP5Q8NEB5 264 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 CIB3Q96Q77 187 aaPredicted RBP2.46□□□□□ -2.02
CCDC50-203ENST00000460064 SNRNP25Q9BV90 132 aaKnown RBP2.46□□□□□ -2.02
CCDC50-203ENST00000460064 TTTY13Q9BZ97 58 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 C11orf1Q9H5F2 150 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 SLC39A9Q9NUM3 307 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 CCDC167Q9P0B6 97 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 MPC1Q9Y5U8 109 aa2.46□□□□□ -2.02
CCDC50-203ENST00000460064 MYOM2P54296 1465 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 SBF1O95248 1867 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 RGS12O14924 1447 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 NAIPQ13075 1403 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 FNDC10F2Z333 226 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 NDUFB3O43676 98 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 LY6HO94772 140 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 CD2P06729 351 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 CD14P08571 375 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 GZMBP10144 247 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 CCL5P13501 91 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 HLA-DRB4P13762 266 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 HIST1H1DP16402 221 aaKnown RBP2.45□□□□□ -2.02
CCDC50-203ENST00000460064 TPPP2P59282 170 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 YPEL3P61236 119 aaPredicted RBP2.45□□□□□ -2.02
CCDC50-203ENST00000460064 CATR1Q13166 79 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 ZNF767PQ75MW2 155 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 TEN1Q86WV5 123 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 BPIFA4PQ86YQ2 179 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 C10orf126Q8N4M7 172 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 C3orf56Q8N813 242 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 C5orf17Q8NAS9 161 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 MIEN1Q9BRT3 115 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 COMMD3Q9UBI1 195 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 IER3IP1Q9Y5U9 82 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 HLA-DRB4X5D2U9 266 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 A2ML1A8K2U0 1454 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 CEP164Q9UPV0 1460 aa2.45□□□□□ -2.02
CCDC50-203ENST00000460064 DSCAMO60469 2012 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 KDM6AO15550 1401 aaPredicted RBP2.44□□□□□ -2.02
CCDC50-203ENST00000460064 NUP210LQ5VU65 1888 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 A0A0J9YW62 118 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 NDUFB2O95178 105 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 TNFP01375 233 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 MYL5Q02045 173 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 FOXF1Q12946 379 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 SPANXN3Q5MJ09 141 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 IZUMO2Q6UXV1 221 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 TMEM91Q6ZNR0 172 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 MORN4Q8NDC4 146 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 NPCDR1Q9BY65 106 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 OSTCQ9NRP0 149 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 TAS2R8Q9NYW2 309 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 EPDR1Q9UM22 224 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 V9GYS6 101 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 ARHGAP35Q9NRY4 1499 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 ATG2AQ2TAZ0 1938 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 MAST2Q6P0Q8 1798 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 UBR2Q8IWV8 1755 aa2.44□□□□□ -2.02
CCDC50-203ENST00000460064 KIAA1107Q9UPP5 1409 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 A0A0J9YX75 114 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 H3BQF6 201 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 C19orf84I3L1E1 186 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 UQCRQO14949 82 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 HIST1H2BKO60814 126 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 PITX3O75364 302 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 KLF7O75840 302 aaPredicted RBP2.43□□□□□ -2.02
CCDC50-203ENST00000460064 HIST1H2BJP06899 126 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 RPL27AP46776 148 aaKnown RBP2.43□□□□□ -2.02
CCDC50-203ENST00000460064 TMEM258P61165 79 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 SNRPD3P62318 126 aaKnown RBP2.43□□□□□ -2.02
CCDC50-203ENST00000460064 PYY3Q5JQD4 70 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 FOXI2Q6ZQN5 318 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 AAED1Q7RTV5 226 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 SLC35E3Q7Z769 313 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 YPEL2Q96QA6 119 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 RERGLQ9H628 205 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 RPRMQ9NS64 109 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 DNAJC15Q9Y5T4 150 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 MINOS1-NBL1R4GNA1 71 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 BAZ1AQ9NRL2 1556 aaPredicted RBP2.43□□□□□ -2.02
CCDC50-203ENST00000460064 AKAP12Q02952 1782 aa2.43□□□□□ -2.02
CCDC50-203ENST00000460064 ANKRD31Q8N7Z5 1873 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms